Gene Details:
- Gene ID: A02p011870.1_BraROA
- Suggest Gene Name: ATSIZ1
- Description: putative flowering gene
- Species: Brassica rapa ro18
- Source: Putative flowering gene from PlantCFG
Protein Features:
Functional Descriptions:
- Encodes a plant small ubiquitin-like modifier (SUMO) E3 ligase that is a focal controller of Pi starvation-dependent responses. Also required for SA and PAD4-mediated R gene signalling, which in turn confers innate immunity in Arabidopsis. Also involved in the regulation of plant growth, drought responses and freezing tolerance. This latter effect is most likely due to SIZ1 dependent ABI5 sumoylation. Regulates leaf cell division and expansion through salicylic acid accumulation. signaling
Homologous
- Arabidopsis thaliana — AT5G60410
Sequences:
gDNA Sequence
- >A02p011870.1_BraROA
CACTCATCAGAATCCGAGTCAATGGAGAGGAACATCCGAGGTCTTACAGAACGCTTCTGTCGAGGAAATGAAAATGGATTATCTGATCTTCGCTTCTTTGCCTTGTCTTGTCTACTTTCATTCATACCCAGCAGCAACGAATCTGCAAATAAAGAAAACACTAACCAGTCAGTAACTGTGGTAAAACACAAGCAGATCCACATTAATTATTTAGTGTCTCACCATTCTCTGTCGTATCATCCAAAGAACCTTCCCTTGCATTAGCAGGCTCTCCGTGATCCTCACAAACACTATCACCTAGCCTAAGCGAGATCCAGTCATCACTCCTGATACCATTCGACACATCACCTTGGTTCCGAAAACCAGACTGAGCTGAACCATCCGGTTTCGTCGGCAAAAATATCTGAAGGGAAGGATCGTCTCTACCAAACGCAAGAGGATTGTCAACTAAGCCATCATTCGCAACGGCTTCAGCTCTTCCATCTGGAACTACAGGAGGAGGAATAGACGCCATTGATGTTGTCTCAGGAGCCATGGTGTAGTCTCCATTTATCTCAGGACCACAGTTCAGTGAACCTTGATGATGCAAATCAACGTCAGCATCAGATGCAAAAAGCTGGAACCCAGAGGCTTCTGGAGTTTCAGAAGGAAACGACCAAAGGCGCGTATCAAACTCATCATCATCGTTGAAAAGACCTAACCGTGAACTTCCCCCAGCTAAGGTGTGTGGCTCTTCGTTATAAGAGTTGATGATTCCAGAAGGGTTCAACGGAAAATTCACCCCACCGTTGGTTCTTGAATCACTGTACGCAGGTCCAGGGGTGATGACCAAATCATTATCTTCATCGGAATCACTCAGAACAATAACTTCATTATTCCTATCCTCTCCAGCTTGGTTATAACCTGAATCCACATTCATGGAAACTGAATCGAGATCAACGCCGTTGGTTCCAAAGTCAAAGGTTGTTCCAATAGCAGCGCCCTGGTTGACGCTTGTGTCATCACCATCCCTACCACTTCCAGTAGCGCTGCTACTCATCGGTATAATATGATGATTCTTCTCTTGCCTGTTACTGGAAGACATTCCATTTGCATTATTAGGCTTGCTAACTTCCCAAACGCCGTTGCGGTTCTTCCTTATGCCGAGCTTCAGAGAGGTTGGTCCACCACCATCTGAGAAGCCTTCTTGTTTAACAGGGATCATCGTTTCCATCTTCCGTTTAATCTCGTCGCCAGAGGGGCAAAGAGTGCCATCGGGTGCGTGCCATTGCGTGAGTTCCCCTAGTTCCCTACGCTCACTCTCTTTTTTAGATTTGACGCGCCAAGAGCCGTCAGGTTTCACTTCGATTTCAGTCACCTCTTCATCACAATGCATCATCTGAGGTGCAGGAAGGAAAGCAATTCAATAAATAACGTTAGATATAAATTTTCAATGATTCTAGTATACCTTTGACGTGATGCGGTTGAAATAAGGATCCACGATTACATGCTCCACTGAGTAGTTCTTCAGACAGATAGGGCATTGCCACTGCATGTAATGAAAGCCACAGAACAAATGAAATCAGAAAATTAGAGGAATAATAATCCAAAATTTTTTGACAAGGATAGGAGAACTTGCCTTTCTGGAACGTTGATTCAACTCCACAAACACCTCAAGGTCGAAACCGCCCATGTGCACACAGGGTAAGAATCTCCCAGCAACTTTTATCCTAGAACCGCTCATCTAATGACACAAGTAGAAAAGACAGTTAAAATTCAGTCTGCAAGGAAATGCACACGTGCGCAGCATCAGTTACATGACTGAATAAGCAAGCTATTGGTAACTTACAGGACAACGGAGATTGACACCGAAGAAGTCAGCAACAACTTCAATGTCACTATCACTGTCGGCATTATCATCTCCACCTCCACCTCCAATGCATCGCCGAACACGTGCAAGCGCATCTTCAAACGTCTCCCCTTTGGTCTCTTCTGGAATCAAATTAAGAACCTATATGGGGAAAAGGAGTAAATATTGAGGCAACTTATATCAGCATAACTGAATTCCTGAGCTATCAAGAAACACTAACTATAGTGAGAAAAAGGGAAATAAAAAGTTGCAGCATGACAGGCGGGTGACATTAAGTACACAATTGCAATCCAACGAAGCTTTAAACAGAGAACAAAAGAATAGGACTCTAATATCTAGTGAGAGTTCGAAATGAACAATGGAAATTTTAAATGTAAGTATGCATCCATCCACGGGTAACTTTCACAGATTACTTTCTTCAAATGTAAATTTAATTTCTTTCGGTCTGTATCAGAAGATCGTTTTGTTTATCTTTTTCATTTATGTTTTTATTGCCCCCCATAGACCGACCAAAACCATGTTTGAATGTTTCTCATGCAAAACATGTGATCAGTACCTGTTGTAGAGTCCTGCGCTTCACAAGTCTTACTCCGAAACAAAAGCTTCGACTGTCACCTCCACTCAAGGATATTCTGTTAATTCCATCCCTAACAAAAGGTGTGATCTGCCAAAACAGTAGAATGAGATGGTAAACAAATTACACCACTGACTGCAAAACTCTCAATGTACGAGAGATCGACTACTATATTTAAGTCAAAAGGGTTACTGTCGAAAAGGGATGAAAACATACAATAGGTCCATCGTCGCGGCCGTTGGCCCCCAAAAGCTGTGAGCCAGGTCGGTAAATTGCACGTACAGGCATACCATTGATCTGCAGATCAGCATGCTGAGGCCACTGCATCCTAAAGAGAACTTTGTCATTCAATAGCATACACCAAGCCTAAACAAAAGAAGTAAATTCCCATTAGAAACGCATAAAATAGATACGGTATTACATATTGAAAGTACTTTGCAAAACCCAACCTGAACATCGTACTCTTGTTTGGCCAATAAGTCCTTGTCTGCCCTTGTGATTTGAAATGTTCTCTCAGCACTCTGCATTGCGCTTGAACTGGAAAGATTTTGATCGTAGTATTAGAATGAATAAAAGCTAGTAGCATTATTTTTTCAGTAGGGGTGCATCTAGCTACAAAACAATTGTGATTCTTGTTCTCTAGACACTTAAAAGATCGACTTATTGCAGTTCCCAGTTGTAAGTCAACTGACTAGCAGGATCATGATGCAGATGATTCATTAGTGAATGCGTTTTCTTGCAAACCATTAGAGGAAACAAAAAAAAAACGTGAAAGTGGCTAATACAGAATGAGACAGATGGTGATGTATCATCTAGGATAGCCCAATGAGTACTTCAGCTTTCTAAAGAAGAAAAACGTCAACAATTGTAATTTTCAAGAATTGGCATAGAATTAGAAAAATTTAAAGAAAATATGAAGTTTCTCACCCATCAGTTGGGATGTTCGTTGCAGTCAACCTCACTGGATAAAGTGGATGTGCCACTGTAACCCAAAACCTGCACAAGGAAGACCATGTAGGACAAACGTGAAACAAAATACTAATGGATAACGAATTTAAAGATAACATTAAAATTTCAGAACTAGAAGCAGAACAACTACAAATGCAAGGAGATATAGAAAACTAGAATGGGAAGCATATCAAATGAAAAATACGTCTTCCTTTTCAGAACTAACGGGACAGAGTTATCATGCAGTAGAGAGTTAACTCATATGGACAATTGTTCACAACTCAAACAGAGACAGGGAAAATAAAATCTTACGGGTCAGCTCGAGTGAGTCGGCAGACTTCACAATAAAATGATTCAGGAAGTGGTGGATTTCCATCCATAGGCTTTTCCGGGACAATAACACACCCAACATGCTCCCAAACATGGCATCTTGGATCATCACACTGAAACCAAAAAAAAATTAAAAAAAATTACAAACATGTAACTTCTCCAAAGCTAGCTCAAACAGGAATAGACACGCCGAGCATTACCTGAATCATTGACTCCGTCTCCAGTGAACTTCCACAGACACACCGAACTTTCATCTCTGGTCGAAAGGAAGCTTCAGGCTCCCCCTTGACTTTCAGATTACTCGTATCTGAGCTTACTTGTGCTTTTGATGCCAAATCACTTGCTCCAGATACTTTGATTTTCCTATTGAACACAAAAGAAAATAAACATTGCGTTAGAATCGTACAAGAAAAGCATGGCGATCCCGTAAAGAAACGATTCAACACCTATAAGTATCATCCACCAGTCTTGCAACTTCTTCCTTCGCCACTGTGTTCCTTTTAGACCACAACCTTGCAGCTGTCAGTAGGAAACAAAGACAAATGTTTAAGAGAAGATAACGCAAAATACACCAAGACGTGAGAATAAACAAAGAGAAAGGGGTTCAACTAACATTTTCCATCAGAAAGAACGGTCAAGATCCGCTCGACAAGTTCCTGTACAAGAAGATTTCAAAAAGAGTTCAAAACACACACATGTGTATTCAACAGCAGCCTATGAGAACCATGAACCTTATCTGATATCTACACAGTACATTCCCACATAATACTTGAAAAGAAATCACGTAATTTAAAACGAAACAGATAACACTTGTGTCTTAGATTGATGATAGCAATGATTGCAACACTCATCATTTAAAACAACAACAGCACCGCAACTGTAACTAATGAAAGATAAGGAGAGAAAGATATTGTTACCTGCTTCTTTCCCTGTTTCGAAAGTCCGAGCTGAGTGAGCACATCCTTGAGCTCTTTTATCCTAAAATGTAAAAGCTTATCCTGCAACCCACAACAACAAACAAAAAAAACTAAACTTTGAGCCTAACAAGAACAGATAAAGCAAACCCATCAAAAAAGGAGAGACCTTTCAGACAACAAGTACCTTACAACGAGCTTCCAAGTCCAT
CDS Sequence
- >A02p011870.1_BraROA
ATGGACTTGGAAGCTCGTTGTAAGGATAAGCTTTTACATTTTAGGATAAAAGAGCTCAAGGATGTGCTCACTCAGCTCGGACTTTCGAAACAGGGAAAGAAGCAGGAACTTGTCGAGCGGATCTTGACCGTTCTTTCTGATGGAAAATCTGCAAGGTTGTGGTCTAAAAGGAACACAGTGGCGAAGGAAGAAGTTGCAAGACTGGTGGATGATACTTATAGGAAAATCAAAGTATCTGGAGCAAGTGATTTGGCATCAAAAGCACAAGTAAGCTCAGATACGAGTAATCTGAAAGTCAAGGGGGAGCCTGAAGCTTCCTTTCGACCAGAGATGAAAGTTCGGTGTGTCTGTGGAAGTTCACTGGAGACGGAGTCAATGATTCAGTGTGATGATCCAAGATGCCATGTTTGGGAGCATGTTGGGTGTGTTATTGTCCCGGAAAAGCCTATGGATGGAAATCCACCACTTCCTGAATCATTTTATTGTGAAGTCTGCCGACTCACTCGAGCTGACCCGTTTTGGGTTACAGTGGCACATCCACTTTATCCAGTGAGGTTGACTGCAACGAACATCCCAACTGATGGTTCAAGCGCAATGCAGAGTGCTGAGAGAACATTTCAAATCACAAGGGCAGACAAGGACTTATTGGCCAAACAAGAGTACGATGTTCAGGCTTGGTGTATGCTATTGAATGACAAAGTTCTCTTTAGGATGCAGTGGCCTCAGCATGCTGATCTGCAGATCAATGGTATGCCTGTACGTGCAATTTACCGACCTGGCTCACAGCTTTTGGGGGCCAACGGCCGCGACGATGGACCTATTATCACACCTTTTGTTAGGGATGGAATTAACAGAATATCCTTGAGTGGAGGTGACAGTCGAAGCTTTTGTTTCGGAGTAAGACTTGTGAAGCGCAGGACTCTACAACAGGTTCTTAATTTGATTCCAGAAGAGACCAAAGGGGAGACGTTTGAAGATGCGCTTGCACGTGTTCGGCGATGCATTGGAGGTGGAGGTGGAGATGATAATGCCGACAGTGATAGTGACATTGAAGTTGTTGCTGACTTCTTCGGTGTCAATCTCCGTTGTCCTATGAGCGGTTCTAGGATAAAAGTTGCTGGGAGATTCTTACCCTGTGTGCACATGGGCGGTTTCGACCTTGAGTGGCAATGCCCTATCTGTCTGAAGAACTACTCAGTGGAGCATGTAATCGTGGATCCTTATTTCAACCGCATCACGTCAAAGATGATGCATTGTGATGAAGAGGTGACTGAAATCGAAGTGAAACCTGACGGCTCTTGGCGCGTCAAATCTAAAAAAGAGAGTGAGCGTAGGGAACTAGGGGAACTCACGCAATGGCACGCACCCGATGGCACTCTTTGCCCCTCTGGCGACGAGATTAAACGGAAGATGGAAACGATGATCCCTGTTAAACAAGAAGGCTTCTCAGATGGTGGTGGACCAACCTCTCTGAAGCTCGGCATAAGGAAGAACCGCAACGGCGTTTGGGAAGTTAGCAAGCCTAATAATGCAAATGGAATGTCTTCCAGTAACAGGCAAGAGAAGAATCATCATATTATACCGATGAGTAGCAGCGCTACTGGAAGTGGTAGGGATGGTGATGACACAAGCGTCAACCAGGGCGCTGCTATTGGAACAACCTTTGACTTTGGAACCAACGGCGTTGATCTCGATTCAGTTTCCATGAATGTGGATTCAGGTTATAACCAAGCTGGAGAGGATAGGAATAATGAAGTTATTGTTCTGAGTGATTCCGATGAAGATAATGATTTGGTCATCACCCCTGGACCTGCGTACAGTGATTCAAGAACCAACGGTGGGGTGAATTTTCCGTTGAACCCTTCTGGAATCATCAACTCTTATAACGAAGAGCCACACACCTTAGCTGGGGGAAGTTCACGGTTAGGTCTTTTCAACGATGATGATGAGTTTGATACGCGCCTTTGGTCGTTTCCTTCTGAAACTCCAGAAGCCTCTGGGTTCCAGCTTTTTGCATCTGATGCTGACGTTGATTTGCATCATCAAGGTTCACTGAACTGTGGTCCTGAGATAAATGGAGACTACACCATGGCTCCTGAGACAACATCAATGGCGTCTATTCCTCCTCCTGTAGTTCCAGATGGAAGAGCTGAAGCCGTTGCGAATGATGGCTTAGTTGACAATCCTCTTGCGTTTGGTAGAGACGATCCTTCCCTTCAGATATTTTTGCCGACGAAACCGGATGGTTCAGCTCAGTCTGGTTTTCGGAACCAAGGTGATGTGTCGAATGGTATCAGGAGTGATGACTGGATCTCGCTTAGGCTAGGTGATAGTGTTTGTGAGGATCACGGAGAGCCTGCTAATGCAAGGGAAGGTTCTTTGGATGATACGACAGAGAATGATTCGTTGCTGCTGGGTATGAATGAAAGTAGACAAGACAAGGCAAAGAAGCGAAGATCAGATAATCCATTTTCATTTCCTCGACAGAAGCGTTCTGTAAGACCTCGGATGTTCCTCTCCATTGACTCGGATTCTGATGAGTGA
Protein Sequence
- >A02p011870.1_BraROA
MDLEARCKDKLLHFRIKELKDVLTQLGLSKQGKKQELVERILTVLSDGKSARLWSKRNTVAKEEVARLVDDTYRKIKVSGASDLASKAQVSSDTSNLKVKGEPEASFRPEMKVRCVCGSSLETESMIQCDDPRCHVWEHVGCVIVPEKPMDGNPPLPESFYCEVCRLTRADPFWVTVAHPLYPVRLTATNIPTDGSSAMQSAERTFQITRADKDLLAKQEYDVQAWCMLLNDKVLFRMQWPQHADLQINGMPVRAIYRPGSQLLGANGRDDGPIITPFVRDGINRISLSGGDSRSFCFGVRLVKRRTLQQVLNLIPEETKGETFEDALARVRRCIGGGGGDDNADSDSDIEVVADFFGVNLRCPMSGSRIKVAGRFLPCVHMGGFDLEWQCPICLKNYSVEHVIVDPYFNRITSKMMHCDEEVTEIEVKPDGSWRVKSKKESERRELGELTQWHAPDGTLCPSGDEIKRKMETMIPVKQEGFSDGGGPTSLKLGIRKNRNGVWEVSKPNNANGMSSSNRQEKNHHIIPMSSSATGSGRDGDDTSVNQGAAIGTTFDFGTNGVDLDSVSMNVDSGYNQAGEDRNNEVIVLSDSDEDNDLVITPGPAYSDSRTNGGVNFPLNPSGIINSYNEEPHTLAGGSSRLGLFNDDDEFDTRLWSFPSETPEASGFQLFASDADVDLHHQGSLNCGPEINGDYTMAPETTSMASIPPPVVPDGRAEAVANDGLVDNPLAFGRDDPSLQIFLPTKPDGSAQSGFRNQGDVSNGIRSDDWISLRLGDSVCEDHGEPANAREGSLDDTTENDSLLLGMNESRQDKAKKRRSDNPFSFPRQKRSVRPRMFLSIDSDSDE