Information report for A01p008180.1_BraROA
Gene Details
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Functional Annotation
- Encodes a protein with similarity to VRN5 and VIN3.Contains both a fibronectin III and PHD finger domain. VEL1 is a part of a polycomb repressive complex (PRC2) that is involved in epigenetic silencing of the FLC flowering locus.
Homologous
- Brassica napus: BnaA01G0071400ZS, BnaC01G0084500ZS, BnaA08G0156000ZS, BnaC03G0774400ZS, BnaA03G0516300ZS, BnaC07G0495000ZS
- Brassica oleracea: Bo1g014420, Bo3g175710, Bo7g114310
- Brassica rapa: Bra011173, Bra024097, Bra010297
- Gossypium hirsutum: Gohir.A08G019500, Gohir.D08G030100, Gohir.A05G004280, Gohir.D05G005000
- Manihot esculenta: MANES_S055500
- Rosa chinensis: RchiOBHm_Chr4g0401761
Gene Resources
- Pfam: PF07227
Sequences
gDNA Sequence
- >A01p008180.1_BraROA
TGGATTCTTCTCTCGATGGTACTTTCAACTTTTTTCATTCTGGTGTTTCTTTGGTTGTTCAAGATGTATTGATATTCGTGTATCTTTGTTATTCCCTATGTACTATAGTGTTCACAGCTGATGATGAAGCTTTGGATGCTCATTTGTTTTTTTTTTTTTTTTTTAATTATAAAGTTTGAGACTTTACTGTAGTTTTCACTGATTTGCTACTTGATCTAGCTTACTGGCTTCTTAATATTTTTCTTCTTCTATGGTTTCTCTCATTGGTGATTCTGATAAATGGGTCTTTCACTTTTCTTGTTGGTTGGTTCCAACTCCATATTCTTTGTTTATTTCCCCCACTTATATTGGTTGATATATACTATAAGATTTTGTACATAATTTAATCGTGCGTCAAAAGACTTGTATGGGAATAAGATTCCATGAGATGTCACTACTACTGTTAACTTATTGATGAATGTGGGTTCTAATTCTTACCTAACAGAACCCATGCTTTGATTCCTATCTTATTCTCTTCTTTGGCTCTCTTGGTCCATTTCAAAAAAAATCATTCTAAAGAACATGATCTCTCGCTTTGGCATGTTGTTTTGATTCCCTCTTTGACTCCTTGTTCCAACTTCAACATTGTTCTCCTGTGATGTTAGTTGAACTTTGCTTTTTAGTTGCATTTACGCTGAGTTTGGACTGTTGTTTTAAATTTTCACACTATTTTCTTCTATATATATACAGGAGCAGCAGGTGACTCATCAAAATGCAGTCAAATGAGTGTTGATGAGAAGAGACAGCTTGTCTATGATCTCTCCAAGCAATCACACCTAGCTACCGAAGTGTTGCAGGCATGGAGCCGCCAAGAGATTCTACAGATCCTATGCGCTGAAATGGGCAAAGAGAGAAAGTACACTGGCTTGACCAAAGTCAAGATCATCGAAGCTCTTTTGAAACTTGTATCTGAGAAAAACTCAGGAGACTATGATGAGAATAACAAGAAGAACAAGAAGAAGAGAGATTCTGAATGTTTGCCTGTTCAGAGACACACAAAGAGACAAAGGAAAGTCGATGAACCTACTCGTTATGTGGCTCCAACTAGTAACAACAATTCCTCAGGGAGCTGCAACAATGCTGTCTACTGCAACAACTTGGCTTGCAGGGCTATATTGAGAGAGGGAGACTCGTTTTGCAGAAGGTGTTCTTGTTGCATTTGTCGTAAGTACGATGATAACAAAGACCCTAGTCTCTGGTTAACATGCAGCTCAGATCCTCCGTTTGAAGGTGACTCATGCGGATTCTCTTGTCATCTTGAATGTGCTTTCGAGAGTGAAAAGTCTGGTCTTAAGGAAAGTGAGGGTGGTTGCTGCTTCTACTGTGTCTCTTGCGGTAAACCAAACAGCTTGCTTGAGTGTTGGAAGAAGCAACTGACTATTGCTAGAGAAGCCAGAAGGGTGGATGTGCTTTGCTACCGTCTTTTATTAGTCCAGAAGCTTACAAAGGGCTCTAGTAAGTACCGGAACCTGTGTGAGGCTGTTGATGAAGCTGTGAAGAGTCTTGAAGCTGATGTGGGTCCTCTCACTGGTCTCCCTTTGAAAATGGGTAGAGGGATTGTGAACAGACTACAATCAGGACCTGATGTGCAGAAACTTTGCTCTTCTGCTCTTGAATCTCTTGAAACACCTCCTGAAGTTGCTGCATTGCCTTCACCCAGCAGCTCCAAGATGCAACACGGTCAGCTTTTTCTATTACGCAAATAATTTTATAAACTTTTATCCATTTTAGTGATTTTATAAACCTCTATCCGATTTTACAAACTTCTATAAAATGTTTTACCATGTTTTAGTGATAAAAGTATAACATTTTAACTGAAATATAGACGGAGGCTAACATAACATATGTTAACGATTTGTAATTTGAGGTAATTTGAGGGTTTAAAACGTTAAAATATTAGTTGAGGAGTTTCCTTGCGATTCAAAAATAGTTTAGGAGTTTTATCATTTAAAATCCTTTTAATGTATGAATACTAATTGATGATTCTGTTTTTGTTTGCTAGATTGTTATCATGGACTGAACAATGAGGTGTCTGCAGATACAGCAACCACAGTATCAACCAAGATCAGATTCGAGGATGTTAACGCCACTTCACTCACTGTGATTCTAGCCTCCAACGAAGTCACCTCACCTGGGAACATCGTTCATTACAGTATCTGGCATCGTAAGGCCACTGAGAAAGAGTACCAGGAGAAGTCAACTTGCACATTGTTTACACCAAACGCGAGATTTGTTGTCTCTGGATTAGCTCCAGCTTCTGAGTATTGCTTCAAAGTCGTGTCCTATAGCGGAACACGAGAGCTTGGAGTGGATGAGATCAATGTCTTGACGCGTAATGAAGAAGAAAGAAGCGAGAGCCCTCTCACGAACTGCAGCACGTTGTCTTCTAACCCTTCTTCTGTTGAAGCTGAGTCCAACAACGGTTACATTGTTCCTCAGAACGAGATAAAAGATTCTCCTACTGATGAGAATGCTGTTAAAAGGACAACAGAGATTGTGCAGACTGAGAAGAACATTGAAGAAGAAGCTGTTCCAGACAAGAACAGAGAAACTCTAAACCCGGTTACTACGACAAATCTTTTGCCTATTACTCCCTTCAGGTCAGACAAAACCAAGAACCGTCAAGCTAGAAAAGGAAAGTCTGTTAAAGAAAACGGTGATCATCATTCAGCAAACGGAGGATCAGAGAGCGGTTTAGAGCATTGTGTGAAGATCATAAGACAGCTCGAATGTTCAGGACACATTGAGAAAGAGTTCAGACAGAAGTTTCTGACTTGGTATGGCTTGAGAGCGACGCCACAAGAGATTAGAGTTGTGAAGATATTTATAGATACATTTGCTGATGATCCCGTGGCTTTAGCTGAGCAGCTTGTTCATAGTTTCAGCGACCTCGTTTCGAGTAAGCGTTCTGCGATTGGTGGTGGTGGTGCGTCTGCGGTTGTTCAGTCTGGTTTCTGCATGAAGTTGTGGCATTAG
CDS Sequence
- >A01p008180.1_BraROA
ATGGATTCTTCTCTCGATGGAGCAGCAGGTGACTCATCAAAATGCAGTCAAATGAGTGTTGATGAGAAGAGACAGCTTGTCTATGATCTCTCCAAGCAATCACACCTAGCTACCGAAGTGTTGCAGGCATGGAGCCGCCAAGAGATTCTACAGATCCTATGCGCTGAAATGGGCAAAGAGAGAAAGTACACTGGCTTGACCAAAGTCAAGATCATCGAAGCTCTTTTGAAACTTGTATCTGAGAAAAACTCAGGAGACTATGATGAGAATAACAAGAAGAACAAGAAGAAGAGAGATTCTGAATGTTTGCCTGTTCAGAGACACACAAAGAGACAAAGGAAAGTCGATGAACCTACTCGTTATGTGGCTCCAACTAGTAACAACAATTCCTCAGGGAGCTGCAACAATGCTGTCTACTGCAACAACTTGGCTTGCAGGGCTATATTGAGAGAGGGAGACTCGTTTTGCAGAAGGTGTTCTTGTTGCATTTGTCGTAAGTACGATGATAACAAAGACCCTAGTCTCTGGTTAACATGCAGCTCAGATCCTCCGTTTGAAGGTGACTCATGCGGATTCTCTTGTCATCTTGAATGTGCTTTCGAGAGTGAAAAGTCTGGTCTTAAGGAAAGTGAGGGTGGTTGCTGCTTCTACTGTGTCTCTTGCGGTAAACCAAACAGCTTGCTTGAGTGTTGGAAGAAGCAACTGACTATTGCTAGAGAAGCCAGAAGGGTGGATGTGCTTTGCTACCGTCTTTTATTAGTCCAGAAGCTTACAAAGGGCTCTAGTAAGTACCGGAACCTGTGTGAGGCTGTTGATGAAGCTGTGAAGAGTCTTGAAGCTGATGTGGGTCCTCTCACTGGTCTCCCTTTGAAAATGGGTAGAGGGATTGTGAACAGACTACAATCAGGACCTGATGTGCAGAAACTTTGCTCTTCTGCTCTTGAATCTCTTGAAACACCTCCTGAAGTTGCTGCATTGCCTTCACCCAGCAGCTCCAAGATGCAACACGATTGTTATCATGGACTGAACAATGAGGTGTCTGCAGATACAGCAACCACAGTATCAACCAAGATCAGATTCGAGGATGTTAACGCCACTTCACTCACTGTGATTCTAGCCTCCAACGAAGTCACCTCACCTGGGAACATCGTTCATTACAGTATCTGGCATCGTAAGGCCACTGAGAAAGAGTACCAGGAGAAGTCAACTTGCACATTGTTTACACCAAACGCGAGATTTGTTGTCTCTGGATTAGCTCCAGCTTCTGAGTATTGCTTCAAAGTCGTGTCCTATAGCGGAACACGAGAGCTTGGAGTGGATGAGATCAATGTCTTGACGCGTAATGAAGAAGAAAGAAGCGAGAGCCCTCTCACGAACTGCAGCACGTTGTCTTCTAACCCTTCTTCTGTTGAAGCTGAGTCCAACAACGGTTACATTGTTCCTCAGAACGAGATAAAAGATTCTCCTACTGATGAGAATGCTGTTAAAAGGACAACAGAGATTGTGCAGACTGAGAAGAACATTGAAGAAGAAGCTGTTCCAGACAAGAACAGAGAAACTCTAAACCCGGTTACTACGACAAATCTTTTGCCTATTACTCCCTTCAGGTCAGACAAAACCAAGAACCGTCAAGCTAGAAAAGGAAAGTCTGTTAAAGAAAACGGTGATCATCATTCAGCAAACGGAGGATCAGAGAGCGGTTTAGAGCATTGTGTGAAGATCATAAGACAGCTCGAATGTTCAGGACACATTGAGAAAGAGTTCAGACAGAAGTTTCTGACTTGGTATGGCTTGAGAGCGACGCCACAAGAGATTAGAGTTGTGAAGATATTTATAGATACATTTGCTGATGATCCCGTGGCTTTAGCTGAGCAGCTTGTTCATAGTTTCAGCGACCTCGTTTCGAGTAAGCGTTCTGCGATTGGTGGTGGTGGTGCGTCTGCGGTTGTTCAGTCTGGTTTCTGCATGAAGTTGTGGCATTAG
Protein Sequence
- >A01p008180.1_BraROA
MDSSLDGAAGDSSKCSQMSVDEKRQLVYDLSKQSHLATEVLQAWSRQEILQILCAEMGKERKYTGLTKVKIIEALLKLVSEKNSGDYDENNKKNKKKRDSECLPVQRHTKRQRKVDEPTRYVAPTSNNNSSGSCNNAVYCNNLACRAILREGDSFCRRCSCCICRKYDDNKDPSLWLTCSSDPPFEGDSCGFSCHLECAFESEKSGLKESEGGCCFYCVSCGKPNSLLECWKKQLTIAREARRVDVLCYRLLLVQKLTKGSSKYRNLCEAVDEAVKSLEADVGPLTGLPLKMGRGIVNRLQSGPDVQKLCSSALESLETPPEVAALPSPSSSKMQHDCYHGLNNEVSADTATTVSTKIRFEDVNATSLTVILASNEVTSPGNIVHYSIWHRKATEKEYQEKSTCTLFTPNARFVVSGLAPASEYCFKVVSYSGTRELGVDEINVLTRNEEERSESPLTNCSTLSSNPSSVEAESNNGYIVPQNEIKDSPTDENAVKRTTEIVQTEKNIEEEAVPDKNRETLNPVTTTNLLPITPFRSDKTKNRQARKGKSVKENGDHHSANGGSESGLEHCVKIIRQLECSGHIEKEFRQKFLTWYGLRATPQEIRVVKIFIDTFADDPVALAEQLVHSFSDLVSSKRSAIGGGGASAVVQSGFCMKLWH