Gene Details:
- MSU gene ID: LOC_Os12g37610
- RAPdb gene ID: Os12g0563200
- Gene Symbol: TCD11
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- The alteration of leaf color in TCD11 mutants was aligned with chlorophyll (Chl) content and chloroplast development.
- The rice TCD11 encoding plastid ribosomal protein S6 is essential for chloroplast development at low temperature.
- In addition, the disruption of TCD11 greatly reduced the transcript levels of certain chloroplasts-associated genes and prevented the assembly of ribosome in chloroplasts at low temperature (20 °C), whereas they recovered to nearly normal levels at high temperature (32 °C).
- Thus, our data indicate that TCD11 plays an important role in chloroplast development at low temperature.
- The map-based cloning and molecular complementation showed that TCD11 encodes the ribosomal small subunit protein S6 in chloroplasts (RPS6).
Function-related keywords:
Literature:
- The rice TCD11 encoding plastid ribosomal protein S6 is essential for chloroplast development at low temperature . DOI: 10.1016/j.plantsci.2017.02.007 ; PMID: 28483049
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os12g37610.1
ATGGAGGCCACCGCCGCGCCGCGGCCGCTGTCCCTCCTCGCGCGGCAGCCGCAGCCGCAGCCGCAGCAGCTGAGGCTGAGGTTGCAGCGGGTCGCCGCGTTCACCGGAGTTGGAGGCGGGGGGCGGCGGCTGATGGTGGCCGCGGCGGCCAAGAAGAGGAGGGGGAAGGGCGGGGAGGGGGAGGAGGAGGAGGAGAGGGTGGACACCCACAGCTTCGCGCCCAAGGCCGGCGAGGCCACCGGGCCGTTCCCCGAGGCCGTCCTGCTCAGGAAGAAAATGGTGAAAGATGATGGTCAAGTTGCACCTGAATTTGCTGATGCAGATGAAGAAAAGCTATATGAGTTTCTTAATATCCAAATGGAGAGTGATTTAAATCTGAAAAGAATGCGGCATTATGAAGTGGTTTACCTAATTCATGAGGATCGTGTGGAAGAAGTTGAAGATGTTGTATCAAAAGTACAAGATTTTGTCAGAGAGAAGAAAGGAAGGATATGGAGGCTTAACAATTGGGGACTGCGTAGACTTGCTTACAAAATAAAGAAAGCAAGACATGCCAACTACATCTTAATGAACTTTGAGATACAGGCAAAATACATCAATGACTTCAAGACCCTGCTAGATAAGGACGAGAGAATCATTAGGCATCTCGTGATGAAACGGGACGAGGCGATCACTGAAGACTGCTCTCCCCCACCAGAGTTCCACACCCTGCGAGCTCAACAACAGTATATGGATGATGAATACATTGATGATGAAGATGATGGCAAAGAGGAGCAGGAGCCGGAGGAGGATTGGGATGACAAGGGTGAAATGGAGAACGCTGGTTATGAAGATGATGATGAACCTGAAATTATTCTTGTTGATGAAGTCGAGCGCGATAACAACGAAAACATTAGAAGAAGGAACAGGACAATGAAAGTAGAGAAGTACGCAGCTGAGAAAGTCTTGAGGTAGCTTAGATGTCTCTGTTTTCATTTAGTCTTAGTGTAAGACTACCCCTTTTTTTCTATACAAAGGACCCACCTGTATGAAAATATGACTACAAAGTAATCTCAGCTGAGTGCATTCCATGTATCAAATGACCACTGTTTTGATGATAA
CDS Sequence
- >LOC_Os12g37610.1
ATGGAGGCCACCGCCGCGCCGCGGCCGCTGTCCCTCCTCGCGCGGCAGCCGCAGCCGCAGCCGCAGCAGCTGAGGCTGAGGTTGCAGCGGGTCGCCGCGTTCACCGGAGTTGGAGGCGGGGGGCGGCGGCTGATGGTGGCCGCGGCGGCCAAGAAGAGGAGGGGGAAGGGCGGGGAGGGGGAGGAGGAGGAGGAGAGGGTGGACACCCACAGCTTCGCGCCCAAGGCCGGCGAGGCCACCGGGCCGTTCCCCGAGGCCGTCCTGCTCAGGAAGAAAATGGTGAAAGATGATGGTCAAGTTGCACCTGAATTTGCTGATGCAGATGAAGAAAAGCTATATGAGTTTCTTAATATCCAAATGGAGAGTGATTTAAATCTGAAAAGAATGCGGCATTATGAAGTGGTTTACCTAATTCATGAGGATCGTGTGGAAGAAGTTGAAGATGTTGTATCAAAAGTACAAGATTTTGTCAGAGAGAAGAAAGGAAGGATATGGAGGCTTAACAATTGGGGACTGCGTAGACTTGCTTACAAAATAAAGAAAGCAAGACATGCCAACTACATCTTAATGAACTTTGAGATACAGGCAAAATACATCAATGACTTCAAGACCCTGCTAGATAAGGACGAGAGAATCATTAGGCATCTCGTGATGAAACGGGACGAGGCGATCACTGAAGACTGCTCTCCCCCACCAGAGTTCCACACCCTGCGAGCTCAACAACAGTATATGGATGATGAATACATTGATGATGAAGATGATGGCAAAGAGGAGCAGGAGCCGGAGGAGGATTGGGATGACAAGGGTGAAATGGAGAACGCTGGTTATGAAGATGATGATGAACCTGAAATTATTCTTGTTGATGAAGTCGAGCGCGATAACAACGAAAACATTAGAAGAAGGAACAGGACAATGAAAGTAGAGAAGTACGCAGCTGAGAAAGTCTTGAGGTAG
Protein Sequence
- >LOC_Os12g37610.1
MEATAAPRPLSLLARQPQPQPQQLRLRLQRVAAFTGVGGGGRRLMVAAAAKKRRGKGGEGEEEEERVDTHSFAPKAGEATGPFPEAVLLRKKMVKDDGQVAPEFADADEEKLYEFLNIQMESDLNLKRMRHYEVVYLIHEDRVEEVEDVVSKVQDFVREKKGRIWRLNNWGLRRLAYKIKKARHANYILMNFEIQAKYINDFKTLLDKDERIIRHLVMKRDEAITEDCSPPPEFHTLRAQQQYMDDEYIDDEDDGKEEQEPEEDWDDKGEMENAGYEDDDEPEIILVDEVERDNNENIRRRNRTMKVEKYAAEKVLR*