Gene Details:
- Gene ID: A02p056920.1_BraROA
- Suggest Gene Name: HISTONE DEACETYLASE 5
- Description: putative flowering gene
- Species: Brassica rapa ro18
- Source: Putative flowering gene from PlantCFG
Protein Features:
- Pfam: PF00850
Functional Descriptions:
- Encodes a member of the histone deacetylase family.
Homologous
- Arabidopsis thaliana — AT5G61060
Sequences:
gDNA Sequence
- >A02p056920.1_BraROA
TACATGACTTTCTTGGCCTTCTTGGGAAGCTTGCGGTGCAAGTTAAGATCAATTTGGACATCTCTCAGCTCGCTGCGAACTTTGGCCAGATGCTCAGCGGCCTCCTTCACCTCCGCTGCATATCTGTCTCGTGAGATTCGAAGACGCAACTTATCGCTAGCCTCCTGCTGCAGTTCAGCTTCAAGCTTAAGGACCCGTCCCTCCAGCAACTTCTTCTCCTCGCCAGCCTTCTTGAAAAGCTCACGCTGAAAGTCAAGGTCGATCTTGGCCTCTCTCAGTTCGCTGGAAACTTGCGTCAGTTGCTCAGCGGCCTCCTTTGCCTCCGCTGCATATTTGTCTTGAAGGCGCAACTTCTCGCCTTGCAGTTCAACCACCTTGGTCTGTAGCGCCGCCTTTTCTTCCAAGGCCACCTCCAAGGAAGCACGCAAGCTCTCGGCTTGCTTTTTATAACGGATGGAGAGAATTGTGAGCTTAGCCTCTCTAATGCACCTCTAATAAGCGGACAAACAAACTCACATCAGACTCTGAGGATAAGAAGTTGAGAGAGGGAAGCAGCTTACCTCCTGAATAAAAGTGCTCTCTAGAACTTCTTCTCCGTCGTCGCTACTACTACAGTACTACTGCTTGTCTTGAATAAAGAAGTTTGTGCAGAAGCAAAGTTAAGGAGACAATGAAGAAAATGGACAAAAAGAGAAAGGTGCTTAACTGGACTACTAGGAGTTTTTGCCTCCCACGGTAACTCATCTGCAAGTGAAGGCCAGTATGCGCATAGCCTCTTGCGTACCTAAAACGCACAAAGAAGCATATGAGTCTTTGTCAAACTAGTGCCAACTAGTAATAAGATGATATACCGCTTCTATGACACGACATGTAGACTCATATGGGTATTCTTCAAAGGAATCTTGAATTTGTTTCTCTTCAAGCAAAACTTGGACACACGCCAGTGAAGACTTTGCAACTGACCCAAGATTGTACCCTCCCTCTAATGCCATCACAATCTTTCCTTGTGCAAACTCCATCAGCTGAGAGATAACATATTGAAGAAGCTCAGGGCTAAAGAACCAAGCCAAACCAATCAGTACACTAAACACAACGCAAACCTTCTTCAACATAACTGAATATCCATATGGTGTAACAAAACAACCCCCACGCGGATCACCAATAGCTGTTTTAAGAGGAGGAGGTTTAAAAGGTTAAACAGACAAACAACTCTTAAGATGACATATTCATGCAATACTTCAAAAATAACCTGCATCAAATCCAGCTGAAAGAAAAATAAGATCAGGATTAAACTCTTTGGTCACAGGAATCAAGATATGGTCCCATACAGCAATATAATCTTCATCTCCACATCTTCTTCCTTGCTCCCATGGAACGTTTATGTTAAACCCTTCCCCTGCTCCTTCCCCAACCTTGTCATAATCTCCATCATCTCCCGTTGGATAGAAGCTTCCACCATCATGCCTAGTCCCAAATGCATTTCCAGTCAGGTTCCAAGCATAAACATCACATGAAAAATAGGTATAAATTTGGCTACAAGCAGCGCTGAAACACACGGCCACAAACACACATACCTATGAACAGAGAACACTAGTACACGAGGATCTTTCCAGAACATCTTCTGTGTACCGTTTCCGTGATGAACATCCCAATCAACAATCAGAATTTTCTTGACACCTAGATCTGGCTGCATTCAAGAAAAGCAAAAAGAGCTTGGCAACACACTCACCATACAAAAGAACTTTAAAACTATGTTAAAAGGAAATAATAACATTACAAGAGTCAATACAAGTGCTTACTCTTTGGTTTAGTAAATAACTAGCCGCAACTGCAACATTGTTGAATAGACAGAACCCCATGGCTTCATCTGCCTCAGCATGGTGCCCTGGTGGTCTAACAATAGCAAAGCCACAATCTAATTCTCCTTCTGCAACTTTCTCTGCCACCTGTTAAGTTGCAAGGAGATACTGTTAAGTGTTAACTATCCTCCAAGTCATTTATATGCATCTAGTATTACTATTACCTCCACAACAGATCCAGCTGCAAGATACGCCGCTTCTGATGAGCCTCCATTAAGATATATTGAATCCAACTTCGAAGCAATCTTGTTTCTCCGAGAATCTTTCTTCTTTGTGCTTAAACTCTTAACTAAATTAACATGTTCCTTTGTGTGAACCAGTTGAAGATGCTTATCTTCCGCTTTGCTACCACCAAGAACCACACATCTACAAGGAAGAAAGGCAAAAACTTTCTTATAAGCAAAACAACTAACAGCAAAGCAGCACGAGAAGGAAGAGAAAAGTAGGAACCTTTGAGCGAGACCAGTGCGCTGAAGCATCTCCCAGATAGCTTTGATGCGATTAGGACACTCGGGATGGTCATCACCGTCAGGTGTGTCGTGTTTGCACATCCTCTCGTCGTATAAAAGACCAACCTTTCTCTTTCTTGATTCGCCGGCCAT
