Gene Details:

  • Gene ID: A01p004250.1_BraROA
  • Suggest Gene Name: CRYPTOCHROME-INTERACTING BASIC-HELIX-LOOP-HELIX 1
  • Description: putative flowering gene
  • Species: Brassica rapa ro18
  • Source: Putative flowering gene from PlantCFG

Protein Features:

Functional Descriptions:

  • Encodes a transcription factor CIB1 (cryptochrome-interacting basic-helix-loop-helix). CIB1 interacts with CRY2 (cryptochrome 2) in a blue light-specific manner in yeast and Arabidopsis cells, and it acts together with additional CIB1-related proteins to promote CRY2-dependent floral initiation. CIB1 positively regulates FT expression.

Homologous

Sequences:

gDNA Sequence
  • >A01p004250.1_BraROA
    CAAACTCCTAGACTGCTATAAAGATTCTGCACATCAGAGTCCCACATAGTAGCAGATTGACCATTCTGTAACATAACCAAACACACATAGATTATTAGTAAACCAAAAGTTATAGGATAAGCTTCATAATGGAAGAGAAATGAAAACATAACCTACGTTGAAACATGCAAGTGGATCAGAACTGGTAACCACTTGCTGCATTGGATTGAAATGAACATAACCGGAATTAACCATATCATGAGGATAACCGGAATTCACCATCATATGAGGTGGCATCACAGTGTTTGGTAAGTTCATCATTGGAGCTGAGACAACCTGGATTCAATTTATATTAGCCCATCTAATAATTCTATAAATTAAAGCTTTTACATACAAACAAATTAAAAAAAAAAAAGACTAACCTCTTTGGCAAAAATGTCATCGATGTTGAAATCCAGCCTTGGACTAACAGTTGCTAGCTTCATTGATAAGAACTGATCCAAACATGAACCATATATTAGGTTACAAATTATCAAATAATATTTCTAGTCGTACAAGATACATAGGAAATGAATTGCGAACCTCGACTTGTCGCTGGAGAGACTGAACATAGTTAATGATCTCATCAAGCATCCCTGCTTTGCCTGTAATCTTTTCGCATCCAGGAACCAAATCTTGTAGAAACTTCATTCTCTCACTGATCTTTTCTCTTCTAGCCTTCACAGATTTAACAATAAAATTAGTCTTTAAATATTTTCAGAATATTAAGCTACTAAATGAAACTAATTAATAAAGTCTCTCTCTCTCACTCGTTCAGCAATGCTGTGGCTATCAGTGGCTTGGCCTCTCCGTGCACGAACGTGAATATAATCCGTCCTCTGCGAGTCTTTCGTCACTTTTGACGAGTCGTTAGAACAACTGTTCTGTTCTTTCTTGGCTTTGTTCTTCATCTTCATGATGCTTTTAGTGCTCTGCTCCGTTATTTTTGACTTCTCTTCTTCTTCTTCAACTTCTACTTCTCTGTCCATCATCATCATCTTCTTCTTCTCATTAAAAACCTAAAAAACCATTAACAGACAAAGTGAATCTCAAAGTAAGATCTGTTTTTTTTATTCAGAGTTTTAGTTTCTTTAAGCAACATGCGAACCTTAGTCTCTGTATCGACACAACCAAACTTCCTTTTCTTGGAATTTCCAGACTCGTTTGTAATATTTCCTGGAGAAACTGAGATTCTCGCATCACCGTGCACCTCCCCGTAAATCTCCGGAAGATCCAAACCGGCCGACGCTAGAAAGCCGTCGTCAATCTCGCCGCCGTTGATCGTGGAAGAATTGGAGAAGAAGCCGGGAAGGTGGTGGTAGTTTAGTTGAGCCCTTTGGCGCTCTAAGACAGACATGTCGGCACAGTTGAGGAAAAGCTCAGCTTCTGTAGCTTCTCCGTTCATCATCATCAT
CDS Sequence
  • >A01p004250.1_BraROA
    ATGATGATGATGAACGGAGAAGCTACAGAAGCTGAGCTTTTCCTCAACTGTGCCGACATGTCTGTCTTAGAGCGCCAAAGGGCTCAACTAAACTACCACCACCTTCCCGGCTTCTTCTCCAATTCTTCCACGATCAACGGCGGCGAGATTGACGACGGCTTTCTAGCGTCGGCCGGTTTGGATCTTCCGGAGATTTACGGGGAGGTGCACGGTGATGCGAGAATCTCAGTTTCTCCAGGAAATATTACAAACGAGTCTGGAAATTCCAAGAAAAGGAAGTTTGGTTGTGTCGATACAGAGACTAAGGTTTTTAATGAGAAGAAGAAGATGATGATGATGGACAGAGAAGTAGAAGTTGAAGAAGAAGAAGAGAAGTCAAAAATAACGGAGCAGAGCACTAAAAGCATCATGAAGATGAAGAACAAAGCCAAGAAAGAACAGAACAGTTGTTCTAACGACTCGTCAAAAGTGACGAAAGACTCGCAGAGGACGGATTATATTCACGTTCGTGCACGGAGAGGCCAAGCCACTGATAGCCACAGCATTGCTGAACGAGCTAGAAGAGAAAAGATCAGTGAGAGAATGAAGTTTCTACAAGATTTGGTTCCTGGATGCGAAAAGATTACAGGCAAAGCAGGGATGCTTGATGAGATCATTAACTATGTTCAGTCTCTCCAGCGACAAGTCGAGTTCTTATCAATGAAGCTAGCAACTGTTAGTCCAAGGCTGGATTTCAACATCGATGACATTTTTGCCAAAGAGGTTGTCTCAGCTCCAATGATGAACTTACCAAACACTGTGATGCCACCTCATATGATGGTGAATTCCGGTTATCCTCATGATATGGTTAATTCCGGTTATGTTCATTTCAATCCAATGCAGCAAGTGGTTACCAGTTCTGATCCACTTGCATGTTTCAACAATGGTCAATCTGCTACTATGTGGGACTCTGATGTGCAGAATCTTTATAGCAGTCTAGGAGTTTGA
Protein Sequence
  • >A01p004250.1_BraROA
    MMMMNGEATEAELFLNCADMSVLERQRAQLNYHHLPGFFSNSSTINGGEIDDGFLASAGLDLPEIYGEVHGDARISVSPGNITNESGNSKKRKFGCVDTETKVFNEKKKMMMMDREVEVEEEEEKSKITEQSTKSIMKMKNKAKKEQNSCSNDSSKVTKDSQRTDYIHVRARRGQATDSHSIAERARREKISERMKFLQDLVPGCEKITGKAGMLDEIINYVQSLQRQVEFLSMKLATVSPRLDFNIDDIFAKEVVSAPMMNLPNTVMPPHMMVNSGYPHDMVNSGYVHFNPMQQVVTSSDPLACFNNGQSATMWDSDVQNLYSSLGV