Gene Details:

  • Gene ID: A01p008180.1_BraROA
  • Suggest Gene Name: VIN3-LIKE 2, VERNALIZATION5/VIN3-LIKE 1
  • Description: putative flowering gene
  • Species: Brassica rapa ro18
  • Source: Putative flowering gene from PlantCFG

Protein Features:

Functional Descriptions:

  • Encodes a protein with similarity to VRN5 and VIN3.Contains both a fibronectin III and PHD finger domain. VEL1 is a part of a polycomb repressive complex (PRC2) that is involved in epigenetic silencing of the FLC flowering locus.

Homologous

Sequences:

gDNA Sequence
  • >A01p008180.1_BraROA
    TGGATTCTTCTCTCGATGGTACTTTCAACTTTTTTCATTCTGGTGTTTCTTTGGTTGTTCAAGATGTATTGATATTCGTGTATCTTTGTTATTCCCTATGTACTATAGTGTTCACAGCTGATGATGAAGCTTTGGATGCTCATTTGTTTTTTTTTTTTTTTTTTAATTATAAAGTTTGAGACTTTACTGTAGTTTTCACTGATTTGCTACTTGATCTAGCTTACTGGCTTCTTAATATTTTTCTTCTTCTATGGTTTCTCTCATTGGTGATTCTGATAAATGGGTCTTTCACTTTTCTTGTTGGTTGGTTCCAACTCCATATTCTTTGTTTATTTCCCCCACTTATATTGGTTGATATATACTATAAGATTTTGTACATAATTTAATCGTGCGTCAAAAGACTTGTATGGGAATAAGATTCCATGAGATGTCACTACTACTGTTAACTTATTGATGAATGTGGGTTCTAATTCTTACCTAACAGAACCCATGCTTTGATTCCTATCTTATTCTCTTCTTTGGCTCTCTTGGTCCATTTCAAAAAAAATCATTCTAAAGAACATGATCTCTCGCTTTGGCATGTTGTTTTGATTCCCTCTTTGACTCCTTGTTCCAACTTCAACATTGTTCTCCTGTGATGTTAGTTGAACTTTGCTTTTTAGTTGCATTTACGCTGAGTTTGGACTGTTGTTTTAAATTTTCACACTATTTTCTTCTATATATATACAGGAGCAGCAGGTGACTCATCAAAATGCAGTCAAATGAGTGTTGATGAGAAGAGACAGCTTGTCTATGATCTCTCCAAGCAATCACACCTAGCTACCGAAGTGTTGCAGGCATGGAGCCGCCAAGAGATTCTACAGATCCTATGCGCTGAAATGGGCAAAGAGAGAAAGTACACTGGCTTGACCAAAGTCAAGATCATCGAAGCTCTTTTGAAACTTGTATCTGAGAAAAACTCAGGAGACTATGATGAGAATAACAAGAAGAACAAGAAGAAGAGAGATTCTGAATGTTTGCCTGTTCAGAGACACACAAAGAGACAAAGGAAAGTCGATGAACCTACTCGTTATGTGGCTCCAACTAGTAACAACAATTCCTCAGGGAGCTGCAACAATGCTGTCTACTGCAACAACTTGGCTTGCAGGGCTATATTGAGAGAGGGAGACTCGTTTTGCAGAAGGTGTTCTTGTTGCATTTGTCGTAAGTACGATGATAACAAAGACCCTAGTCTCTGGTTAACATGCAGCTCAGATCCTCCGTTTGAAGGTGACTCATGCGGATTCTCTTGTCATCTTGAATGTGCTTTCGAGAGTGAAAAGTCTGGTCTTAAGGAAAGTGAGGGTGGTTGCTGCTTCTACTGTGTCTCTTGCGGTAAACCAAACAGCTTGCTTGAGTGTTGGAAGAAGCAACTGACTATTGCTAGAGAAGCCAGAAGGGTGGATGTGCTTTGCTACCGTCTTTTATTAGTCCAGAAGCTTACAAAGGGCTCTAGTAAGTACCGGAACCTGTGTGAGGCTGTTGATGAAGCTGTGAAGAGTCTTGAAGCTGATGTGGGTCCTCTCACTGGTCTCCCTTTGAAAATGGGTAGAGGGATTGTGAACAGACTACAATCAGGACCTGATGTGCAGAAACTTTGCTCTTCTGCTCTTGAATCTCTTGAAACACCTCCTGAAGTTGCTGCATTGCCTTCACCCAGCAGCTCCAAGATGCAACACGGTCAGCTTTTTCTATTACGCAAATAATTTTATAAACTTTTATCCATTTTAGTGATTTTATAAACCTCTATCCGATTTTACAAACTTCTATAAAATGTTTTACCATGTTTTAGTGATAAAAGTATAACATTTTAACTGAAATATAGACGGAGGCTAACATAACATATGTTAACGATTTGTAATTTGAGGTAATTTGAGGGTTTAAAACGTTAAAATATTAGTTGAGGAGTTTCCTTGCGATTCAAAAATAGTTTAGGAGTTTTATCATTTAAAATCCTTTTAATGTATGAATACTAATTGATGATTCTGTTTTTGTTTGCTAGATTGTTATCATGGACTGAACAATGAGGTGTCTGCAGATACAGCAACCACAGTATCAACCAAGATCAGATTCGAGGATGTTAACGCCACTTCACTCACTGTGATTCTAGCCTCCAACGAAGTCACCTCACCTGGGAACATCGTTCATTACAGTATCTGGCATCGTAAGGCCACTGAGAAAGAGTACCAGGAGAAGTCAACTTGCACATTGTTTACACCAAACGCGAGATTTGTTGTCTCTGGATTAGCTCCAGCTTCTGAGTATTGCTTCAAAGTCGTGTCCTATAGCGGAACACGAGAGCTTGGAGTGGATGAGATCAATGTCTTGACGCGTAATGAAGAAGAAAGAAGCGAGAGCCCTCTCACGAACTGCAGCACGTTGTCTTCTAACCCTTCTTCTGTTGAAGCTGAGTCCAACAACGGTTACATTGTTCCTCAGAACGAGATAAAAGATTCTCCTACTGATGAGAATGCTGTTAAAAGGACAACAGAGATTGTGCAGACTGAGAAGAACATTGAAGAAGAAGCTGTTCCAGACAAGAACAGAGAAACTCTAAACCCGGTTACTACGACAAATCTTTTGCCTATTACTCCCTTCAGGTCAGACAAAACCAAGAACCGTCAAGCTAGAAAAGGAAAGTCTGTTAAAGAAAACGGTGATCATCATTCAGCAAACGGAGGATCAGAGAGCGGTTTAGAGCATTGTGTGAAGATCATAAGACAGCTCGAATGTTCAGGACACATTGAGAAAGAGTTCAGACAGAAGTTTCTGACTTGGTATGGCTTGAGAGCGACGCCACAAGAGATTAGAGTTGTGAAGATATTTATAGATACATTTGCTGATGATCCCGTGGCTTTAGCTGAGCAGCTTGTTCATAGTTTCAGCGACCTCGTTTCGAGTAAGCGTTCTGCGATTGGTGGTGGTGGTGCGTCTGCGGTTGTTCAGTCTGGTTTCTGCATGAAGTTGTGGCATTAG
CDS Sequence
  • >A01p008180.1_BraROA
    ATGGATTCTTCTCTCGATGGAGCAGCAGGTGACTCATCAAAATGCAGTCAAATGAGTGTTGATGAGAAGAGACAGCTTGTCTATGATCTCTCCAAGCAATCACACCTAGCTACCGAAGTGTTGCAGGCATGGAGCCGCCAAGAGATTCTACAGATCCTATGCGCTGAAATGGGCAAAGAGAGAAAGTACACTGGCTTGACCAAAGTCAAGATCATCGAAGCTCTTTTGAAACTTGTATCTGAGAAAAACTCAGGAGACTATGATGAGAATAACAAGAAGAACAAGAAGAAGAGAGATTCTGAATGTTTGCCTGTTCAGAGACACACAAAGAGACAAAGGAAAGTCGATGAACCTACTCGTTATGTGGCTCCAACTAGTAACAACAATTCCTCAGGGAGCTGCAACAATGCTGTCTACTGCAACAACTTGGCTTGCAGGGCTATATTGAGAGAGGGAGACTCGTTTTGCAGAAGGTGTTCTTGTTGCATTTGTCGTAAGTACGATGATAACAAAGACCCTAGTCTCTGGTTAACATGCAGCTCAGATCCTCCGTTTGAAGGTGACTCATGCGGATTCTCTTGTCATCTTGAATGTGCTTTCGAGAGTGAAAAGTCTGGTCTTAAGGAAAGTGAGGGTGGTTGCTGCTTCTACTGTGTCTCTTGCGGTAAACCAAACAGCTTGCTTGAGTGTTGGAAGAAGCAACTGACTATTGCTAGAGAAGCCAGAAGGGTGGATGTGCTTTGCTACCGTCTTTTATTAGTCCAGAAGCTTACAAAGGGCTCTAGTAAGTACCGGAACCTGTGTGAGGCTGTTGATGAAGCTGTGAAGAGTCTTGAAGCTGATGTGGGTCCTCTCACTGGTCTCCCTTTGAAAATGGGTAGAGGGATTGTGAACAGACTACAATCAGGACCTGATGTGCAGAAACTTTGCTCTTCTGCTCTTGAATCTCTTGAAACACCTCCTGAAGTTGCTGCATTGCCTTCACCCAGCAGCTCCAAGATGCAACACGATTGTTATCATGGACTGAACAATGAGGTGTCTGCAGATACAGCAACCACAGTATCAACCAAGATCAGATTCGAGGATGTTAACGCCACTTCACTCACTGTGATTCTAGCCTCCAACGAAGTCACCTCACCTGGGAACATCGTTCATTACAGTATCTGGCATCGTAAGGCCACTGAGAAAGAGTACCAGGAGAAGTCAACTTGCACATTGTTTACACCAAACGCGAGATTTGTTGTCTCTGGATTAGCTCCAGCTTCTGAGTATTGCTTCAAAGTCGTGTCCTATAGCGGAACACGAGAGCTTGGAGTGGATGAGATCAATGTCTTGACGCGTAATGAAGAAGAAAGAAGCGAGAGCCCTCTCACGAACTGCAGCACGTTGTCTTCTAACCCTTCTTCTGTTGAAGCTGAGTCCAACAACGGTTACATTGTTCCTCAGAACGAGATAAAAGATTCTCCTACTGATGAGAATGCTGTTAAAAGGACAACAGAGATTGTGCAGACTGAGAAGAACATTGAAGAAGAAGCTGTTCCAGACAAGAACAGAGAAACTCTAAACCCGGTTACTACGACAAATCTTTTGCCTATTACTCCCTTCAGGTCAGACAAAACCAAGAACCGTCAAGCTAGAAAAGGAAAGTCTGTTAAAGAAAACGGTGATCATCATTCAGCAAACGGAGGATCAGAGAGCGGTTTAGAGCATTGTGTGAAGATCATAAGACAGCTCGAATGTTCAGGACACATTGAGAAAGAGTTCAGACAGAAGTTTCTGACTTGGTATGGCTTGAGAGCGACGCCACAAGAGATTAGAGTTGTGAAGATATTTATAGATACATTTGCTGATGATCCCGTGGCTTTAGCTGAGCAGCTTGTTCATAGTTTCAGCGACCTCGTTTCGAGTAAGCGTTCTGCGATTGGTGGTGGTGGTGCGTCTGCGGTTGTTCAGTCTGGTTTCTGCATGAAGTTGTGGCATTAG
Protein Sequence
  • >A01p008180.1_BraROA
    MDSSLDGAAGDSSKCSQMSVDEKRQLVYDLSKQSHLATEVLQAWSRQEILQILCAEMGKERKYTGLTKVKIIEALLKLVSEKNSGDYDENNKKNKKKRDSECLPVQRHTKRQRKVDEPTRYVAPTSNNNSSGSCNNAVYCNNLACRAILREGDSFCRRCSCCICRKYDDNKDPSLWLTCSSDPPFEGDSCGFSCHLECAFESEKSGLKESEGGCCFYCVSCGKPNSLLECWKKQLTIAREARRVDVLCYRLLLVQKLTKGSSKYRNLCEAVDEAVKSLEADVGPLTGLPLKMGRGIVNRLQSGPDVQKLCSSALESLETPPEVAALPSPSSSKMQHDCYHGLNNEVSADTATTVSTKIRFEDVNATSLTVILASNEVTSPGNIVHYSIWHRKATEKEYQEKSTCTLFTPNARFVVSGLAPASEYCFKVVSYSGTRELGVDEINVLTRNEEERSESPLTNCSTLSSNPSSVEAESNNGYIVPQNEIKDSPTDENAVKRTTEIVQTEKNIEEEAVPDKNRETLNPVTTTNLLPITPFRSDKTKNRQARKGKSVKENGDHHSANGGSESGLEHCVKIIRQLECSGHIEKEFRQKFLTWYGLRATPQEIRVVKIFIDTFADDPVALAEQLVHSFSDLVSSKRSAIGGGGASAVVQSGFCMKLWH