Gene Details:
- Gene ID: A02p031730.1_BraROA
- Suggest Gene Name: MODIFIER OF SNC1,3, NUP96, SUPPRESSOR OF AUXIN RESISTANCE 3
- Description: putative flowering gene
- Species: Brassica rapa ro18
- Source: Putative flowering gene from PlantCFG
Protein Features:
Functional Descriptions:
- Mutant has early-flowering phenotype, encodes a putative nucleoporin. Required for the activation of downstream defense pathways by the snc1 mutation. Involved in basal resistance against bacterial pathogens.
Homologous
- Arabidopsis thaliana — AT1G80680
Sequences:
gDNA Sequence
- >A02p031730.1_BraROA
TAAGCTGATGTTTGGTGGCCTGTCTCTGAGAGATATAGAGAGAAGAGAGAGACAGCATCTTTCAGATGAGATGATCTTACATCTTCTGGTAATGGAGCTTTGAAGGCTGTCATAAAACAGCTTAGCTGAGAGTCTCTATCAGGATACACACTCAGACCTGATAGAAGCAACTCGCAGATTTCCTCTGCCATCTTTGTGTATGCGACTCTGCAGCCATACCAAGAGAGTTTGTACGTTAAGTGTAGTGTGTTGTAACCAAATTTAATAAAATGCTTTTGGTGAATCAATTTAGAATGCGTGTGAGATGTTTGACCCGTATCTGTCCACACAGCAAACTTGAGTTATGTAGTCATCAGAAGCCAACTGCCTTAGTTTAGGAGCAATTACTATGGATACCACCAAATTTAGAAGGATCCATCCAAAACTGCTCCATTATGTATTACTTTCTAGGTTATTAATATGTAAGACGAGGTCTACCTAGTAGGATCTTATACAATGCAGTGGAAAATATGAATGAACAAGGAACAAACAAGTGCATGCAAGTAGTGACTAGTTCTTAAGCTACTGGCAAGTGTGAGATATATGGAGTACGTACCTGGCTTCAACCGGTAATCTATCACCCCAAACAGCCAATGACTCGTTTAAACGACCGACAAAACTTCTGCACGACTCGTTTTTGCTCTCAGGGGAATCCTGCCGAAGCAAAAGTTGTGTTGTTCATGTCATGCATGTAATTCACACATCAAGAAAACGATCATATATCATCATTTCCATGAGCATAGGGAATTGAAAGCAATTTCGTTGAGTATCAGTACAAGATTTAAGCAGCTGCCTAACTAAAGTTTAAGCAATTTGAGAGCTCTACGAGTTGAATCTCAAATATAAAGATTATCACGACATAGACGTACCAGTTCTAGCATTGTATCAGCATCTTCTTCCAGTGAACTCTTTAGTAAATAAAATGACATGTAAATCCCAGCACCCAGGTCCCAGTTTTCAATCTCAGACTTGCGGTCGTCCATTGAAGTAGCAATTCTCCATATTTCTGAGTGGTTAGCTGCATTTATTAAAGATAAAACAGATCAATCCAAACAGATCGTTCCTACACTGGACCGGAATCGTGTTCCAGTTGAGCAATTGGGTCTGCACCATAAGGAAATGAAGAAGCTTACCTGACAAAAACAATGAATGAGCAACTGATGTCATAAAAATGGAATGAGCTCTTTGCCAGTTAGCGCATTCGATAAAGTGGTCAAGAGCCTTTACGAAATCTCCATGGTAATTGTAATAAACTGCCTGCAACAGAGGCAAAAACAAACAGCAATCAGCATATCAGTATAAGATGGAAAACGGTTTTGAATAGTGTGCTTACCAGAGCTTCGTGCATCCATTCAGAAGGGATACCCAAGTTCTTGATAAATTGCCGCTGTGATTCCACAGAACTCCAAGTTTCACAGAACTGAAACAGGATTTCCCGAATGACGGTGAAGTGTAGATATGGACGGTCTTTGCGGTAGGGCATGTGAAGAACAACGTAGATAGCCCAATGACAAAGGCCCTGAGAGAGAAGCTGTGCAACAAATCCCATATCGAGAGCATGGAGGTCATCTGAAGTGAAGGCTCCAACTGCTTCTAAGATTCCTCGCTGGTGCCAGATCATATGATAGTCAAGTGGGTCGTCAGTTGAAGAGAAGGCACTGAACATAGTCTTCAGAAAACCAATTTTTCCCTCTTCTCTGCTGTGCAAAAGCATAAGATAATACAACAGGTCAGAATGCTTGGTGTTGCTTACAATTCCATCTGCTGGTCCTTCATCAATATATATTGGGACTGGCCACGGAGCCTTTCCCTGATCTAGTAGGAGTTGGTAATTTCTGAAGATGACAGGCAAGGAACTGTCTGGAGCCAGATGATGCCACATCAGCAACCCTAGGAATCTCTTCCAGTCAATTGCAACATCTTGTAGTGCATCGTGGATGTTACCAGCAAGCAATTCGTAAAGCTTAATTCTATCCTTTTCAATGTAGTTAAAATCCAGCCCATTCCTTCCCCAAAGGTGAAGCTGCTGCATGATATCATCGCGGTTTACAGTTGATCCACCAACCTGGCTCAACAAACAAGCAAGTCTAACATCTCCCTTAGATATGGCAAGTTCCACAGCTGAATCAAGCTCTCGTCCCGTTAGAAGAAAGAACAAGTGCTTAAGGTAGCCAGAACCATTTAGATCACTCACGTCTTCTTGTACACGGTGACTGACACATTCTTGGAGCCAGCAACTGAATTCTGCTCTTCGGATAAGTGGAAGAGCTTCTGTATCAACTTCCGCAGACTCTTCTTTGACATCTTGCATCATATCTTCCTCATTATCAAAAACTGCATAAGTACTCTGTCTCTCGCAAAAGAGAACTTTTATGAGTTCCCACACCATGACCTGGTGAGTCAAAAAGAGCTTCGCAGAGGTGGACAACCCAGGAAACTCCAGCTGTTTCTCGATTATATCAATATAGTTTCGGCAGATATCTGAAAGAACCACACGATCAGTGACAACTTTCTGAAGTTTAAGACTAAAAGAGCCAAACCTGACTTCTTTTTCTTCTTCACGATACAATACCTTGTGGAGACTTAAGGGAGTCTCAAATGCAGAGTCAATAAGTTCTTTCTGAACTTTTCCCTTTTTATCCCGAACCACCTTGTCAACTGCTATCTTATCTACATTGATCACAGAAGACAATACTCTCTGGGAACTAGAACTGCTTATTGGATTACCAGTGTGAAGAAGCACGCCATTTGGTCCCCAACCTGCACGGAACGACCTTCCCATGAATAATGCTGCATCTACAACATTGCGGGAATAGTTATCAGTTAATGGCGTCTCATGGCTGATGTCCAGCTCGAAACCTCCCATCTTCGACTTTCTGACTGCCAGGTTCTTATTTTGTTGGACCATCAGGATACTGCCTGGGGAGCTTTTATCATTCCCAGGGTTATACTCCAGCAAAGCAAGTGGCGTTTTCCGCACAACCAGTGGAGTATCTTGATGAGTATCTCTTTGAGAATGTTTCTGTGAAGTTCTTGCCCTTCGTTTAGTCAATGATGTCATGGGGAAAGAAGTTTGATCTCCAAACTCCTCACTTTCGTCAATATCTTTCCTAGGAAACATCAGCATTCTCATTTCTTTCATCTTTCCAGGATCAAGTCCTAGATGGGCTGGAAGAGAATGAGAAAGCTCAGACTCAGAAGTTTCCATTTTGTCAACGTCAGCTACCACCATGTCACCATTCAGTCCCACATGATTCTCCAAACGTGGGGCATCATCCATAGTAATATCTGCTGCCTCATCATCACTCAACCCAAATCTGCTGAAATGAGGAACCAAAAACTTCCAGAAACCCATCTCACGAACAAACGAGATGAAAGTTGCCCCTTGTCTTTCAGTAATCTGTTTTAATTTATAAGAAACAAAGCCAGCCCACTCTTCCCCACGAGCTATGTTAACGATCAGAGTGACCTCAGCAGGCTTGTTAAGCCCCTCGCCAAAAGCAGGCTTGGAGCTCTCATCATCATAAACAACCACATCGTGCCTCTGAAACTTAACAATCTGATCCAGGTCCAAGTTTCTAACATCTGTACTTCCAAGAAACTTGATAAAACCGTAACCGATCCTCCCAATGGTGAAATCAGGAACCCGGCTGCAAAAACCAGGGGTTTCAATTTCTCGCTGGACCAGCTCGTTCATGGATGGCTTCAAGAAGTAGTCGGGTGAGTTCAAGGAAGGCAATGAATCTCTGATATCATTTCCATCAAAAAGGATCTTTCTGTGTGAGTCCAAACTTGTAGCCATCGTTGAAATCTCTGTCAACAAAGAGTATAGGGAACTTAAGAGACGACAAGCAATGCAAAGGACACTCCTTTGAAACTTAATGAATCAACTGACCAAGTCGATACAGTGAAAGAAACAATGAATCGCTACAATCAATAGTCTAAAGAGTTACCTGGAGCTTAGAAAGAGACGCCGTGATTGACCACCAAGGTATAGAGAGAGAGAGAGAGAGTCCACCGCTCACGGACGGTGGCGCTGAAGGACGGCGGCGACAGTCTAAAACCCTTCTTCTTCTATCTAAGACGCTGTAGAGAGGGAGGGAGGCAGAGCTCTCAAATTTTGTCAGATCTGCCTGCTTTGGTTAGGATCCGTGGATCCGTTTTGCTACCCGACCCGTTAAACACTAAATAAATATTGGGCCAAAGCCCAATTATAAGGCCCAT
CDS Sequence
- >A02p031730.1_BraROA
ATGGGCCTTATAATTGGGCTTTGGCCCAATATTTATTTAGTGTTTAACGGGTCGGAGATTTCAACGATGGCTACAAGTTTGGACTCACACAGAAAGATCCTTTTTGATGGAAATGATATCAGAGATTCATTGCCTTCCTTGAACTCACCCGACTACTTCTTGAAGCCATCCATGAACGAGCTGGTCCAGCGAGAAATTGAAACCCCTGGTTTTTGCAGCCGGGTTCCTGATTTCACCATTGGGAGGATCGGTTACGGTTTTATCAAGTTTCTTGGAAGTACAGATGTTAGAAACTTGGACCTGGATCAGATTGTTAAGTTTCAGAGGCACGATGTGGTTGTTTATGATGATGAGAGCTCCAAGCCTGCTTTTGGCGAGGGGCTTAACAAGCCTGCTGAGGTCACTCTGATCGTTAACATAGCTCGTGGGGAAGAGTGGGCTGGCTTTGTTTCTTATAAATTAAAACAGATTACTGAAAGACAAGGGGCAACTTTCATCTCGTTTGTTCGTGAGATGGGTTTCTGGAAGTTTTTGGTTCCTCATTTCAGCAGATTTGGGTTGAGTGATGATGAGGCAGCAGATATTACTATGGATGATGCCCCACGTTTGGAGAATCATGTGGGACTGAATGGTGACATGGTGGTAGCTGACGTTGACAAAATGGAAACTTCTGAGTCTGAGCTTTCTCATTCTCTTCCAGCCCATCTAGGACTTGATCCTGGAAAGATGAAAGAAATGAGAATGCTGATGTTTCCTAGGAAAGATATTGACGAAAGTGAGGAGTTTGGAGATCAAACTTCTTTCCCCATGACATCATTGACTAAACGAAGGGCAAGAACTTCACAGAAACATTCTCAAAGAGATACTCATCAAGATACTCCACTGGTTGTGCGGAAAACGCCACTTGCTTTGCTGGAGTATAACCCTGGGAATGATAAAAGCTCCCCAGGCAGTATCCTGATGGTCCAACAAAATAAGAACCTGGCAGTCAGAAAGTCGAAGATGGGAGGTTTCGAGCTGGACATCAGCCATGAGACGCCATTAACTGATAACTATTCCCGCAATGTTGTAGATGCAGCATTATTCATGGGAAGGTCGTTCCGTGCAGGTTGGGGACCAAATGGCGTGCTTCTTCACACTGGTAATCCAATAAGCAGTTCTAGTTCCCAGAGAGTATTGTCTTCTGTGATCAATGTAGATAAGATAGCAGTTGACAAGGTGGTTCGGGATAAAAAGGGAAAAGTTCAGAAAGAACTTATTGACTCTGCATTTGAGACTCCCTTAAGTCTCCACAAGGTATTGTATCGTGAAGAAGAAAAAGAAGTCAGGTTTGGCTCTTTTAGTCTTAAACTTCAGAAAGTTGTCACTGATCGTGTGGTTCTTTCAGATATCTGCCGAAACTATATTGATATAATCGAGAAACAGCTGGAGTTTCCTGGGTTGTCCACCTCTGCGAAGCTCTTTTTGACTCACCAGGTCATGGTGTGGGAACTCATAAAAGTTCTCTTTTGCGAGAGACAGAGTACTTATGCAGTTTTTGATAATGAGGAAGATATGATGCAAGATGTCAAAGAAGAGTCTGCGGAAGTTGATACAGAAGCTCTTCCACTTATCCGAAGAGCAGAATTCAGTTGCTGGCTCCAAGAATGTGTCAGTCACCGTGTACAAGAAGACGTGAGTGATCTAAATGGTTCTGGCTACCTTAAGCACTTGTTCTTTCTTCTAACGGGACGAGAGCTTGATTCAGCTGTGGAACTTGCCATATCTAAGGGAGATGTTAGACTTGCTTGTTTGTTGAGCCAGGTTGGTGGATCAACTGTAAACCGCGATGATATCATGCAGCAGCTTCACCTTTGGGGAAGGAATGGGCTGGATTTTAACTACATTGAAAAGGATAGAATTAAGCTTTACGAATTGCTTGCTGGTAACATCCACGATGCACTACAAGATGTTGCAATTGACTGGAAGAGATTCCTAGGGTTGCTGATGTGGCATCATCTGGCTCCAGACAGTTCCTTGCCTGTCATCTTCAGAAATTACCAACTCCTACTAGATCAGGGAAAGGCTCCGTGGCCAGTCCCAATATATATTGATGAAGGACCAGCAGATGGAATTGTAAGCAACACCAAGCATTCTGACCTGTTGTATTATCTTATGCTTTTGCACAGCAGAGAAGAGGGAAAAATTGGTTTTCTGAAGACTATGTTCAGTGCCTTCTCTTCAACTGACGACCCACTTGACTATCATATGATCTGGCACCAGCGAGGAATCTTAGAAGCAGTTGGAGCCTTCACTTCAGATGACCTCCATGCTCTCGATATGGGATTTGTTGCACAGCTTCTCTCTCAGGGCCTTTGTCATTGGGCTATCTACGTTGTTCTTCACATGCCCTACCGCAAAGACCGTCCATATCTACACTTCACCGTCATTCGGGAAATCCTGTTTCAGTTCTGTGAAACTTGGAGTTCTGTGGAATCACAGCGGCAATTTATCAAGAACTTGGGTATCCCTTCTGAATGGATGCACGAAGCTCTGGCAGTTTATTACAATTACCATGGAGATTTCGTAAAGGCTCTTGACCACTTTATCGAATGCGCTAACTGGCAAAGAGCTCATTCCATTTTTATGACATCAGTTGCTCATTCATTGTTTTTGTCAGCTAACCACTCAGAAATATGGAGAATTGCTACTTCAATGGACGACCGCAAGTCTGAGATTGAAAACTGGGACCTGGGTGCTGGGATTTACATGTCATTTTATTTACTAAAGAGTTCACTGGAAGAAGATGCTGATACAATGCTAGAACTGGATTCCCCTGAGAGCAAAAACGAGTCGTGCAGAAGTTTTGTCGGTCGTTTAAACGAGTCATTGGCTGTTTGGGGTGATAGATTACCGGTTGAAGCCAGAGTCGCATACACAAAGATGGCAGAGGAAATCTGCGAGTTGCTTCTATCAGGTCTGAGTGTGTATCCTGATAGAGACTCTCAGCTAAGCTGTTTTATGACAGCCTTCAAAGCTCCATTACCAGAAGATGTAAGATCATCTCATCTGAAAGATGCTGTCTCTCTCTTCTCTCTATATCTCTCAGAGACAGGCCACCAAACATCAGCTTAG
Protein Sequence
- >A02p031730.1_BraROA
MGLIIGLWPNIYLVFNGSEISTMATSLDSHRKILFDGNDIRDSLPSLNSPDYFLKPSMNELVQREIETPGFCSRVPDFTIGRIGYGFIKFLGSTDVRNLDLDQIVKFQRHDVVVYDDESSKPAFGEGLNKPAEVTLIVNIARGEEWAGFVSYKLKQITERQGATFISFVREMGFWKFLVPHFSRFGLSDDEAADITMDDAPRLENHVGLNGDMVVADVDKMETSESELSHSLPAHLGLDPGKMKEMRMLMFPRKDIDESEEFGDQTSFPMTSLTKRRARTSQKHSQRDTHQDTPLVVRKTPLALLEYNPGNDKSSPGSILMVQQNKNLAVRKSKMGGFELDISHETPLTDNYSRNVVDAALFMGRSFRAGWGPNGVLLHTGNPISSSSSQRVLSSVINVDKIAVDKVVRDKKGKVQKELIDSAFETPLSLHKVLYREEEKEVRFGSFSLKLQKVVTDRVVLSDICRNYIDIIEKQLEFPGLSTSAKLFLTHQVMVWELIKVLFCERQSTYAVFDNEEDMMQDVKEESAEVDTEALPLIRRAEFSCWLQECVSHRVQEDVSDLNGSGYLKHLFFLLTGRELDSAVELAISKGDVRLACLLSQVGGSTVNRDDIMQQLHLWGRNGLDFNYIEKDRIKLYELLAGNIHDALQDVAIDWKRFLGLLMWHHLAPDSSLPVIFRNYQLLLDQGKAPWPVPIYIDEGPADGIVSNTKHSDLLYYLMLLHSREEGKIGFLKTMFSAFSSTDDPLDYHMIWHQRGILEAVGAFTSDDLHALDMGFVAQLLSQGLCHWAIYVVLHMPYRKDRPYLHFTVIREILFQFCETWSSVESQRQFIKNLGIPSEWMHEALAVYYNYHGDFVKALDHFIECANWQRAHSIFMTSVAHSLFLSANHSEIWRIATSMDDRKSEIENWDLGAGIYMSFYLLKSSLEEDADTMLELDSPESKNESCRSFVGRLNESLAVWGDRLPVEARVAYTKMAEEICELLLSGLSVYPDRDSQLSCFMTAFKAPLPEDVRSSHLKDAVSLFSLYLSETGHQTSA