Information report for A02p051100.1_BraROA
Gene Details
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Functional Annotation
- encodes a component of the FAcilitates Chromatin Transcription (FACT) complex, SSRP1. Along with STP16 binds to the promoter of FLC.
Homologous
- Arabidopsis thaliana — AT3G28730
Gene Resources
- Pfam: PF00505 PF17292 PF08512 PF03531
- UniProt: A0A078EWY5
- RefSeq: XP_013666622.1 , XP_013717889.1
- EMBL: HG994356 , HG994366 , LK032704
- AlphaFoldDB: A0A078EWY5
- KEGG: bna:106421606
- OMA: QVVTKIF
- InterPro: IPR000969 , IPR009071 , IPR011993 , IPR013719 , IPR024954 , IPR035417 , IPR036910 , IPR038167 , IPR048993 , IPR050454
- PANTHER: PTHR45849 , PTHR45849:SF1
- SUPFAM: SSF47095 , SSF50729
- PROSITE: PS50118
- Gene3D: 1.10.30.10 , 2.30.29.150 , 2.30.29.220 , 2.30.29.30
- OrthoDB: A0A078EWY5
- SMR: A0A078EWY5
- CDD: cd13230 , cd13231 , cd22013
- STRING: 3708.A0A078EWY5
Sequences
gDNA Sequence
- >A02p051100.1_BraROA
TGACGGACGTTCATTCCTTCAACAACATCTCCCTCAGTGGCCGCGGCGGATCGGTTCGTTCCTCCCTTATTCTCTTAGGATCTTTCTCTTCCTCTAGGGGTGTCTCCCTATTCCTCTCGCTTCGAAACCCTAATTTAGTTTCCCTCGTTTGATTATGATGGTAACTGTAGAATCCTGGACTCCTTAAGATCAACTCAGGAGGGATTCAATGGAAGAAGCAAGGCGGCGGCAAAGCTGTGGAGGTCGACAAATCGGACATCGTGGGCGTGAGCTGGATGAAGGTTCCGAGGACTAACCAGCTTGGTGTCAAAACCAAAGATGGGTTGTACTATAAGTTCATTGGCTTTCGTGATCAGGTTTTGCTACCAATATTATCTTCTTGTTCTTTGATTGAAAGTTATATTATGTTCATGCTTATGTGTTGTGTGTTTTGTTTGGTGGGATAGGATGTTGCGAGCCTGACCAGCTTTTTCCAAAGTGCGTTTGGGAAAACGCCTGAAGAGAAACAGCTCTCTGTTAGTGGTCGCAATTGGGGTGAGGTTGATTTGAATGGTGAGTTCTTTAACTCCTTATTCTGTGTGTTCTCCTCCTCTTAACTGACTGTTTTCTAGGTTTTTTAGTGGGAAAGAATCATACTTTGGTTGAGTTTGGTCGGAAAGAATCATAATTTGCTTGAGTATAAGCTTCTTTAGTCTTCTTAAGTGAAAAAGGTTTTAGCTTTATTCGTTTTCTTTTGTGCAGGGAATAATTTAACCTTTTTGGTTGGTGGGAAGCAAGCTTTTGAAGTGTCTCTGGCTGATGTGTCACAGACTCAGCTTCAAGGGAAGAATGACGTCTTGTTGGAGTTTCATGTTGATGATACTGCGGGTGCCAATGAGGTATGTTTCTCCTTTGAAAATGCAGTCTAGCTGAGTTACTGATTCTGTTATTATGTATTTATAGAAAGACTCGTTGATGGAGATAAGTTTTCATATTCCTAATACCAACACCCAGTTTGTTGGTGATGAAACTCGCCCACCTGCTCAAGTAAGTTGATTGAAGTTTTTTTCCTTAATTATATGGGTGTGTCTTTTTGTATGTTGATCCTAAGAGCATGTCTTAGGTTTTCCATGACAATATCTTGAAAGTGGCTGACGTTGGTGCTGGAGTTGAGGAGGCTGTCGTCACATTTGAGGGTATTGCAATCCTCACTCCCAGGTAAAGATTTTTCCTTACATCGTATCTTTACTGTTAAGAGTATTAGTTGATTACTCTAGCATTTGTTGCTACTGTGTGTTGCTGAATCATCTCATGAATACATGATTGGTTTTTTCTTTCACAGGGGTCGGTACAATGTGGAGCTTCACCTTTCTTTCTTACGCTTGCAAGGACAAGCCAATGACTTTAAGATTCAATACAGTAGTGTTGTCCGCTTGTTTTTGCTTCCAAAGGTAATTCTTTTTAATCGTATCTAAGGGACTTTTACTTGTTTTCACTGACTCTTATACCTATTAATGGAACTCTTGTTATCTGTTTTGTGCCTGCGCAGTCAAACCAGCCACACACGTTTGTTGTTATATCTCTAGACCCACCAATCCGGAAAGGTCAGACCCTGTACCCCCATATTGTGATGCAGGTAAACATTACTTTTATTTTCCCTTTCATATCAATCTTCTTTTAGAAGTTTGTTTCTTTAACCGTTTCAATCTGTTTTTCTCCACCTTCTTTAGTTTGAGACAGACTCCGTGGTCGAAAGTGAACTCTCAATTAGTGATGATCTTATGAATACAAGGTTCAAGGACAAGTTGGAGCGATCATATAAGGTCTCTTGTCTGGTCTCCGCTTATTTTATAGTTCCTTTATAAAAAAATCTATATACACTGATTGCTAAGGATATTGGCTATTATGAATTTTTCAGGGTCTCATACATGAAGTGTTCACCACCGTGTTGCGTTGGCTGTCTGGTGCAAAGATCACTAAACCAGGGAAGTTCCGCAGTTCCCAAGATGGGTTTGCAGTGAAATCATCTCTCAAGGCCGAAGATGGTGTTCTCTATCCCCTCGAGAAGGGATTTTTCTTTTTACCTAAACCTCCAACGCTTATACTTCATGATGAGGTATTCTGTGGTTATTAATGATTGGGAAAATTTTGATATATAGTTGGTTTGTTTAAACCGTTTGTTTTTTTAATTTTTGTAGATTGACTATGTGGAGTTTGAAAGGCATGCTGCTGGCGGTGCTAACATGCATTACTTCGATCTTTCCATAAGACTGAAAACTGATCATGAACATCTCTTCCGGAATATTCAGAGGAATGAGTATCACAATCTCTATTCCTTCATAAGGTTTGTATCTCAGCATCAACGTTCTTGAAATGAACGGTAGTGAATAAAACATCATCCTTCTTTTGATGCCAGCTCTAAGGGATTGAAGATCATGAACCTTGGAGGTGCGGGTACCGCAGAGGGTGTTGCTGCTGTTCTCCAGGATAATGATGATGACGATGCTGTTGACCCTCATCTTGAGCGTATCAGAAACCAAGCTGCTGATGAGAGTGATGAGGAGGACGAAGACTTTGTCGGGGCTGAGGATGACGACGGTGGCTCACCGACTGATGATTCTGGCGAGGACGACGACTCTGATGCTAGTGACGCTGACGGAGGCGAGAAAGAGGTTAAAACTGTTTTCATATTCCTTCAATCAAACTCTTTCATAAGTGAAGCCATATCTTATTTTTATTCCTTCTTTAGAAATCTGTTAAGAAGGAGCCCAAGAAAGAGGCTTCGTCTTCGAAAGGATTGCCCTTAAAGAAGAAAGCGTTGGCGACAGAAGAAGGAAGTAGTAAGAAGAAGACGCAGAAGAAGAAGAAGGATCCCAATGCACCTAAGAAGGCAATGTCTGGTTTCATGTACTTCTCCCAAATGGAAAGAGACGTGAGTTCTCTTCTCTCCTTTGTCTTACATTTCACTCTTAGGCAATGTCTGATTGTTGTATCGTTTTCACTTAACAGAACATAAAGAAGAGTAACCCAGGAATAGGATTTGGAGATATAGGAAAGGTGCTTGGAGATAAGTGGCGTCAGATGTCTGGTAAGATCTTCCCTTAAAAAACTCTACATTTCTTGGTCTTAGCTTCATCGTCTTTGTGTGTGTTTTATGTAAACCATAGCTGAGGAAAAAGAGCCGTATGAAGCTAAGGCGCAAGTTGACAAGAAGCGATACAAGGATGAGATTAGTGATTACAAGAACCCTCAGCCCATGCTTGTAGACTCTGGAAACGATTCCGACAGTAACTAA
CDS Sequence
- >A02p051100.1_BraROA