CDS Sequence
- >A02p056920.1_BraROA
ATGGCCGGCGAATCAAGAAAGAGAAAGGTTGGTCTTTTATACGACGAGAGGATGTGCAAACACGACACACCTGACGGTGATGACCATCCCGAGTGTCCTAATCGCATCAAAGCTATCTGGGAGATGCTTCAGCGCACTGGTCTCGCTCAAAGATGTGTGGTTCTTGGTGGTAGCAAAGCGGAAGATAAGCATCTTCAACTGGTTCACACAAAGGAACATGTTAATTTAGTTAAGAGTTTAAGCACAAAGAAGAAAGATTCTCGGAGAAACAAGATTGCTTCGAAGTTGGATTCAATATATCTTAATGGAGGCTCATCAGAAGCGGCGTATCTTGCAGCTGGATCTGTTGTGGAGGTGGCAGAGAAAGTTGCAGAAGGAGAATTAGATTGTGGCTTTGCTATTGTTAGACCACCAGGGCACCATGCTGAGGCAGATGAAGCCATGGGGTTCTGTCTATTCAACAATGTTGCAGTTGCGGCTAGTTATTTACTAAACCAAAGACCAGATCTAGGTGTCAAGAAAATTCTGATTGTTGATTGGGATGTTCATCACGGAAACGGTACACAGAAGATGTTCTGGAAAGATCCTCGTGTACTAGTGTTCTCTGTTCATAGGCATGATGGTGGAAGCTTCTATCCAACGGGAGATGATGGAGATTATGACAAGGTTGGGGAAGGAGCAGGGGAAGGGTTTAACATAAACGTTCCATGGGAGCAAGGAAGAAGATGTGGAGATGAAGATTATATTGCTGTATGGGACCATATCTTGATTCCTGTGACCAAAGAGTTTAATCCTGATCTTATTTTTCTTTCAGCTGGATTTGATGCAGCTATTGGTGATCCGCGTGGGGGTTGTTTTGTTACACCATATGGATATTCAGTTATGTTGAAGAAGGTTTGCGTTGTGTTTAGTGTACTGATTGGTTTGGCTTGGTTCTTTAGCCCTGAGCTTCTTCAATATGTTATCTCTCAGCTGATGGAGTTTGCACAAGGAAAGATTGTGATGGCATTAGAGGGAGGGTACAATCTTGGGTCAGTTGCAAAGTCTTCACTGGCGTGTGTCCAAGTTTTGCTTGAAGAGAAACAAATTCAAGATTCCTTTGAAGAATACCCATATGAGTCTACATGTCGTGTCATAGAAGCGGTACGCAAGAGGCTATGCGCATACTGGCCTTCACTTGCAGATGAGTTACCGTGGGAGGCAAAAACTCCTAGTAGTCCAAGGTGCATTAGAGAGGCTAAGCTCACAATTCTCTCCATCCGTTATAAAAAGCAAGCCGAGAGCTTGCGTGCTTCCTTGGAGGTGGCCTTGGAAGAAAAGGCGGCGCTACAGACCAAGGTGGTTGAACTGCAAGGCGAGAAGTTGCGCCTTCAAGACAAATATGCAGCGGAGGCAAAGGAGGCCGCTGAGCAACTGACGCAAGTTTCCAGCGAACTGAGAGAGGCCAAGATCGACCTTGACTTTCAGCGTGAGCTTTTCAAGAAGGCTGGCGAGGAGAAGAAGTTGCTGGAGGGACGGGTCCTTAAGCTTGAAGCTGAACTGCAGCAGGAGGCTAGCGATAAGTTGCGTCTTCGAATCTCACGAGACAGATATGCAGCGGAGGTGAAGGAGGCCGCTGAGCATCTGGCCAAAGTTCGCAGCGAGCTGAGAGATGTCCAAATTGATCTTAACTTGCACCGCAAGCTTCCCAAGAAGGCCAAGAAAGTCATGTAG
Protein Sequence
- >A02p056920.1_BraROA
MAGESRKRKVGLLYDERMCKHDTPDGDDHPECPNRIKAIWEMLQRTGLAQRCVVLGGSKAEDKHLQLVHTKEHVNLVKSLSTKKKDSRRNKIASKLDSIYLNGGSSEAAYLAAGSVVEVAEKVAEGELDCGFAIVRPPGHHAEADEAMGFCLFNNVAVAASYLLNQRPDLGVKKILIVDWDVHHGNGTQKMFWKDPRVLVFSVHRHDGGSFYPTGDDGDYDKVGEGAGEGFNINVPWEQGRRCGDEDYIAVWDHILIPVTKEFNPDLIFLSAGFDAAIGDPRGGCFVTPYGYSVMLKKVCVVFSVLIGLAWFFSPELLQYVISQLMEFAQGKIVMALEGGYNLGSVAKSSLACVQVLLEEKQIQDSFEEYPYESTCRVIEAVRKRLCAYWPSLADELPWEAKTPSSPRCIREAKLTILSIRYKKQAESLRASLEVALEEKAALQTKVVELQGEKLRLQDKYAAEAKEAAEQLTQVSSELREAKIDLDFQRELFKKAGEEKKLLEGRVLKLEAELQQEASDKLRLRISRDRYAAEVKEAAEHLAKVRSELRDVQIDLNLHRKLPKKAKKVM