Gene Details:
- Gene ID: A01p052010.1_BraROA
- Suggest Gene Name: LSD1-LIKE 2
- Description: putative flowering gene
- Species: Brassica rapa ro18
- Source: Putative flowering gene from PlantCFG
Protein Features:
Functional Descriptions:
- Encodes a homolog of human Lysine-Specific Demethylase1. Involved in H3K4 methylation of target genes including the flowering loci FLC and FWA.;Encodes a histone acetylase related to Arabidopsis FLOWERING LOCUS D
Homologous
- Arabidopsis thaliana — AT3G13682
- Oryza sativa — LOC_Os08g04780
Sequences:
gDNA Sequence
- >A01p052010.1_BraROA
TGGACAATCCGTCGTCGGAAGGATCGGCTCCGAGGAGGACTTTACGGAGAAAAGCAGTCAGGAAGAACTACGACGAGAACGCGATGGACGAACCGATCGAAACCTCGAAGAAGAAGTTCAAAACGAAGCAGCAGCTGGAGAAAGAAACCGAGACGGAGGCGCTGATCGCCTTATCCGTCGGCTTCCCGATCGACGAGCTTCTCGAGGACGAGATCCGCGCCGGCGTGGTGAGGGAGCTGGGAGGGAAAGAGCAGAACGACTACATCGTCGTTAGGAACCATATAGTCGCTAGGTGGAGGAGTAACGTTAGGGTTTGGCTGCTTAAAGATCGGATTAGAGAGTCTGTGAGTAGTGAATGCGAGCATTTGATCTCCGCTGCTTATGAGTTTCTGTTGTATAATGGTTTCATTAACTTTGGGGTGTCTCCGTTGTTTAATGGATATGTTCCTGAAGATGGGAGTGAAGGTTCGGTGATTGTTGTCGGTGCTGGACTTGCTGGTTTGGCTGCTGCGAGGCAGCTTTTGTCTTTTGGGTTTAAAGTTGTTGTTTTGGAAGGTAGGAGTCGTCCTGGGGGGAGAGTTTATACTCAGAGGATGGGAGGGAAGGAGAGGTTTGCAGCTGTTGAGCTCGGTGGGAGTGTGATCACTGGTCTACACGCGAACCCGCTTGGAGTTCTCGCGAGGCAGCTTGCTATTCCTCTTCATAAGGTGAGGGATCATTGTCCTTTGTATAACTCGGAGGGAGAGGTTGTTGATAAGGCTGTTGACTCCAATGTTGAGTTTGGGTTTAATAAGCTTCTGGATAAGGTTGCTGAGGTGAGGGAGATGATGGGTGGGGATGCTAATAAGGTTTCGTTGGGTGAGGTGTTGGAGACTCTCAGGGTGTTGTACGGTGTGGCTAAGGATTCGGAGGAGAGGAAGCTTTTTGACTGGCACCTTGCTAACTTGGAGTATGCTAACGCGGGCTGTCTTTCGAATCTTTCGGCTGCTTATTGGGATCAGGATGATCCGTACGAGATGGGTGGGGATCATTGTTTCCTTGCCGGTGGGAACTGGAGACTTATAAATGCATTAGCTGAAGGGTTACCTATTCTCTATGGGAAAAGAGTTGATGCTATCAGGTATGGAGACAGAGGAGTTGAAGTCGTTTCCGGCAGCCAGAGGTTTCAAGGAGACATGATTCTTTGCACTGTTCCGCTAGGTGTCTTGAAGAAAAGATGTATTAAGTTCGAGCCAGAGTTGCCTAGGAAAAAACAAGCAGCCATTGACAGGTTGGGCTTTGGTCTTCTGAACAAAGTTGCCATGCTGTTCCCGTCTGTGTTCTGGGGTGACGATTTGGACACGTTTGGATGCCTCAACGATAGTAGTATCGACCGAGGAGAGTTCTTTCTGTTCTATGCGTACCATACAGTCTCTGGTGGCCCTGCTTTAGTTGCCTTGGTTGCTGGAGAAGCTGCTCAGAGATTTGAGTCCACAGAACCATCTACTTTACTTCACCGTGTTATGAAAAAACTCAGAGGTAGATAAAATATTTAATAACGTCATCAACCTCTTACTGCTAAGTGCTAACCAATAATGTCATTTGACTGATATCTCTGCAGGCATATATGGTCCTAAAGGTGTTGTTGTACCTGACCCAATACAGACGATTTGCACTAAATGGGGAAGTGATCCTTTCTCATATGGCTCATATTCACATGTAAGGGTTGGTTCATCAGGCGTGGACTACGACATTCTAGCAGAAAGTGTAAATAACCGACTATTCTTCGCTGGTGAGGCCACGACAAGGCAACATCCAGCAACAATGCACGGTGCCTACTTAAGCGGGTTAAGGGAAGCGTCTCGGATTCAACGCGTTGTGAATGTTTCTCGCGGTTACCCGAGGAAGCCTGTCCAGAGATACAGTGGAGTTAGTAACGATGTTCTTGAAGATCTGTTCAAAAGACCCGACATTGCATCTGGACAGTTGTCGTTTGTCTTCAACCCATCAACCGATGATCCGAAATCACTCGGATTAGTCAGAGTTTGCTTTGACAGCTTTGAAGACGATCCAACTAATCATCTTCAGCTTTACGCTATCTTATCATGGGAGCAAGCTCAGAAGCTTCAAGAATTGGGAGAGAGCAGTAATGAAAGCAAGTTGACGTATATGGTGAATACTCTCGGGTTAAAGCTGATGGGTGGCAATGCAGTACTAGACACATGTGGTGCATTGATCAGTGTGATAGCTAACGCACGCAAAGGCAGAAGCAGGACTCGTGTCGTTGCGAGGCACTAA
CDS Sequence
- >A01p052010.1_BraROA
ATGGACAATCCGTCGTCGGAAGGATCGGCTCCGAGGAGGACTTTACGGAGAAAAGCAGTCAGGAAGAACTACGACGAGAACGCGATGGACGAACCGATCGAAACCTCGAAGAAGAAGTTCAAAACGAAGCAGCAGCTGGAGAAAGAAACCGAGACGGAGGCGCTGATCGCCTTATCCGTCGGCTTCCCGATCGACGAGCTTCTCGAGGACGAGATCCGCGCCGGCGTGGTGAGGGAGCTGGGAGGGAAAGAGCAGAACGACTACATCGTCGTTAGGAACCATATAGTCGCTAGGTGGAGGAGTAACGTTAGGGTTTGGCTGCTTAAAGATCGGATTAGAGAGTCTGTGAGTAGTGAATGCGAGCATTTGATCTCCGCTGCTTATGAGTTTCTGTTGTATAATGGTTTCATTAACTTTGGGGTGTCTCCGTTGTTTAATGGATATGTTCCTGAAGATGGGAGTGAAGGTTCGGTGATTGTTGTCGGTGCTGGACTTGCTGGTTTGGCTGCTGCGAGGCAGCTTTTGTCTTTTGGGTTTAAAGTTGTTGTTTTGGAAGGTAGGAGTCGTCCTGGGGGGAGAGTTTATACTCAGAGGATGGGAGGGAAGGAGAGGTTTGCAGCTGTTGAGCTCGGTGGGAGTGTGATCACTGGTCTACACGCGAACCCGCTTGGAGTTCTCGCGAGGCAGCTTGCTATTCCTCTTCATAAGGTGAGGGATCATTGTCCTTTGTATAACTCGGAGGGAGAGGTTGTTGATAAGGCTGTTGACTCCAATGTTGAGTTTGGGTTTAATAAGCTTCTGGATAAGGTTGCTGAGGTGAGGGAGATGATGGGTGGGGATGCTAATAAGGTTTCGTTGGGTGAGGTGTTGGAGACTCTCAGGGTGTTGTACGGTGTGGCTAAGGATTCGGAGGAGAGGAAGCTTTTTGACTGGCACCTTGCTAACTTGGAGTATGCTAACGCGGGCTGTCTTTCGAATCTTTCGGCTGCTTATTGGGATCAGGATGATCCGTACGAGATGGGTGGGGATCATTGTTTCCTTGCCGGTGGGAACTGGAGACTTATAAATGCATTAGCTGAAGGGTTACCTATTCTCTATGGGAAAAGAGTTGATGCTATCAGGTATGGAGACAGAGGAGTTGAAGTCGTTTCCGGCAGCCAGAGGTTTCAAGGAGACATGATTCTTTGCACTGTTCCGCTAGGTGTCTTGAAGAAAAGATGTATTAAGTTCGAGCCAGAGTTGCCTAGGAAAAAACAAGCAGCCATTGACAGGTTGGGCTTTGGTCTTCTGAACAAAGTTGCCATGCTGTTCCCGTCTGTGTTCTGGGGTGACGATTTGGACACGTTTGGATGCCTCAACGATAGTAGTATCGACCGAGGAGAGTTCTTTCTGTTCTATGCGTACCATACAGTCTCTGGTGGCCCTGCTTTAGTTGCCTTGGTTGCTGGAGAAGCTGCTCAGAGATTTGAGTCCACAGAACCATCTACTTTACTTCACCGTGTTATGAAAAAACTCAGAGGCATATATGGTCCTAAAGGTGTTGTTGTACCTGACCCAATACAGACGATTTGCACTAAATGGGGAAGTGATCCTTTCTCATATGGCTCATATTCACATGTAAGGGTTGGTTCATCAGGCGTGGACTACGACATTCTAGCAGAAAGTGTAAATAACCGACTATTCTTCGCTGGTGAGGCCACGACAAGGCAACATCCAGCAACAATGCACGGTGCCTACTTAAGCGGGTTAAGGGAAGCGTCTCGGATTCAACGCGTTGTGAATGTTTCTCGCGGTTACCCGAGGAAGCCTGTCCAGAGATACAGTGGAGTTAGTAACGATGTTCTTGAAGATCTGTTCAAAAGACCCGACATTGCATCTGGACAGTTGTCGTTTGTCTTCAACCCATCAACCGATGATCCGAAATCACTCGGATTAGTCAGAGTTTGCTTTGACAGCTTTGAAGACGATCCAACTAATCATCTTCAGCTTTACGCTATCTTATCATGGGAGCAAGCTCAGAAGCTTCAAGAATTGGGAGAGAGCAGTAATGAAAGCAAGTTGACGTATATGGTGAATACTCTCGGGTTAAAGCTGATGGGTGGCAATGCAGTACTAGACACATGTGGTGCATTGATCAGTGTGATAGCTAACGCACGCAAAGGCAGAAGCAGGACTCGTGTCGTTGCGAGGCACTAA
Protein Sequence
- >A01p052010.1_BraROA
MDNPSSEGSAPRRTLRRKAVRKNYDENAMDEPIETSKKKFKTKQQLEKETETEALIALSVGFPIDELLEDEIRAGVVRELGGKEQNDYIVVRNHIVARWRSNVRVWLLKDRIRESVSSECEHLISAAYEFLLYNGFINFGVSPLFNGYVPEDGSEGSVIVVGAGLAGLAAARQLLSFGFKVVVLEGRSRPGGRVYTQRMGGKERFAAVELGGSVITGLHANPLGVLARQLAIPLHKVRDHCPLYNSEGEVVDKAVDSNVEFGFNKLLDKVAEVREMMGGDANKVSLGEVLETLRVLYGVAKDSEERKLFDWHLANLEYANAGCLSNLSAAYWDQDDPYEMGGDHCFLAGGNWRLINALAEGLPILYGKRVDAIRYGDRGVEVVSGSQRFQGDMILCTVPLGVLKKRCIKFEPELPRKKQAAIDRLGFGLLNKVAMLFPSVFWGDDLDTFGCLNDSSIDRGEFFLFYAYHTVSGGPALVALVAGEAAQRFESTEPSTLLHRVMKKLRGIYGPKGVVVPDPIQTICTKWGSDPFSYGSYSHVRVGSSGVDYDILAESVNNRLFFAGEATTRQHPATMHGAYLSGLREASRIQRVVNVSRGYPRKPVQRYSGVSNDVLEDLFKRPDIASGQLSFVFNPSTDDPKSLGLVRVCFDSFEDDPTNHLQLYAILSWEQAQKLQELGESSNESKLTYMVNTLGLKLMGGNAVLDTCGALISVIANARKGRSRTRVVARH