Gene Details:

  • Gene ID: A01g510400.1_BraROA
  • Suggest Gene Name: SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 5
  • Description: putative flowering gene
  • Species: Brassica rapa ro18
  • Source: Putative flowering gene from PlantCFG

Protein Features:

Functional Descriptions:

  • Encodes a member of the SPL (squamosa-promoter binding protein-like)gene family, a novel gene family encoding DNA binding proteins and putative transcription factors. Contains the SBP-box, which encodes the SBP-domain, required and sufficient for interaction with DNA. It is involved in regulation of flowering and vegetative phase change. Its temporal expression is regulated by the microRNA miR156. The target site for the microRNA is in the 3’UTR.

Homologous

Sequences:

gDNA Sequence
  • >A01g510400.1_BraROA
    TGGAGAAATCACAAAGCTGGAGTTACGTGAAAGACAAGGCTATAGTCTCCAACCTTGCTGAACAAGAATGGGAGAATAGCATGGATGGAGAAGAGGAGGATGCAGGAGATGAAGACAAAAGGAAGAGAGTGATGGAGAGAGCTAGGGGTACTAACACAGACCGTGTTCCACCGCGGCTATGCCAGGTCCATAGGTGCACTGCTAATTTAACTGAAGCCAAGCAGTATTACCGCAGACACAAAGTCTGTGAAGTTCATGCAAAGGCATCTGCTGCAACTGTTTCAGGCGCCAAGCAACGTTTTTGTCAACAATGCAGCAGGTACCATTCTTCCCATCAATATTACTTTCTAAAGTTTATTAAGAAGTTTGTGTTTCGATTTGATACTTTGGGCATGGGTTGGGTTTGACCAGGTTTCATGAGCTACCAGAGTTTGATGAAGCTAAAAGAAGTTGCCGGATGCGCCTAGCTGGACACAATGAGAGGAGAAGGAAGGTTTCTGGTGACAGTTTCGGCGAAAGGTCAGGCCGAAGAGGGTTTAGCAGTCAACTGATCCAGACTCAAGAAAGAAACAAGGTAGACATTAAATTTCCTATGGCCAACACATCATTCAAACGACCATAG
CDS Sequence
  • >A01g510400.1_BraROA
    ATGGAGAAATCACAAAGCTGGAGTTACGTGAAAGACAAGGCTATAGTCTCCAACCTTGCTGAACAAGAATGGGAGAATAGCATGGATGGAGAAGAGGAGGATGCAGGAGATGAAGACAAAAGGAAGAGAGTGATGGAGAGAGCTAGGGGTACTAACACAGACCGTGTTCCACCGCGGCTATGCCAGGTCCATAGGTGCACTGCTAATTTAACTGAAGCCAAGCAGTATTACCGCAGACACAAAGTCTGTGAAGTTCATGCAAAGGCATCTGCTGCAACTGTTTCAGGCGCCAAGCAACGTTTTTGTCAACAATGCAGCAGGTTTCATGAGCTACCAGAGTTTGATGAAGCTAAAAGAAGTTGCCGGATGCGCCTAGCTGGACACAATGAGAGGAGAAGGAAGGTTTCTGGTGACAGTTTCGGCGAAAGGTCAGGCCGAAGAGGGTTTAGCAGTCAACTGATCCAGACTCAAGAAAGAAACAAGGTAGACATTAAATTTCCTATGGCCAACACATCATTCAAACGACCATAG
Protein Sequence
  • >A01g510400.1_BraROA
    MEKSQSWSYVKDKAIVSNLAEQEWENSMDGEEEDAGDEDKRKRVMERARGTNTDRVPPRLCQVHRCTANLTEAKQYYRRHKVCEVHAKASAATVSGAKQRFCQQCSRFHELPEFDEAKRSCRMRLAGHNERRRKVSGDSFGERSGRRGFSSQLIQTQERNKVDIKFPMANTSFKRP