Information report for OsAPT1;APRT
Gene Details
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Functional Descriptions
- Thus the high priority candidate genes for high Fe and Zn in seeds are OsYSL1 and OsMTP1 for iron, OsARD2, OsIRT1, OsNAS1, OsNAS2 for zinc and OsNAS3, OsNRAMP1, Heavy metal ion transport and APRT for both iron and zinc together based on our genetic mapping studies as these genes strictly underlie QTLs.
Literature and News
- Mapping QTLs and candidate genes for iron and zinc concentrations in unpolished rice of Madhukar×Swarna RILs . DOI: 10.1016/j.gene.2012.07.054 ; PMID: 22964359
- Isolation and characterization of IRO2, a novel iron-regulated bHLH transcription factor in graminaceous plants . DOI: 10.1093/jxb/erl054 ; PMID: 16887895
- Expression of iron-acquisition-related genes in iron-deficient rice is co-ordinately induced by partially conserved iron-deficiency-responsive elements . DOI: 10.1093/jxb/eri131 ; PMID: 15781441
- Identification of OsbHLH133 as a regulator of iron distribution between roots and shoots in Oryza sativa . DOI: 10.1111/j.1365-3040.2012.02569.x ; PMID: 22755510
Sequences
cDNA Sequence
- >LOC_Os12g39860.2
GGTTGCTGACCCGCTTTTGCTCCGGCCAATAAAAAGGCGAGGCGAAGCGGAGGAGCGGAAGCAGATGACCTCGCCGCCGCCGCCGCCGTCGTCGTTGCTCCGCCGCCTCCCGACCACGCGCTGCTGCTGCTTTGCCTCCGCGTCGAGCGGCTGGAGCGCGAGTGCGAGCGTGCGGCTCGGATCCCTCGGCGGGAAGCAGCGGCGGGGGCATCGCGGCGTGGCGGTGATGGCGGCGGCGGCGGCAGGGGGAGGAGGCTTCGAGGCGCGCGTGGCGCGGATCGCGTCCACCATCCGCGTCATCCCCGACTTCCCCAAGCCAGGGATTATGTTTCAAGATATCACAACAATGCTTCTCAAGCCAGATGCATTTCGTGACACGATCGAGCTCTTCGTTGAGCGATACAAGGACAAAGGGATCACTGTAATTGCTGGTGTTGAAGCTAGAGGATTCATTTTTGGTCCGCCCATTGCTTTAGCACTAGGTGCAAAATTTGTTCCATTGAGGAAGCCAAAAAAGTTACCTGATAAAATAGAAATGCATGTAGGAGCTGTGGAGCCAAATGGCCGGGCCGTTGTTGTTGATGATCTAATCGCTACAGGTGGAACCTTATCTGCAGCCGTTAAACTTATTGAGCGTGCTGGAGCAGAGGTTGTTGAGTGCGCATGTGTCATTGAACTACCAGAACTGAAGGGTCGGGACAAGCTGGGGAACAAGCCAGTTTTTGTCCTTGTGAAGGCAGACTAAGCGGAATGAAACAACTAAGGGCCTCTCAAGTTGTCCCTATTAATATCAGTGTCCTTCTCGAAGCATGTTGGAAGCAACTAAGATATCGGTCGTGACAATATTAGCTTGTTCTATCCAGTGCTCTGCAATAAAAGTCTCATCTTTAAATTTGTAGGCACATGAGTTATTTGGGAATTCGGACTTGAATGATCCTTGTAATACATCAAAACACGGCATAATTTTTTTTAAAGGAGTGCCAATTATTCATGGGGAATGAGAATCACCTATTTTGGAGTTTGTTGTTCTGCTTGCTATCACTATTGCATTCCTGCTTTCCTGTACAACTTTCACTGACAATTTGTGATCATGGACTTCTGCATTGACTTGTGGAGATCATGATGCTGGCAATTCAAGGTGCCCAGTGGTTTGTGGTACTTCATTTTTTTTGAAACACAA - >LOC_Os12g39860.1