ATGACGGACGTTCATTCCTTCAACAACATCTCCCTCAGTGGCCGCGGCGGATCGAATCCTGGACTCCTTAAGATCAACTCAGGAGGGATTCAATGGAAGAAGCAAGGCGGCGGCAAAGCTGTGGAGGTCGACAAATCGGACATCGTGGGCGTGAGCTGGATGAAGGTTCCGAGGACTAACCAGCTTGGTGTCAAAACCAAAGATGGGTTGTACTATAAGTTCATTGGCTTTCGTGATCAGGATGTTGCGAGCCTGACCAGCTTTTTCCAAAGTGCGTTTGGGAAAACGCCTGAAGAGAAACAGCTCTCTGTTAGTGGTCGCAATTGGGGTGAGGTTGATTTGAATGGGAATAATTTAACCTTTTTGGTTGGTGGGAAGCAAGCTTTTGAAGTGTCTCTGGCTGATGTGTCACAGACTCAGCTTCAAGGGAAGAATGACGTCTTGTTGGAGTTTCATGTTGATGATACTGCGGGTGCCAATGAGAAAGACTCGTTGATGGAGATAAGTTTTCATATTCCTAATACCAACACCCAGTTTGTTGGTGATGAAACTCGCCCACCTGCTCAAGTTTTCCATGACAATATCTTGAAAGTGGCTGACGTTGGTGCTGGAGTTGAGGAGGCTGTCGTCACATTTGAGGGTATTGCAATCCTCACTCCCAGGGGTCGGTACAATGTGGAGCTTCACCTTTCTTTCTTACGCTTGCAAGGACAAGCCAATGACTTTAAGATTCAATACAGTAGTGTTGTCCGCTTGTTTTTGCTTCCAAAGTCAAACCAGCCACACACGTTTGTTGTTATATCTCTAGACCCACCAATCCGGAAAGGTCAGACCCTGTACCCCCATATTGTGATGCAGTTTGAGACAGACTCCGTGGTCGAAAGTGAACTCTCAATTAGTGATGATCTTATGAATACAAGGTTCAAGGACAAGTTGGAGCGATCATATAAGGGTCTCATACATGAAGTGTTCACCACCGTGTTGCGTTGGCTGTCTGGTGCAAAGATCACTAAACCAGGGAAGTTCCGCAGTTCCCAAGATGGGTTTGCAGTGAAATCATCTCTCAAGGCCGAAGATGGTGTTCTCTATCCCCTCGAGAAGGGATTTTTCTTTTTACCTAAACCTCCAACGCTTATACTTCATGATGAGATTGACTATGTGGAGTTTGAAAGGCATGCTGCTGGCGGTGCTAACATGCATTACTTCGATCTTTCCATAAGACTGAAAACTGATCATGAACATCTCTTCCGGAATATTCAGAGGAATGAGTATCACAATCTCTATTCCTTCATAAGCTCTAAGGGATTGAAGATCATGAACCTTGGAGGTGCGGGTACCGCAGAGGGTGTTGCTGCTGTTCTCCAGGATAATGATGATGACGATGCTGTTGACCCTCATCTTGAGCGTATCAGAAACCAAGCTGCTGATGAGAGTGATGAGGAGGACGAAGACTTTGTCGGGGCTGAGGATGACGACGGTGGCTCACCGACTGATGATTCTGGCGAGGACGACGACTCTGATGCTAGTGACGCTGACGGAGGCGAGAAAGAGAAATCTGTTAAGAAGGAGCCCAAGAAAGAGGCTTCGTCTTCGAAAGGATTGCCCTTAAAGAAGAAAGCGTTGGCGACAGAAGAAGGAAGTAGTAAGAAGAAGACGCAGAAGAAGAAGAAGGATCCCAATGCACCTAAGAAGGCAATGTCTGGTTTCATGTACTTCTCCCAAATGGAAAGAGACAACATAAAGAAGAGTAACCCAGGAATAGGATTTGGAGATATAGGAAAGGTGCTTGGAGATAAGTGGCGTCAGATGTCTGCTGAGGAAAAAGAGCCGTATGAAGCTAAGGCGCAAGTTGACAAGAAGCGATACAAGGATGAGATTAGTGATTACAAGAACCCTCAGCCCATGCTTGTAGACTCTGGAAACGATTCCGACAGTAACTAA
Protein Sequence
- >A02p051100.1_BraROA
MTDVHSFNNISLSGRGGSNPGLLKINSGGIQWKKQGGGKAVEVDKSDIVGVSWMKVPRTNQLGVKTKDGLYYKFIGFRDQDVASLTSFFQSAFGKTPEEKQLSVSGRNWGEVDLNGNNLTFLVGGKQAFEVSLADVSQTQLQGKNDVLLEFHVDDTAGANEKDSLMEISFHIPNTNTQFVGDETRPPAQVFHDNILKVADVGAGVEEAVVTFEGIAILTPRGRYNVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVISLDPPIRKGQTLYPHIVMQFETDSVVESELSISDDLMNTRFKDKLERSYKGLIHEVFTTVLRWLSGAKITKPGKFRSSQDGFAVKSSLKAEDGVLYPLEKGFFFLPKPPTLILHDEIDYVEFERHAAGGANMHYFDLSIRLKTDHEHLFRNIQRNEYHNLYSFISSKGLKIMNLGGAGTAEGVAAVLQDNDDDDAVDPHLERIRNQAADESDEEDEDFVGAEDDDGGSPTDDSGEDDDSDASDADGGEKEKSVKKEPKKEASSSKGLPLKKKALATEEGSSKKKTQKKKKDPNAPKKAMSGFMYFSQMERDNIKKSNPGIGFGDIGKVLGDKWRQMSAEEKEPYEAKAQVDKKRYKDEISDYKNPQPMLVDSGNDSDSN