Information report for GNP12
Gene Details
|
|
Functional Descriptions
- The results of this study will provide insight into the characteristics and evolution of NB-ARC family and suggest that GNP12 positively regulates panicle development.
- The GNP12 gene encodes RGH1A protein, which regulates rice yield according to panicle length, grain number of panicle, and grain length, with eight major haplotypes.
Functional Keywords
Literature and News
Gene Resources
- UniProt: Q2QNU4
- EMBL: AP014968, DP000011
- AlphaFoldDB: Q2QNU4
- EnsemblPlants: Os12t0553200-01
- Gramene: Os12t0553200-01
- KEGG: dosa:Os12g0553200, osa:4352476
- Orthologous matrix: CKEHEHT
- InterPro: IPR002182, IPR027417, IPR032675
- PANTHER: PTHR23155, PTHR23155:SF1201
- SUPFAM: SSF52047, SSF52540
- Gene3D: 1.10.10.10, 1.10.8.430, 1.20.5.4130
- OrthoDB: Q2QNU4
- SWISS-MODEL: Q2QNU4
- Conserved Domain Database: cd14798
- eggNOG: KOG4658
Sequences
cDNA Sequence
- >LOC_Os12g36720.1
GGGGGCACAGGCGCACAGCTAGTTTTATCATTTCCTCCACTACCATGCGCTGGAGCACTCCGTCTCCCACCCGTTGACCCGAGCGAGCTCCTCTACTCGCCGCCAGCCGCTTCGATAAGACCGGACTCCACCACGGCATCGATCGATCGGGGGCGGCGCGGCCAAGGGGCGGATCGGAGCGGAGCCAGCGGCGACGACGACCGCATCCACTGTCCCGACCCTCCAATTCCGGCATTCAACATCAGATAGGCCAAGATGAACATCGCCACTGGGGCAATGAACACCCTCCTCCCCAAGCTTGGGGAGCTGCTGGTTGGCGAATACAAGCTGCAAAAGGGTGTCAAGGGAGAGATCGAAGAACTTGAGAAAGAGTTGAAAGGTATGACCGCAGCACTCCACAAGGTGGCTGAGACACCTGTGGATCAACTTGACCAGCAGGTCAAGATCTGGGCCAGCGAGGTGAGAGAGCTATCTTACGACATCGAGGATGCCATCGACACCTTCATGTTAAAGTGCAAGGGGCATGAACCTGCCACGAGCTTCAAGAAGGTCACCAATTTGTTCAACAAGTTCAAAACTAACCATCAGATCCACGGTGTCATCAAAGACATCATGGACCAGGTCAAGAAGGTCAGCGAGCGTCGTGACAGGTGCAGAGTCGATGACATCGCTGCCAGGCCAACTGTTGTGGATGTTGATTCTCGCCTAGAAGCTATGTACCGAAAGGCAACAAAACTCATTGGCATTAGCAAGCCAAAAAATGAGCTAACTAAGCAACTCTTGGAATATGACGGCTCATCCAGCCAACAATCAAATATAATTTCTATTGTTGGATTCGGAGGCTTAGGAAAGACAACTCTTGCCAATTCATTATTTCAGGAGCTTAAGGCAAAATTTGACAGCTATTGTTTTGTTTCGGTGTCCTTGAATCCTGATATAAACAAGATTCTCAAGAACATTCTTCTCCAACTTGATGAGAAAATGTATTCCCACATAGATGAAACATGGGAAACGAAGCAGCTCATCGACAAAATTAGAGACTTCCTCAACAATAGAAGGTTCTTGTGCGTGATTGATGATGTATGGAAAAAATCAGCGTGGGATACTATCAAACTTGCTGTGCAAGATGCTAAACTTGGTAGCAAAATAATTGTAACCACGCGAAACAAGGTCATTGCAGAACATGCAGGCGGTGGTGTTTATGAAATGAAACCCTTATCTGATGATGATTCCAGACAATTGTTCTGCAAACGAATATTTGACTCTAACGATGACTGTCCTGCTGATTTGTGTGGTGTCACTGAGAAAATTTTGAAGAAATGTGGTGGTGTACCGCTAGCAATCATCACTACAGCATGCCTACTTGCTAGCAAACCAAGGAATTCAGAGGAATGGGACAAGGTCAATAAGTCTATCAGTTTGGGGCTTGAGAACAACCTTGATGTGGACAACATGCGGAAGATATTAAGCCTCAGTTACAGCGATCTACCTTTTCATTTGAAGACTTGCTTGTTGTCTCTAAGCAAATATACTGAGGATGAGCTAATTAGAAAATATGTTTTGATATGGAGTTGGTTAGCAGAGGGTTTTATTACAGATGAAACACGACCTGCAGGGACAAGCTTGCAGGAGATTGGCGAGAGCTACTTCAACGAGCTCATCAATCGAAGCTTGATCCAGCCAATGAGTGAGAACACTCTTTGGGATGAAGATGGTAAGGTGCATGCATGCAAAGTACATGACATGGTGCTTGAGCTAATAAATCAGCTGTCAGTAGAAGAAGATTTTGTTACAACGTATTTATCTGATGGTCAACAAACAGGTAAACATACATGTACAGCACAAAAGAAGAAGATTCGCCGATTATCTCTCCATAACAGCAATAAGTCCTATGCCTCGCCAGAAGCAAGAGAACAATTGTCCAAAGTAAGGTCGATTACTATCTTCGGCAAGGTCGACTCGATACCACCCTTGTCGAGCTTTCATGTCCTGCGTGTGTTGCAGCTTGAGGACTGCAGTGGAATGGACAAGAACCATCTTAATCATCTCGATAAGCTACTCCTCCTAAGATTTCTGCGTCTAGGGCACTATGGTGCCACTGAGCTCCCTGAAAGCATTGGGAAACTGGAATCTCTCGAAACCTTGGACATAAGAGGTGCACGTAAACCAAGTTCTTTTAAATCTCATAAGGTACTGTTTCCAATGTCTTTTGCCAAACTAAGGAAACTGTTGCGGCTATATGCTGGCAGAGTGAAGCTGGCACAAGGTCTGATGCTGGGGGATATGAAATCTTTACAGGAGCTTGTAATAGAAGCTACCCGAAAGGTAATAAAAGAGATTGGCAATTTGACGGAGCTAAGGACTCTTAGGATCGTTTTCAGTAGTGAAAAAACATTTGAGTTAAAGGAATCCATTCAAACGTCTATACAAAGGTTCACCAATTTGCAAGACCTAGATTTGAGAAATAATAATAGTTTTGAAGAAATCATAGACATGCAACAGGTTCCTTCTGGTCTCCAAAGGTTGTTCATGCACCATTCGTATATGAAAGCATTCCCATGTTGGATCAATTCGTCGATGCTCTCCCGCCTCACCACCTTATCCATTTGGCTGTGTTTTGAATATCTCCAGTCTGACCACCTTGATCGCCTCGCTGAGCTTCCATCTCTTCGCTTTCTCAGGCTACAGTTAGCATTTGTTTCGGAACAACTATAGGAAAAGCTCACTATCCACAGAGGTGCATGTGTATTTCGGAGTTTAAAAGATTTTCACTTTTATAGCCCCATGATGCCATCGTTTCAACCAGGAGCTATGCCCCACCTTGAAAGGCTTTATCTTCGTATTTGGACCAGCCTAAGGAGGGGTGGCTTAAATGATTTAGGTTTGGAGAATCTCCACTCCCTTCGGCATGCAACCATTTATTCAAGCAGCAAGGCTGTTGTTAGAGAGGCACTTAAGGACTATCCTAATCAAGCAGCGCTCGAAATACGATGGTGATGAACTAACTCAGGTGTCTTACTCATCATGTAATTATGGTCGTTCAGTATCACCTGCAATCTATCATCGTAAGCCCAACAAGGGAGCACACGAACAATAGGCGATGCAACAGAGTGGGTGAAATTATCGGCTTATCTATCTATCTATCTATCTACCAGTTGTTTTGGTTGTTTCCATTCCATGAAATTAGAATCGAGTTGTTTAGTTGGCTCTCTATAAAGAGCAGTACTATGTTATTTGGAATTCAAGCAAGAAGATATAAGACCCTGTTAGTTTTCATATTATTCATGGTGGGATTGTTGAAATGGAGTATTTACTCCACGGATTGAAATATATATTCTCCACTGCATTTGTTAGATCACTTGTTTTAAGCTATATGTTATGTTTATATTTTTTAAATATTTAATGTATTATACAAGAGCTCGATGTGCATATCCATGTAAGAAAAAAAGGATAGCTGGTTTGGCTGCTTGAAGCTGC
CDS Sequence
- >LOC_Os12g36720.1
ATGAACATCGCCACTGGGGCAATGAACACCCTCCTCCCCAAGCTTGGGGAGCTGCTGGTTGGCGAATACAAGCTGCAAAAGGGTGTCAAGGGAGAGATCGAAGAACTTGAGAAAGAGTTGAAAGGTATGACCGCAGCACTCCACAAGGTGGCTGAGACACCTGTGGATCAACTTGACCAGCAGGTCAAGATCTGGGCCAGCGAGGTGAGAGAGCTATCTTACGACATCGAGGATGCCATCGACACCTTCATGTTAAAGTGCAAGGGGCATGAACCTGCCACGAGCTTCAAGAAGGTCACCAATTTGTTCAACAAGTTCAAAACTAACCATCAGATCCACGGTGTCATCAAAGACATCATGGACCAGGTCAAGAAGGTCAGCGAGCGTCGTGACAGGTGCAGAGTCGATGACATCGCTGCCAGGCCAACTGTTGTGGATGTTGATTCTCGCCTAGAAGCTATGTACCGAAAGGCAACAAAACTCATTGGCATTAGCAAGCCAAAAAATGAGCTAACTAAGCAACTCTTGGAATATGACGGCTCATCCAGCCAACAATCAAATATAATTTCTATTGTTGGATTCGGAGGCTTAGGAAAGACAACTCTTGCCAATTCATTATTTCAGGAGCTTAAGGCAAAATTTGACAGCTATTGTTTTGTTTCGGTGTCCTTGAATCCTGATATAAACAAGATTCTCAAGAACATTCTTCTCCAACTTGATGAGAAAATGTATTCCCACATAGATGAAACATGGGAAACGAAGCAGCTCATCGACAAAATTAGAGACTTCCTCAACAATAGAAGGTTCTTGTGCGTGATTGATGATGTATGGAAAAAATCAGCGTGGGATACTATCAAACTTGCTGTGCAAGATGCTAAACTTGGTAGCAAAATAATTGTAACCACGCGAAACAAGGTCATTGCAGAACATGCAGGCGGTGGTGTTTATGAAATGAAACCCTTATCTGATGATGATTCCAGACAATTGTTCTGCAAACGAATATTTGACTCTAACGATGACTGTCCTGCTGATTTGTGTGGTGTCACTGAGAAAATTTTGAAGAAATGTGGTGGTGTACCGCTAGCAATCATCACTACAGCATGCCTACTTGCTAGCAAACCAAGGAATTCAGAGGAATGGGACAAGGTCAATAAGTCTATCAGTTTGGGGCTTGAGAACAACCTTGATGTGGACAACATGCGGAAGATATTAAGCCTCAGTTACAGCGATCTACCTTTTCATTTGAAGACTTGCTTGTTGTCTCTAAGCAAATATACTGAGGATGAGCTAATTAGAAAATATGTTTTGATATGGAGTTGGTTAGCAGAGGGTTTTATTACAGATGAAACACGACCTGCAGGGACAAGCTTGCAGGAGATTGGCGAGAGCTACTTCAACGAGCTCATCAATCGAAGCTTGATCCAGCCAATGAGTGAGAACACTCTTTGGGATGAAGATGGTAAGGTGCATGCATGCAAAGTACATGACATGGTGCTTGAGCTAATAAATCAGCTGTCAGTAGAAGAAGATTTTGTTACAACGTATTTATCTGATGGTCAACAAACAGGTAAACATACATGTACAGCACAAAAGAAGAAGATTCGCCGATTATCTCTCCATAACAGCAATAAGTCCTATGCCTCGCCAGAAGCAAGAGAACAATTGTCCAAAGTAAGGTCGATTACTATCTTCGGCAAGGTCGACTCGATACCACCCTTGTCGAGCTTTCATGTCCTGCGTGTGTTGCAGCTTGAGGACTGCAGTGGAATGGACAAGAACCATCTTAATCATCTCGATAAGCTACTCCTCCTAAGATTTCTGCGTCTAGGGCACTATGGTGCCACTGAGCTCCCTGAAAGCATTGGGAAACTGGAATCTCTCGAAACCTTGGACATAAGAGGTGCACGTAAACCAAGTTCTTTTAAATCTCATAAGGTACTGTTTCCAATGTCTTTTGCCAAACTAAGGAAACTGTTGCGGCTATATGCTGGCAGAGTGAAGCTGGCACAAGGTCTGATGCTGGGGGATATGAAATCTTTACAGGAGCTTGTAATAGAAGCTACCCGAAAGGTAATAAAAGAGATTGGCAATTTGACGGAGCTAAGGACTCTTAGGATCGTTTTCAGTAGTGAAAAAACATTTGAGTTAAAGGAATCCATTCAAACGTCTATACAAAGGTTCACCAATTTGCAAGACCTAGATTTGAGAAATAATAATAGTTTTGAAGAAATCATAGACATGCAACAGGTTCCTTCTGGTCTCCAAAGGTTGTTCATGCACCATTCGTATATGAAAGCATTCCCATGTTGGATCAATTCGTCGATGCTCTCCCGCCTCACCACCTTATCCATTTGGCTGTGTTTTGAATATCTCCAGTCTGACCACCTTGATCGCCTCGCTGAGCTTCCATCTCTTCGCTTTCTCAGGCTACAGTTAGCATTTGTTTCGGAACAACTATAG
Protein Sequence
- >LOC_Os12g36720.1
MNIATGAMNTLLPKLGELLVGEYKLQKGVKGEIEELEKELKGMTAALHKVAETPVDQLDQQVKIWASEVRELSYDIEDAIDTFMLKCKGHEPATSFKKVTNLFNKFKTNHQIHGVIKDIMDQVKKVSERRDRCRVDDIAARPTVVDVDSRLEAMYRKATKLIGISKPKNELTKQLLEYDGSSSQQSNIISIVGFGGLGKTTLANSLFQELKAKFDSYCFVSVSLNPDINKILKNILLQLDEKMYSHIDETWETKQLIDKIRDFLNNRRFLCVIDDVWKKSAWDTIKLAVQDAKLGSKIIVTTRNKVIAEHAGGGVYEMKPLSDDDSRQLFCKRIFDSNDDCPADLCGVTEKILKKCGGVPLAIITTACLLASKPRNSEEWDKVNKSISLGLENNLDVDNMRKILSLSYSDLPFHLKTCLLSLSKYTEDELIRKYVLIWSWLAEGFITDETRPAGTSLQEIGESYFNELINRSLIQPMSENTLWDEDGKVHACKVHDMVLELINQLSVEEDFVTTYLSDGQQTGKHTCTAQKKKIRRLSLHNSNKSYASPEAREQLSKVRSITIFGKVDSIPPLSSFHVLRVLQLEDCSGMDKNHLNHLDKLLLLRFLRLGHYGATELPESIGKLESLETLDIRGARKPSSFKSHKVLFPMSFAKLRKLLRLYAGRVKLAQGLMLGDMKSLQELVIEATRKVIKEIGNLTELRTLRIVFSSEKTFELKESIQTSIQRFTNLQDLDLRNNNSFEEIIDMQQVPSGLQRLFMHHSYMKAFPCWINSSMLSRLTTLSIWLCFEYLQSDHLDRLAELPSLRFLRLQLAFVSEQL*