GGTTGCTGACCCGCTTTTGCTCCGGCCAATAAAAAGGCGAGGCGAAGCGGAGGAGCGGAAGCAGATGACCTCGCCGCCGCCGCCGCCGTCGTCGTTGCTCCGCCGCCTCCCGACCACGCGCTGCTGCTGCTTTGCCTCCGCGTCGAGCGGCTGGAGCGCGAGTGCGAGCGTGCGGCTCGGATCCCTCGGCGGGAAGCAGCGGCGGGGGCATCGCGGCGTGGCGGTGATGGCGGCGGCGGCGGCAGGGGGAGGAGGCTTCGAGGCGCGCGTGGCGCGGATCGCGTCCACCATCCGCGTCATCCCCGACTTCCCCAAGCCAGGGATTATGTTTCAAGATATCACAACAATGCTTCTCAAGCCAGATGCATTTCGTGACACGATCGAGCTCTTCGTTGAGCGATACAAGGACAAAGGGATCACTGTAATTGCTGGTGTTGAAGCTAGAGGATTCATTTTTGGTCCGCCCATTGCTTTAGCACTAGGTGCAAAATTTGTTCCATTGAGGAAGCCAAAAAAGTTACCTGATAAAATAGAAATGCATGTAGGAGCTGTGGAGCCAAATGGCCGGGCCGTTGTTGTTGATGATCTAATCGCTACAGGTGGAACCTTATCTGCAGCCGTTAAACTTATTGAGCGTGCTGGAGCAGAGGTTGTTGAGTGCGCATGTGTCATTGAACTACCAGAACTGAAGGGTCGGGACAAGCTGGGGAACAAGCCAGTTTTTGTCCTTGTGAAGGCAGACTAAGCGGAATGAAACAACTAAGGGCCTCTCAAGTTGTCCCTATTAATATCAGTGTCCTTCTCGAAGCATGTTGGAAGCAACTAAGATATCGGTCGTGACAATATTAGCTTGTTCTATCCAGTGCTCTGCAATAAAAGTCTCATCTTTAAATTTGTAGGCACATGAGTTATTTGGGAATTCGGACTTGAATGATCCTTGTAATACATCAAAACACGGCATAATTTTTTTTAAAGGAGTGCCAATTATTCATGGGGAATGAGAATCACCTATTTTGGAGTTTGTTGTTCTGCTTGCTATCACTATTGCATTCCTGCTTTCCTGTACAACTTTCACTGACAATTTGTGATCATGGACTTCTGCATTGACTTGTGGAGATCATGATGCTGGCAATTCAAGGTGCCCAGTGGTTTGTGGTACTTCATTTTTTTTGAAACACAA
CDS Sequence
- >LOC_Os12g39860.2
ATGACCTCGCCGCCGCCGCCGCCGTCGTCGTTGCTCCGCCGCCTCCCGACCACGCGCTGCTGCTGCTTTGCCTCCGCGTCGAGCGGCTGGAGCGCGAGTGCGAGCGTGCGGCTCGGATCCCTCGGCGGGAAGCAGCGGCGGGGGCATCGCGGCGTGGCGGTGATGGCGGCGGCGGCGGCAGGGGGAGGAGGCTTCGAGGCGCGCGTGGCGCGGATCGCGTCCACCATCCGCGTCATCCCCGACTTCCCCAAGCCAGGGATTATGTTTCAAGATATCACAACAATGCTTCTCAAGCCAGATGCATTTCGTGACACGATCGAGCTCTTCGTTGAGCGATACAAGGACAAAGGGATCACTGTAATTGCTGGTGTTGAAGCTAGAGGATTCATTTTTGGTCCGCCCATTGCTTTAGCACTAGGTGCAAAATTTGTTCCATTGAGGAAGCCAAAAAAGTTACCTGATAAAATAGAAATGCATGTAGGAGCTGTGGAGCCAAATGGCCGGGCCGTTGTTGTTGATGATCTAATCGCTACAGGTGGAACCTTATCTGCAGCCGTTAAACTTATTGAGCGTGCTGGAGCAGAGGTTGTTGAGTGCGCATGTGTCATTGAACTACCAGAACTGAAGGGTCGGGACAAGCTGGGGAACAAGCCAGTTTTTGTCCTTGTGAAGGCAGACTAA - >LOC_Os12g39860.1
ATGACCTCGCCGCCGCCGCCGCCGTCGTCGTTGCTCCGCCGCCTCCCGACCACGCGCTGCTGCTGCTTTGCCTCCGCGTCGAGCGGCTGGAGCGCGAGTGCGAGCGTGCGGCTCGGATCCCTCGGCGGGAAGCAGCGGCGGGGGCATCGCGGCGTGGCGGTGATGGCGGCGGCGGCGGCAGGGGGAGGAGGCTTCGAGGCGCGCGTGGCGCGGATCGCGTCCACCATCCGCGTCATCCCCGACTTCCCCAAGCCAGGGATTATGTTTCAAGATATCACAACAATGCTTCTCAAGCCAGATGCATTTCGTGACACGATCGAGCTCTTCGTTGAGCGATACAAGGACAAAGGGATCACTGTAATTGCTGGTGTTGAAGCTAGAGGATTCATTTTTGGTCCGCCCATTGCTTTAGCACTAGGTGCAAAATTTGTTCCATTGAGGAAGCCAAAAAAGTTACCTGATAAAATAGAAATGCATGTAGGAGCTGTGGAGCCAAATGGCCGGGCCGTTGTTGTTGATGATCTAATCGCTACAGGTGGAACCTTATCTGCAGCCGTTAAACTTATTGAGCGTGCTGGAGCAGAGGTTGTTGAGTGCGCATGTGTCATTGAACTACCAGAACTGAAGGGTCGGGACAAGCTGGGGAACAAGCCAGTTTTTGTCCTTGTGAAGGCAGACTAA
Protein Sequence
- >LOC_Os12g39860.2
MTSPPPPPSSLLRRLPTTRCCCFASASSGWSASASVRLGSLGGKQRRGHRGVAVMAAAAAGGGGFEARVARIASTIRVIPDFPKPGIMFQDITTMLLKPDAFRDTIELFVERYKDKGITVIAGVEARGFIFGPPIALALGAKFVPLRKPKKLPDKIEMHVGAVEPNGRAVVVDDLIATGGTLSAAVKLIERAGAEVVECACVIELPELKGRDKLGNKPVFVLVKAD* - >LOC_Os12g39860.1
MTSPPPPPSSLLRRLPTTRCCCFASASSGWSASASVRLGSLGGKQRRGHRGVAVMAAAAAGGGGFEARVARIASTIRVIPDFPKPGIMFQDITTMLLKPDAFRDTIELFVERYKDKGITVIAGVEARGFIFGPPIALALGAKFVPLRKPKKLPDKIEMHVGAVEPNGRAVVVDDLIATGGTLSAAVKLIERAGAEVVECACVIELPELKGRDKLGNKPVFVLVKAD*