Gene Details:

Functional Descriptions:

  • A 22-bp deletion in OsPLS3 gene encoding a DUF266-containing protein is implicated in rice leaf senescence.
  • OsPLS3 regulates the onset of leaf senescence in rice.
  • Through map-based cloning strategy, we determined that 22-bp deletion in the OsPLS3 gene encoding a domain of unknown function 266 (DUF266)-containing protein, a member of GT14-like, underlies the premature leaf senescence phenotype in the OsPLS3 mutant.
  • The OsPLS3 mRNA levels progressively declined with the age-dependent leaf senescence in wild-type rice, implying a negative role of OsPLS3 in regulating leaf senescence.
  • Our results indicated that the DUF266-containing gene OsPLS3 plays an important role in the onset of leaf senescence, in part through cytokinin and ethylene signaling in rice.
  • Key message The OsPLS3 locus was isolated by map-based cloning that encodes a DUF266-containing protein.
  • Physiological analysis, and histochemical staining and transmission electron microscopy assays indicated that the OsPLS3 mutant accumulated higher levels of ethylene and reactive oxygen species than its wild type.
  • Compared to the wild type IR64, the spotted-leaf mutant spl21 exhibited loss of chlorophyll, breakdown of chloroplasts, down-regulation of photosynthesis-related genes, and up-regulation of senescence associated genes, which indicated that OsGCNT regulates premature leaf senescence.
  • High throughput RNA sequencing analysis provided further evidence for the biological effects of loss of OsGCNT function on cell death, premature leaf senescence and enhanced disease resistance in rice.
  • Thus, we demonstrated that the novel OsGCNT regulated rice innate immunity and immunity-associated leaf senescence probably by changing the jasmonate metabolic pathway.
  • Functional inactivation of OsGCNT induces enhanced disease resistance to Xanthomonas oryzae pv. oryzae in rice.
  • oryzae, up-regulation of pathogenesis-related genes and increased level of jasmonate which suggested that OsGCNT is a negative regulator of defense response in rice.

Literature:

Gene Resources:

  • NCBI ID:
  • UniProt accessions:

Sequences:

