Information report for SLG1
Gene Details
|
|
Functional Descriptions
- Dysfunction of SLG1 results in plants with thermosensitive phenotype, while overexpression of SLG1 enhances the tolerance of plants to high temperature.
- SLG1 plays a key role in the response of rice plants to high-temperature stress at both seedling and reproductive stages.
- Natural variations of SLG1 confer high-temperature tolerance in indica rice.
- Our results demonstrate that the allelic differentiation of SLG1 confers indica rice to high-temperature tolerance, and tRNA thiolation pathway might be a potential target in the next generation rice breeding for the warming globe.
Functional Keywords
- temperature , seedling , tolerance , stress , reproductive , breeding
Literature and News
Gene Resources
- UniProt: Q2QMW0
- EMBL: AK069966, AP008218, AP014968
- AlphaFoldDB: Q2QMW0
- EnsemblPlants: Os12t0588900-01
- Gramene: Os12t0588900-01
- KEGG: dosa:Os12g0588900
- InterPro: IPR014729, IPR019407
- PANTHER: PTHR20882, PTHR20882:SF14
- SUPFAM: SSF52402
- Gene3D: 3.40.50.620
- OrthoDB: Q2QMW0
- SWISS-MODEL: Q2QMW0
- eggNOG: KOG2594
Sequences
cDNA Sequence
- >LOC_Os12g39840.1
GCGCTCGCGTGCTTACCCGCCTCGCGTACCCACACCATGGCCGCCGCCGCCGCCTCCTCCTGCGGCGGCGCCGGCTGCGGGCCCCACTGCTCCTCCTCCGCCTCCGCCGCCGCGGTGGAGGATGCTGCTGCTGCGGCGGCGGAGAAGGTAGGCCGCCTGTCACTCTCCCGCGAGTGCGGCAAGTGCGGCGGCGGCGCCGCTGCCGTCGCCGTCGCCGGAGGCCTCGGCCTGTGCGGCGAGTGCTTCCGGGCCAACCTGCTCGGGAAGTTCAAGCTCGCCGTCACGAGCAACGCCATGGTTCGCCCCACCGACTCCGTCCTCCTCGCCTTCTCCGGCGGCCCCGCCTCCAGGGTAGCGCTGCAATTCATACATGAGATGCGGTGCAAGGCGATTGAGAGCTGGGACGTGAGCAATTCACAAGCCTTACCGGTATTCGGTGTCGGGGTGGCATTCGTGGATGAAAGTGTTCTCTGTTCGAAGCCGAGAGACGAGATTGAGATGGCAATTGAAGATATCAGGTCGATCGTGTCGAGTTTGTCAACAGGCGTTAAAGCGATGCACATTGCGCGTCTTGAGGATGTGTTCTCCACCGAATCGGAGGATGGGGAACGCAGGTTGAGGGAGGCGGTGGATATGATTGGTGATGACACTGGGAGGGAGGATTTCCTTCGGTGCTTACGCATGCTTTCGTTGCAAAAGATTGCTATGGAAAACGGGTACGCTAAGATCATGCTAGGATCATGTGCTTCTGCAATAGCATGCCATGTTCTGTCCGCGACTGTGAAGGGGCAAGGTTACTCTTTACCTGCTGATGTCCAGTATGTTGATACACGGTGGGAAATACCTGTTGTTCTCCCACTCCGTGATTGCCTAGCCCAAGAGCTTACTCTCCTCTGTGAACTAGATAGTTTAAAAACACAGCAACATCTCGATAGGCCTTCGAACGGCATCAACAGTTTAGTTGCATCCTTTATTAAACGACTACGGGAAGAGAACCCTTCTCGAGAGCATACCATTGTAAGAACTGCGCAAAAGCTCAAGCCCTTCTCTTTTAACAAATTCTCGGCAGATGGCTATCATGATTTCCTACCATCGCGACTACGTCCAAAATTCCAGAAGTTTGATAGCGATGAGTCCACTTTTTCTGAGATTCTCTGTCTGATGTGTGGAAGTCCGTTCAGTGAATCAGAACTCCAGAATTTGGAAAGCACAAAACACAAGGCTCAGAAGAAAATTGATCTTTATACTGCTCATTGTTGTCAAAGCTGTTATTTCCAGATTCTACCAGCCGGTGAAAACTTGAATGAACATTTCTTTTCACTACTACCAAAATTATGGACTGGAAAAATGGATACCATATCTGACAGCCATAGCTTGCTAAGAGATCAAATAGAAGAGTACCTGCTTGAAGAAAATGATGATGGAAACTGAACTTGATATTTCAGTGAAGCCCGAATATATTTGCCAGAAAGACAGCAGAGATTCCTGCCTAGTTGGGCTCCTCACATTGGCATAATCACATAATCCAAACTTGCTTCAGATAATAGTGTTTCTATCTAGCATGGCATTGGTTTATTCAGAATTCTGCCAGATACTTACAATTTCAACACATTATATCCTTGACTCAATTCCTGATGTTTCTGTATGTCCTTCCTACTCTTAAGAGTTGAAACCTGTATGAAATCCGTATAGTGATAGCCTGATGGGGCAGACCGTCACTTGCCAGCAAGTTTCCACCGATCTCAAGACCACAGACATTGGACAGAAACTTCCATGTGATTACAGTATTCTGATTGGTCACATCTCCTGTACCAACTATTCTGTCTGCAAAAGATTGTAACCTGAAGAATTTATTCGATTATTTTGGAACAATCTTCTCTATACAAGATTTGCACATACTATGGTTTCAATCAAGTACAACGTCCTGTTGGCTCTTCCCATTTATCATGCCTTCAAGGAAACTTTT
CDS Sequence
- >LOC_Os12g39840.1
ATGGCCGCCGCCGCCGCCTCCTCCTGCGGCGGCGCCGGCTGCGGGCCCCACTGCTCCTCCTCCGCCTCCGCCGCCGCGGTGGAGGATGCTGCTGCTGCGGCGGCGGAGAAGGTAGGCCGCCTGTCACTCTCCCGCGAGTGCGGCAAGTGCGGCGGCGGCGCCGCTGCCGTCGCCGTCGCCGGAGGCCTCGGCCTGTGCGGCGAGTGCTTCCGGGCCAACCTGCTCGGGAAGTTCAAGCTCGCCGTCACGAGCAACGCCATGGTTCGCCCCACCGACTCCGTCCTCCTCGCCTTCTCCGGCGGCCCCGCCTCCAGGGTAGCGCTGCAATTCATACATGAGATGCGGTGCAAGGCGATTGAGAGCTGGGACGTGAGCAATTCACAAGCCTTACCGGTATTCGGTGTCGGGGTGGCATTCGTGGATGAAAGTGTTCTCTGTTCGAAGCCGAGAGACGAGATTGAGATGGCAATTGAAGATATCAGGTCGATCGTGTCGAGTTTGTCAACAGGCGTTAAAGCGATGCACATTGCGCGTCTTGAGGATGTGTTCTCCACCGAATCGGAGGATGGGGAACGCAGGTTGAGGGAGGCGGTGGATATGATTGGTGATGACACTGGGAGGGAGGATTTCCTTCGGTGCTTACGCATGCTTTCGTTGCAAAAGATTGCTATGGAAAACGGGTACGCTAAGATCATGCTAGGATCATGTGCTTCTGCAATAGCATGCCATGTTCTGTCCGCGACTGTGAAGGGGCAAGGTTACTCTTTACCTGCTGATGTCCAGTATGTTGATACACGGTGGGAAATACCTGTTGTTCTCCCACTCCGTGATTGCCTAGCCCAAGAGCTTACTCTCCTCTGTGAACTAGATAGTTTAAAAACACAGCAACATCTCGATAGGCCTTCGAACGGCATCAACAGTTTAGTTGCATCCTTTATTAAACGACTACGGGAAGAGAACCCTTCTCGAGAGCATACCATTGTAAGAACTGCGCAAAAGCTCAAGCCCTTCTCTTTTAACAAATTCTCGGCAGATGGCTATCATGATTTCCTACCATCGCGACTACGTCCAAAATTCCAGAAGTTTGATAGCGATGAGTCCACTTTTTCTGAGATTCTCTGTCTGATGTGTGGAAGTCCGTTCAGTGAATCAGAACTCCAGAATTTGGAAAGCACAAAACACAAGGCTCAGAAGAAAATTGATCTTTATACTGCTCATTGTTGTCAAAGCTGTTATTTCCAGATTCTACCAGCCGGTGAAAACTTGAATGAACATTTCTTTTCACTACTACCAAAATTATGGACTGGAAAAATGGATACCATATCTGACAGCCATAGCTTGCTAAGAGATCAAATAGAAGAGTACCTGCTTGAAGAAAATGATGATGGAAACTGA
Protein Sequence
- >LOC_Os12g39840.1
MAAAAASSCGGAGCGPHCSSSASAAAVEDAAAAAAEKVGRLSLSRECGKCGGGAAAVAVAGGLGLCGECFRANLLGKFKLAVTSNAMVRPTDSVLLAFSGGPASRVALQFIHEMRCKAIESWDVSNSQALPVFGVGVAFVDESVLCSKPRDEIEMAIEDIRSIVSSLSTGVKAMHIARLEDVFSTESEDGERRLREAVDMIGDDTGREDFLRCLRMLSLQKIAMENGYAKIMLGSCASAIACHVLSATVKGQGYSLPADVQYVDTRWEIPVVLPLRDCLAQELTLLCELDSLKTQQHLDRPSNGINSLVASFIKRLREENPSREHTIVRTAQKLKPFSFNKFSADGYHDFLPSRLRPKFQKFDSDESTFSEILCLMCGSPFSESELQNLESTKHKAQKKIDLYTAHCCQSCYFQILPAGENLNEHFFSLLPKLWTGKMDTISDSHSLLRDQIEEYLLEENDDGN*