Information report for PSY2
Gene Details
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Functional Descriptions
- PSY3 was the only paralog for which transcripts were induced in roots and abiotic stress also affected leaf PSY2 transcript levels; PSY1 mRNA was not elevated in any tissues tested.
- We show that both maize and rice possess and express products from duplicate PSY genes, PSY1 (Y1) and PSY2; PSY1 transcript accumulation correlates with carotenoid-containing endosperm.
Functional Keywords
- leaf , endosperm , abiotic-stress , root
Literature and News
- Gene duplication in the carotenoid biosynthetic pathway preceded evolution of the grasses . DOI: 10.1104/pp.104.039818 ; PMID: 15247400
- PSY3, a new member of the phytoene synthase gene family conserved in the Poaceae and regulator of abiotic stress-induced root carotenogenesis . DOI: 10.1104/pp.107.111120 ; PMID: 18162592
- A third phytoene synthase is devoted to abiotic stress-induced abscisic acid formation in rice and defines functional diversification of phytoene synthase genes . DOI: 10.1104/pp.108.117028 ; PMID: 18326788
Gene Resources
Sequences
cDNA Sequence
- >LOC_Os12g43130.1
TTCCACACGAACACACAACCCCAACCATTCGACCCGCGCAGCGAGCCCCAACCCCACATCGCCGCGCGCCCCCGATGGCGTCCTCCTCGTCGGCGGCGGCGCTCTGGACGGCGGCGCCCCACCCCCACGGCAGCTGCATCAGGATCCACGCCATCTTCCACCAGCGTCACCAGCGGAGGGGGAGGAGGCCGGTCGTCGTCGCCTCGTCGGTGAGGCCGCTGCAGGCCGCGAGCCTGGCGGTGGCCACGGCGCCGGTGGCCGTGGCGTCGAGGAGGACGGCGGCGGAGGAGGCCGTCTACGAGGTCGTGCTGCGGCAGGCGGCGCTGGTGGAGGAGGCCACCCACCGCCGCGGCGCGGGGGCGCCGCGGTGGGCGGAGGAGGACGCCGTCGACTGGGGCCTCCTCCTCGGCGACGCCTACCACCGCTGCGGCGAGGTCTGCGCCGAGTACGCCAAGACCTTCTACCTAGGTACTCAGCTTATGACTCCTGAAAGGCGCAAAGCTGTCTGGGCAATCTATGTATGGTGCAGAAGAACTGATGAACTGGTAGATGGCCCTAACTCGTCTTACATTACACCAAAGGCACTTGATCGATGGGAGAAGAGATTAGAAGATCTCTTCGAAGGCAGGCCATATGATATGTATGATGCAGCCCTCTCGGACACAGTGTCAAAGTTTCCAGTAGATATCCAGCCATTCAAAGACATGATTGAAGGAATGAGGCTTGACCTGTGGAAATCAAGGTATAGGAGCTTTGATGAGCTCTACCTCTACTGCTACTACGTTGCTGGCACGGTTGGTCTCATGACAGTACCGGTGATGGGGATTGCCCCCGACTCGAAGGCCTCAACCGAGAGCGTGTACAACGCTGCGCTAGCTCTTGGGATCGCCAACCAGCTGACGAATATTCTCAGAGACGTAGGCGAAGACTCAAGGAGGGGAAGAATCTACCTTCCATTGGATGAATTGGCAGAGGCAGGTCTGACAGAAGAAGACATATTCAGAGGGAAAGTGACTGATAAATGGAGGAAGTTCATGAAGGGACAAATTCTGCGTGCCAGGTTATTCTTTGATGAGGCGGAGAAGGGCGTTGCGCATCTAGACTCTGCGAGTAGATGGCCGGTTCTGGCATCTTTGTGGTTATACCGGCAGATCCTTGATGCTATCGAAGCAAACGACTACAACAACTTCACCAAGCGCGCGTATGTAAACAAGGCAAAGAAGCTGCTGTCTTTACCGGTCGCTTATGCAAGAGCGGCAGTTGCATCATGAACAATCACTAGATCAGATGCCTTATTATTTTTTTTCTTTCATTTTCTTTTCTTTTGATTTCGCACGATTTCTTGGCTGTTGTATATATTCAAGCAGCTACCTGTATGCCATAAGCCTGCCACAGTTTTTCTTTAGTTCAAGGGACTGATTTCAGGTCCCTCAATACTCAACTCTTGTTAGAAACAAATACAGAGGGGGTAAGCCCCACAGTTCAAGAAGCATATTACTCTTCATTTGTCTTCAAGAA
CDS Sequence
- >LOC_Os12g43130.1
ATGGCGTCCTCCTCGTCGGCGGCGGCGCTCTGGACGGCGGCGCCCCACCCCCACGGCAGCTGCATCAGGATCCACGCCATCTTCCACCAGCGTCACCAGCGGAGGGGGAGGAGGCCGGTCGTCGTCGCCTCGTCGGTGAGGCCGCTGCAGGCCGCGAGCCTGGCGGTGGCCACGGCGCCGGTGGCCGTGGCGTCGAGGAGGACGGCGGCGGAGGAGGCCGTCTACGAGGTCGTGCTGCGGCAGGCGGCGCTGGTGGAGGAGGCCACCCACCGCCGCGGCGCGGGGGCGCCGCGGTGGGCGGAGGAGGACGCCGTCGACTGGGGCCTCCTCCTCGGCGACGCCTACCACCGCTGCGGCGAGGTCTGCGCCGAGTACGCCAAGACCTTCTACCTAGGTACTCAGCTTATGACTCCTGAAAGGCGCAAAGCTGTCTGGGCAATCTATGTATGGTGCAGAAGAACTGATGAACTGGTAGATGGCCCTAACTCGTCTTACATTACACCAAAGGCACTTGATCGATGGGAGAAGAGATTAGAAGATCTCTTCGAAGGCAGGCCATATGATATGTATGATGCAGCCCTCTCGGACACAGTGTCAAAGTTTCCAGTAGATATCCAGCCATTCAAAGACATGATTGAAGGAATGAGGCTTGACCTGTGGAAATCAAGGTATAGGAGCTTTGATGAGCTCTACCTCTACTGCTACTACGTTGCTGGCACGGTTGGTCTCATGACAGTACCGGTGATGGGGATTGCCCCCGACTCGAAGGCCTCAACCGAGAGCGTGTACAACGCTGCGCTAGCTCTTGGGATCGCCAACCAGCTGACGAATATTCTCAGAGACGTAGGCGAAGACTCAAGGAGGGGAAGAATCTACCTTCCATTGGATGAATTGGCAGAGGCAGGTCTGACAGAAGAAGACATATTCAGAGGGAAAGTGACTGATAAATGGAGGAAGTTCATGAAGGGACAAATTCTGCGTGCCAGGTTATTCTTTGATGAGGCGGAGAAGGGCGTTGCGCATCTAGACTCTGCGAGTAGATGGCCGGTTCTGGCATCTTTGTGGTTATACCGGCAGATCCTTGATGCTATCGAAGCAAACGACTACAACAACTTCACCAAGCGCGCGTATGTAAACAAGGCAAAGAAGCTGCTGTCTTTACCGGTCGCTTATGCAAGAGCGGCAGTTGCATCATGA
Protein Sequence
- >LOC_Os12g43130.1
MASSSSAAALWTAAPHPHGSCIRIHAIFHQRHQRRGRRPVVVASSVRPLQAASLAVATAPVAVASRRTAAEEAVYEVVLRQAALVEEATHRRGAGAPRWAEEDAVDWGLLLGDAYHRCGEVCAEYAKTFYLGTQLMTPERRKAVWAIYVWCRRTDELVDGPNSSYITPKALDRWEKRLEDLFEGRPYDMYDAALSDTVSKFPVDIQPFKDMIEGMRLDLWKSRYRSFDELYLYCYYVAGTVGLMTVPVMGIAPDSKASTESVYNAALALGIANQLTNILRDVGEDSRRGRIYLPLDELAEAGLTEEDIFRGKVTDKWRKFMKGQILRARLFFDEAEKGVAHLDSASRWPVLASLWLYRQILDAIEANDYNNFTKRAYVNKAKKLLSLPVAYARAAVAS*