cDNA Sequence
  • >LOC_Os12g42420.1
    TCCTCTCCTCTCCTCTCCTCTCCTCTTCTTCTCCCTCCAAAAATCTCCTCCTCCGCTTCACTCGCTCCCCTTCCCTCCATTCCATTCCCTTCCTCTTCGCCCGCCGCGAGATCGGTAGACCAAATTAACCACACTCGCGCCGCCATTCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCAGTTGAGCTGCTTGTCCCGAGCTCTGCTCGTTTCTTGGCGTCTTCTTTCTTCTTCTTCCTCCTCGGTGCGGTTGCGGTTTCGTTTTCGTTTTCTTTCCCCTTTTTCTGTCGGTTAATTCGGCGACGTCTGATCCGCCATGAGAGCGAGCAGTTTGTTCACTCAGTTCCCCTTCGTCTGATACTGATCCCTCCTCACTCTCTGCTCGATTTCTCATCGTCTCTGTAAGCAAGATCCGATCCCCGGAGGCCAAAACCCCTCCCGAATCGCGTGGTTCTTGTTTGTTCTAATCATCCTTCGATTGGGTTGGGTTGAGCAATCGATTGCGTTGTTGTTCTTGCTGATCCGAAGATCCAAAGGAGGAGGAGGAGCTTGAGGTTGAAATTTCTCGCCGGAGATGGCGCTGCCGCACGCCGCCTCGCCGTACGTGCTGTCGCTGCTGCTGCTGCTCTCCATCCCGGCGGTGTTCCTCCTCGCGCCGCGCCTCCTCCCGCCCAAGACGCTCCCCTCCATCCCCGACGCCGACGAGACCGACGACCTCGCCCTCTTCCGCCGCGCCGTCCTCCTCTCCGCCGCCCCGGACTCCTCCTCCGCCTCCGCCGGCGCCGCCTCCCTCTTCGGGCGGCGGCCGCAGCCCAAGGTGGCGTTCCTCTTCCTGACCAACTCCGACCTCGTCTTCTCCCCGCTCTGGGAGAAGTACTTCGCCGGGAACCACCACCTCCTCAACCTCTACATCCACGCCGACCCCAGCGCCGCCGTCGACCTCCCCGCCACCGCCTCCTTCCGCGGCCACGTCATCCGCGGCACCAAGGCGACGGCGCGCGCCTCGGCCACGCTCATCTCCGCCGCGCGCCGCCTCCTCGCCACCGCCCTCCTCGACGACCCATCGAACCACTTCTTCGCCCTCCTCTCCCAGTCCTGCATCCCCCTCCACCCTTTCCCCACCTTCTACCGCACCCTCCTCTCCGACAGCGACAACAATGGCGGCTCGCCTCGCCGCCCCCGCCGCCGCCGCAGCTTCATCGAGATCCTCGACAACGAGCCGACGCTCCACGACCGCTACTACGCCCGCGGCGACGACGTGATGCTACCCGAGGTGCCCTACGACAGCTTCCGCGTCGGCTCGCAGTTCTTCGTGCTCGTGCGCCGCCACGCCGTCATGGTGGTGAGGGATCGGAGGCTGTGGAACAAGTTCAAGCTGCCATGCCTGACCAAGAGGAAGGACTCGTGCTACCCGGAGGAGCACTACTTCCCGACGCTGCTCGACATGCAGGATCCGCAGGGATGCACCAAGTTCACGCTCACCAGGGTCAATTGGACCGACTCCGTCGACGGCCACCCGCACACCTACCGCCCCGACGAGGTCTCCGGCGAGCTCATCAGGGAGCTCAGGAAGTCCAATGGGACTCACTCCTACATGTTCGCGCGCAAATTCGCGCCCGATTGCCTCAAGCCACTGATGGAGATCGCCGACTCCGTCATCCTGCGAGACTAGATGAATGATGCTGTGTTTGCAAGAGATGAATGCAATGAGGGCTGAGATGTGATGAACAAGCATAAGCTGATCCATCCATACCCTTGCAGATTCTCCAGAGAGTACAAACCAGGACCAAGCCTTGGTTTGCTTTGTTTTCTTCAACTGCACTCGTCAAAAAGATGGTGCTTCTCGAGAGAGCATGATGGTTGGTGTTGGTGGCAAAAGGGCCCCAGCTGCCTCCTATGTGAGTATTTTTCTCTGTATCTTTTGTTTTCCCTTTCGAATTTGAGCTCAAGTGGTGGCCAAAATGAGGAGGGGAGAAGGTTGTTGGCACGTAATTAGAGTAGTAGTTAGCATGATCATCCTATGTATTACATGGAGGAAAATCTGTCGATACATGCAGTGATGGTTTGTAGTGTATGTTTATATACAATATGTCAATATCAAGCCCTTTTTTTCGTCCGAAATGTATCGTTTGTATCATGGAAAACCTA
CDS Sequence
  • >LOC_Os12g42420.1
    ATGGCGCTGCCGCACGCCGCCTCGCCGTACGTGCTGTCGCTGCTGCTGCTGCTCTCCATCCCGGCGGTGTTCCTCCTCGCGCCGCGCCTCCTCCCGCCCAAGACGCTCCCCTCCATCCCCGACGCCGACGAGACCGACGACCTCGCCCTCTTCCGCCGCGCCGTCCTCCTCTCCGCCGCCCCGGACTCCTCCTCCGCCTCCGCCGGCGCCGCCTCCCTCTTCGGGCGGCGGCCGCAGCCCAAGGTGGCGTTCCTCTTCCTGACCAACTCCGACCTCGTCTTCTCCCCGCTCTGGGAGAAGTACTTCGCCGGGAACCACCACCTCCTCAACCTCTACATCCACGCCGACCCCAGCGCCGCCGTCGACCTCCCCGCCACCGCCTCCTTCCGCGGCCACGTCATCCGCGGCACCAAGGCGACGGCGCGCGCCTCGGCCACGCTCATCTCCGCCGCGCGCCGCCTCCTCGCCACCGCCCTCCTCGACGACCCATCGAACCACTTCTTCGCCCTCCTCTCCCAGTCCTGCATCCCCCTCCACCCTTTCCCCACCTTCTACCGCACCCTCCTCTCCGACAGCGACAACAATGGCGGCTCGCCTCGCCGCCCCCGCCGCCGCCGCAGCTTCATCGAGATCCTCGACAACGAGCCGACGCTCCACGACCGCTACTACGCCCGCGGCGACGACGTGATGCTACCCGAGGTGCCCTACGACAGCTTCCGCGTCGGCTCGCAGTTCTTCGTGCTCGTGCGCCGCCACGCCGTCATGGTGGTGAGGGATCGGAGGCTGTGGAACAAGTTCAAGCTGCCATGCCTGACCAAGAGGAAGGACTCGTGCTACCCGGAGGAGCACTACTTCCCGACGCTGCTCGACATGCAGGATCCGCAGGGATGCACCAAGTTCACGCTCACCAGGGTCAATTGGACCGACTCCGTCGACGGCCACCCGCACACCTACCGCCCCGACGAGGTCTCCGGCGAGCTCATCAGGGAGCTCAGGAAGTCCAATGGGACTCACTCCTACATGTTCGCGCGCAAATTCGCGCCCGATTGCCTCAAGCCACTGATGGAGATCGCCGACTCCGTCATCCTGCGAGACTAG
Protein Sequence
  • >LOC_Os12g42420.1
    MALPHAASPYVLSLLLLLSIPAVFLLAPRLLPPKTLPSIPDADETDDLALFRRAVLLSAAPDSSSASAGAASLFGRRPQPKVAFLFLTNSDLVFSPLWEKYFAGNHHLLNLYIHADPSAAVDLPATASFRGHVIRGTKATARASATLISAARRLLATALLDDPSNHFFALLSQSCIPLHPFPTFYRTLLSDSDNNGGSPRRPRRRRSFIEILDNEPTLHDRYYARGDDVMLPEVPYDSFRVGSQFFVLVRRHAVMVVRDRRLWNKFKLPCLTKRKDSCYPEEHYFPTLLDMQDPQGCTKFTLTRVNWTDSVDGHPHTYRPDEVSGELIRELRKSNGTHSYMFARKFAPDCLKPLMEIADSVILRD*