Gene Details:
- Gene ID: A01p059530.1_BraROA
- Suggest Gene Name: ARABIDOPSIS SNF1 KINASE HOMOLOG 10 , SNF1-RELATED PROTEIN KINASE 1.1
- Description: putative flowering gene
- Species: Brassica rapa ro18
- Source: Putative flowering gene from PlantCFG
Protein Features:
Functional Descriptions:
- encodes a SNF1-related protein kinase that physically interacts with SCF subunit SKP1/ASK1 and 20S proteosome subunit PAD1. It can also interact with PRL1 DWD-containing protein. Based on in vitro degradation assays and cul4cs and prl1 mutants, there is evidence that AKIN10 is degraded in a proteasome-dependent manner, and that this depends on a CUL4-PRL1 E3 ligase
Homologous
- Arabidopsis thaliana — AT3G01090
Sequences:
gDNA Sequence
- >A01p059530.1_BraROA
TGGATGGATCAGGAGGCGGTAGAGGTGGTGGCGTGGAATCGATTCTACCGAACTACAAGCTCGGGAGGACTCTCGGTATCGGTTCCTTTGGCAGGGTTAAGATTGCTGAGCACTCTTTGACCGGTCATAAAGTTGCCATCAAGATCCTCAACCGTCGCAAAATCAAGAACATGGAGATGGAGGAAAAAGGTACACTATATGCTTTGGATATTATTAGCTTTTCTTTTGATCAAATCTCATTCATTTTTGTGCTTTTTTTCCTGTTTTCTCTTTTGGTGCAGTGAGGAGAGAGATTAAAATCTTGAGACTCTTTATGCATCCTCACATCATCCGTCTCTATGAGGTCATTGAGACTCCCACTGATATCTATCTTGTCATGGAGTATGTCAACTCTGGTGAGCTTTTTGACTATATTGTAGAGAAGGGTAGACTACAGGAGGACGAGGCCAGGAACTTTTTTCAGCAGGTATTGTTTCCTTTTTATCATTTTATTTGAGAGCTAGCCATGAGTCATGACTTGACTTTGATGTAGATAATATCTGGAGTGGAGTATTGCCATCGGAATATGGTAGTTCACAGAGATCTTAAGCCTGAGAACTTGCTTTTGGACTCCAAATGCAATGTGAAAATTGCTGATTTTGGACTGAGCAACATTATGAGAGATGGTCATTTTCTGAAGACAAGCTGTGGTAGTCCCAATTACGCTGCTCCTGAGGTGAGTTATTTAACCTTCATGTATCTGAGGAGCACTGTCTATATATAGGGAGTATTCTTGGAGATCAGTTTTAATCGAGATCAGTCAATTGTTTCAGGTCATTTCGGGTAAACTATATGCTGGCCCTGAAGTAGACGTCTGGAGCTGTGGTGTGATACTCTACGCTCTTCTTTGTGGGACTCTTCCGTTCGATGATGAGAACATTCCAAACCTTTTTAAGAAGATAAAGGTACTGCAAAACACGTCCTGTTACTTGAGATCTTTTAGTTATATTTGGGTTCTTCAAGTTATATATTTTCTCTTTACGTCTTTTAGGGAGGGATATATACTCTGCCTAGCCATTTATCTGGTGGTGCTAGAGATTTGATCCCCAGGATGCTCGTGGTGGACCCCATGAAAAGAGTAACCATCCCTGAGATCCGGCAACACAATTGGTTCCAAGCTCATCTTCCTAGGTATTTAGCTGTTCCTCCTCCAGATACGGTGCAGCAGGCCAAAAAGGTGAACCTGACGTATCTACTCTCATTTTCATCAGAGATTGTTTATATTTCCCTTTTATCAAAATAGCTTAAAAGCATTGGTTTCATTTGTAGATTGACGAGGAGATTCTCCAAGAAGTTATCAATATGGGATTTGACAGAAACCTCCTCATTGAGTCTCTCCGCAACCGAACTCAAAATGATGTATGTGTTTCTCTCAGCCTCTAGGCCATTTGCTATTTGCTTCTTATATTCAAAAGTAAAAAAAAATATTCAATTGTTATCGACTGCTATCTTCCAGGGCACTGTGACATACTATCTGATACTGGACAACCGGTTCCGTGTCTCTGCTGGTTATCTCGGGGCCGAGTTTCAAGAGACTATGGTGGGTCTCTCACTGTCCTTTTTTTTTTACTGCAGCAAAAGATCTTTGAAATTAATCCTTGAATGTTGAAAATTAATCAGGAAGGTACTCCGCGAATGCATCCAGCAGAAAGCGTAGCTTCACCAGTTAGCCATCGGCTTCCAGGACTGATGGAGTTCCAAGGAGTTGGCTTGAGATCTCAATACCCTGTTGAGAGAAAATGGGCTCTTGGACTTCAGGTCTTTATATTTTTTTCTGAGTTTATAGCTTTTGATTTTTTTATCTGTTCCGTTTGATTGATAATTCAAACCACTGGATCCAACAGTCTAGGGCTCATCCGCGTGAAATAATGACAGAGGTGCTGAAAGCCCTGCAAGATCTGAGTGTGTGTTGGAAGAAGATAGGGCCTTACAACATGAAGTGCAGATGGGTTCCTAACAACTCAGATGGAATGCTCAGTAACTCGATGCACGATAACAACTACTTTGGAGATGACTCCAGCATAGTAGAAAACGACGCAGCTGTTAAGTCTCCAAATGTTGTCAAATTTGAAATTCAGGTAATAAATCCTCTTCTTCATTTGGAGCACTTCTTGATAAGCACACATTTTTATGACTCAGATGGGGCTTGCACGCTGTTTATGATGTGTGAATAGAAATAGAACTAAACTTGTTCAGTTCAATATGGATATGATAAGAATCTCTGGGGCTGATGAATGTTTGTTGTTGATGGTGGAACAGTTGTATAAAACACGGGACGACAAGTATCTGCTGGATCTGCAGAGAGTACATGGTCCTCAGTTCCTGTTCTTGGACCTCTGTGCTGCTTTTCTTGCTCAGCTCCGAGTCCTCTGA
CDS Sequence
- >A01p059530.1_BraROA
ATGGATGGATCAGGAGGCGGTAGAGGTGGTGGCGTGGAATCGATTCTACCGAACTACAAGCTCGGGAGGACTCTCGGTATCGGTTCCTTTGGCAGGGTTAAGATTGCTGAGCACTCTTTGACCGGTCATAAAGTTGCCATCAAGATCCTCAACCGTCGCAAAATCAAGAACATGGAGATGGAGGAAAAAGTGAGGAGAGAGATTAAAATCTTGAGACTCTTTATGCATCCTCACATCATCCGTCTCTATGAGGTCATTGAGACTCCCACTGATATCTATCTTGTCATGGAGTATGTCAACTCTGGTGAGCTTTTTGACTATATTGTAGAGAAGGGTAGACTACAGGAGGACGAGGCCAGGAACTTTTTTCAGCAGATAATATCTGGAGTGGAGTATTGCCATCGGAATATGGTAGTTCACAGAGATCTTAAGCCTGAGAACTTGCTTTTGGACTCCAAATGCAATGTGAAAATTGCTGATTTTGGACTGAGCAACATTATGAGAGATGGTCATTTTCTGAAGACAAGCTGTGGTAGTCCCAATTACGCTGCTCCTGAGGTCATTTCGGGTAAACTATATGCTGGCCCTGAAGTAGACGTCTGGAGCTGTGGTGTGATACTCTACGCTCTTCTTTGTGGGACTCTTCCGTTCGATGATGAGAACATTCCAAACCTTTTTAAGAAGATAAAGGGAGGGATATATACTCTGCCTAGCCATTTATCTGGTGGTGCTAGAGATTTGATCCCCAGGATGCTCGTGGTGGACCCCATGAAAAGAGTAACCATCCCTGAGATCCGGCAACACAATTGGTTCCAAGCTCATCTTCCTAGGTATTTAGCTGTTCCTCCTCCAGATACGGTGCAGCAGGCCAAAAAGATTGACGAGGAGATTCTCCAAGAAGTTATCAATATGGGATTTGACAGAAACCTCCTCATTGAGTCTCTCCGCAACCGAACTCAAAATGATGGCACTGTGACATACTATCTGATACTGGACAACCGGTTCCGTGTCTCTGCTGGTTATCTCGGGGCCGAGTTTCAAGAGACTATGGAAGGTACTCCGCGAATGCATCCAGCAGAAAGCGTAGCTTCACCAGTTAGCCATCGGCTTCCAGGACTGATGGAGTTCCAAGGAGTTGGCTTGAGATCTCAATACCCTGTTGAGAGAAAATGGGCTCTTGGACTTCAGTCTAGGGCTCATCCGCGTGAAATAATGACAGAGGTGCTGAAAGCCCTGCAAGATCTGAGTGTGTGTTGGAAGAAGATAGGGCCTTACAACATGAAGTGCAGATGGGTTCCTAACAACTCAGATGGAATGCTCAGTAACTCGATGCACGATAACAACTACTTTGGAGATGACTCCAGCATAGTAGAAAACGACGCAGCTGTTAAGTCTCCAAATGTTGTCAAATTTGAAATTCAGTTGTATAAAACACGGGACGACAAGTATCTGCTGGATCTGCAGAGAGTACATGGTCCTCAGTTCCTGTTCTTGGACCTCTGTGCTGCTTTTCTTGCTCAGCTCCGAGTCCTCTGA
Protein Sequence
- >A01p059530.1_BraROA
MDGSGGGRGGGVESILPNYKLGRTLGIGSFGRVKIAEHSLTGHKVAIKILNRRKIKNMEMEEKVRREIKILRLFMHPHIIRLYEVIETPTDIYLVMEYVNSGELFDYIVEKGRLQEDEARNFFQQIISGVEYCHRNMVVHRDLKPENLLLDSKCNVKIADFGLSNIMRDGHFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYALLCGTLPFDDENIPNLFKKIKGGIYTLPSHLSGGARDLIPRMLVVDPMKRVTIPEIRQHNWFQAHLPRYLAVPPPDTVQQAKKIDEEILQEVINMGFDRNLLIESLRNRTQNDGTVTYYLILDNRFRVSAGYLGAEFQETMEGTPRMHPAESVASPVSHRLPGLMEFQGVGLRSQYPVERKWALGLQSRAHPREIMTEVLKALQDLSVCWKKIGPYNMKCRWVPNNSDGMLSNSMHDNNYFGDDSSIVENDAAVKSPNVVKFEIQLYKTRDDKYLLDLQRVHGPQFLFLDLCAAFLAQLRVL