Gene Details:
- MSU gene ID: LOC_Os12g39880
- RAPdb gene ID: Os12g0589400
- Gene Symbol: HSA1a
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- Two tightly linked genes at the hsa1 locus cause both F1 and F2 hybrid sterility in rice.
Function-related keywords:
Literature:
- Two Tightly Linked Genes at the hsa1 Locus Cause Both F1 and F2 Hybrid Sterility in Rice . DOI: 10.1016/j.molp.2015.09.014 ; PMID: 26455463
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os12g39880.1
ATCGTGCCGCCGTCCCCTGGGTGGAGGCCGGCAAAACCCTAGATCATCTCACGGTGGCGACATGGAAGCGCATGGATGGATGGTCCTGGACCGCATTGTCCGCTGCTGGAGCGACGACGACGACGTCGTCGGCGGCGACGATGACCCCACGTCGTCGGAGGTCGCCTACACCTGCAGCGGGCACCCCATCCGCGTCTCCCTCCGCGTCGCCGACCCCCCCGCCGTCTCCCGCCTCTACGTCCACCGCCCCGGCTGGCCGCGCGTCTACGACCTGGGCGACGCCGAGGCCATCGCCGCCCACCGCGGATCCATCCTCCTCTCGGCGCGCGTCCCCTTCGCCGACCTCGGCACCGTCGCGCCGGGCCAATTCCCCGTCGACTACTACGTCTACACCGCCGGCGAGGGGCTGCGGCGGCCATCGCTCACGCGGCTGCCCCCTTGCTTCATCGGTGGATTCTCCTCCCCGGAGGTCGACCGCCACTTCAAGCCGCACCGGTGCCAGCAGCAGCGGGTCATGGTAGAGCAGAACGTCGGCTTCTTCTGCCACGGCGCCGGCAATTTCACGGTGGCGGACATCAACATCCATAAGGGTAAGGCCGTCGAGCTCTGCGTCCTCAACCACTATGCTGATTGCCCCCAACAACCCCAATGGAAGGTCCAGATCCTGGAGATGCAGCAGCAACCCAACCAAAACCACCACCTCAGAGGTTGGTGGACCGACGCCGTTCTTCCCCTGCACGACAGCTACCTCGCCTGCGTCGACTGCTACCATGGCATCATCCTCATCGACGTCAAGACCCAGCGTTACTTCAACTACATACCGCTGCCGGCAGAGGCGAAGCATGGCCGCCGCCGCGTTGACAAGTACAGCCCTGATCCAGCTCGTTCTGCCTCCATCAACAGCGCTGGCAATATCACGGTTGTCTGCATAGCCGACGACAATGCCGCAGCAGGAGGCCGCAACAACAACAGCACTGCTGGCTCTGCTTTCATCGAGATCGAGTCATGGTGTCTGGTCGACATCCACGAAAGTAGATGGATTCTTGATTTCACTATGGAAGCCGGCAAGTTCTGGGATATTTGCTCTGCTGCAAACCAGCCCCTCCTTCCACATGCGCCGCCTACTTTCCCCCTGGTGAGCATGGCTAATCCATTTGCCATCTCCTTCCTCCTCTACGACAAGGCCAACAACTTCCTCCTCGAGGACAAGGGCAATGGCCTTTACTGGATGATTGAGGTAGACATGAGAAACCAAATCCTGCTGTCACCAGCCACCCTCTACATCAGTGAAGAAGAAGAAGAGCTCTTCATCAATGGAAAAGAAGAAGAGCAAGAAAGATGTTGTGATGAGAGATACCCGCCCATGAAATATTTTTATGGCCATAACTTCATCCCCAGCTGGTTCCCCTCTTACTTGAAGAAAGGTGGCGACACCACAAGGTTTGCTATGTTTTCTTTTTTATTTGTGATACAAAAACATTTACCATTTGTGTGATGTGTTCAAATATGAAAATAATACCAGTTGGAATATCCATTCAATTGCTTTAGCCACTGTTTAGGAATTAACAAGCAGATAACTGGATAGTTAAATGGCTGAGCAGTTAGCATATTGGAATAGAGCATATCTTTATTAGCTAAATGACTTTGACGATTGGTTTGCTATGTTGTAACATGAGCATATTTGATCGAATGCCCTGCCAATCCTGCAAATAGTGATTCAAGCAATAACTCGGAATTATTCTTCTGTACTCCTCTTCTATACTTGGACATTGCCTCTTAATTAAATTTTCATTACATTCATTTTTCTTTTCGCACAGTTAAACTAGTAGAGCCTTTCATTTGGTGAAAGTTTTACTGATTTGCCAGCACATAACCTTAAGTAATTTGGTTAGCTAAGTTCTTGGTCTAATCAATTACCAACTGTAAACATCATAGCTTGATTTGAAGGAACATCGGGATTGCAGGATCAAAAACTACAGCCTAAACTGTTACTGTTTCTTCTGCTGGAAAGCAAATATAATATTAGGCCTTAAGACAGACAGCCACAGAACAGTGCAGACTTTCTTAACTAGTGTGTCGCATTTGCTTATTTTCTTACCGTCTGTATCTAGTTGCATTGATCGCCTTGTGACTTCTTTTCCATTTCTTGATGCAGTCGGCTGCGGAGTTTAATGATGCAGCAGGCAAAACAAGAGAGTGTAATGCAAAAGATTGGACGGTAATTAAGCACAATGAACAAGCTGTGTCCATGTTTTTTTATCTAGCCTGGAATTAGTTGCATTGCCAGGGTTTTCGGTTTCTTTCGGCCATTTTGGTTTTACCAAAATTCCTGAAATTTCGGTTTTCTGCACTTTTTGGACCCCATTTTTTGAAATTTTAACATAATTTAGCTGATTTTGACCAAATTCGTAAAAAAAAAGAGAGACCGAAAATTTCGACCAGATAATCACTTGCCGAGGGATCCGAAATTTCGAACCGAAATTACAATCAGTGTATATAGCTGTTGTCTGCCCATGCCAACTCCCGCAACATCGGAAGGCGTGACGAGGTGATCATGGCGTAGCTGAACAATCCAGCAAACCTTCGCACCCAACGCCTACTACCACGACAAGACAGACAGAGCGGTCGTCTCCCAGAGAACTTTTATTTTAGTTTTGGGTTTGATTATACAATCGGGTTTTAACCGTATGTAGGTTATGTTCTTGATGGTGGTTTAAGATGTTTAACACTATAGGATGGGTTATAGTTCGATGTTAGAATTATTCCCGTACCTGGACTACTATTGTTTGATGTTGAATTTACAAGTTCAATATGATGTTTTGCACAACTCATTTTAGTTA
CDS Sequence
- >LOC_Os12g39880.1
ATGGAAGCGCATGGATGGATGGTCCTGGACCGCATTGTCCGCTGCTGGAGCGACGACGACGACGTCGTCGGCGGCGACGATGACCCCACGTCGTCGGAGGTCGCCTACACCTGCAGCGGGCACCCCATCCGCGTCTCCCTCCGCGTCGCCGACCCCCCCGCCGTCTCCCGCCTCTACGTCCACCGCCCCGGCTGGCCGCGCGTCTACGACCTGGGCGACGCCGAGGCCATCGCCGCCCACCGCGGATCCATCCTCCTCTCGGCGCGCGTCCCCTTCGCCGACCTCGGCACCGTCGCGCCGGGCCAATTCCCCGTCGACTACTACGTCTACACCGCCGGCGAGGGGCTGCGGCGGCCATCGCTCACGCGGCTGCCCCCTTGCTTCATCGGTGGATTCTCCTCCCCGGAGGTCGACCGCCACTTCAAGCCGCACCGGTGCCAGCAGCAGCGGGTCATGGTAGAGCAGAACGTCGGCTTCTTCTGCCACGGCGCCGGCAATTTCACGGTGGCGGACATCAACATCCATAAGGGTAAGGCCGTCGAGCTCTGCGTCCTCAACCACTATGCTGATTGCCCCCAACAACCCCAATGGAAGGTCCAGATCCTGGAGATGCAGCAGCAACCCAACCAAAACCACCACCTCAGAGGTTGGTGGACCGACGCCGTTCTTCCCCTGCACGACAGCTACCTCGCCTGCGTCGACTGCTACCATGGCATCATCCTCATCGACGTCAAGACCCAGCGTTACTTCAACTACATACCGCTGCCGGCAGAGGCGAAGCATGGCCGCCGCCGCGTTGACAAGTACAGCCCTGATCCAGCTCGTTCTGCCTCCATCAACAGCGCTGGCAATATCACGGTTGTCTGCATAGCCGACGACAATGCCGCAGCAGGAGGCCGCAACAACAACAGCACTGCTGGCTCTGCTTTCATCGAGATCGAGTCATGGTGTCTGGTCGACATCCACGAAAGTAGATGGATTCTTGATTTCACTATGGAAGCCGGCAAGTTCTGGGATATTTGCTCTGCTGCAAACCAGCCCCTCCTTCCACATGCGCCGCCTACTTTCCCCCTGGTGAGCATGGCTAATCCATTTGCCATCTCCTTCCTCCTCTACGACAAGGCCAACAACTTCCTCCTCGAGGACAAGGGCAATGGCCTTTACTGGATGATTGAGGTAGACATGAGAAACCAAATCCTGCTGTCACCAGCCACCCTCTACATCAGTGAAGAAGAAGAAGAGCTCTTCATCAATGGAAAAGAAGAAGAGCAAGAAAGATGTTGTGATGAGAGATACCCGCCCATGAAATATTTTTATGGCCATAACTTCATCCCCAGCTGGTTCCCCTCTTACTTGAAGAAAGGTGGCGACACCACAAGGTTTGCTATGTTTTCTTTTTTATTTGTGATACAAAAACATTTACCATTTGTGTGA
Protein Sequence
- >LOC_Os12g39880.1
MEAHGWMVLDRIVRCWSDDDDVVGGDDDPTSSEVAYTCSGHPIRVSLRVADPPAVSRLYVHRPGWPRVYDLGDAEAIAAHRGSILLSARVPFADLGTVAPGQFPVDYYVYTAGEGLRRPSLTRLPPCFIGGFSSPEVDRHFKPHRCQQQRVMVEQNVGFFCHGAGNFTVADINIHKGKAVELCVLNHYADCPQQPQWKVQILEMQQQPNQNHHLRGWWTDAVLPLHDSYLACVDCYHGIILIDVKTQRYFNYIPLPAEAKHGRRRVDKYSPDPARSASINSAGNITVVCIADDNAAAGGRNNNSTAGSAFIEIESWCLVDIHESRWILDFTMEAGKFWDICSAANQPLLPHAPPTFPLVSMANPFAISFLLYDKANNFLLEDKGNGLYWMIEVDMRNQILLSPATLYISEEEEELFINGKEEEQERCCDERYPPMKYFYGHNFIPSWFPSYLKKGGDTTRFAMFSFLFVIQKHLPFV*