Gene Details:
- MSU gene ID: LOC_Os12g18410
- RAPdb gene ID: Os12g0282000
- Gene Symbol: MIR
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- Growth in the MIR T-DNA knockout rice mutant (MIR) was significantly impaired compared to wild-type (WT) plants when grown under Fe-deficient or -sufficient conditions.
- We cloned and characterized a mitochondrial iron-regulated (MIR) gene in rice involved in Fe homeostasis.
- Rice-specific mitochondrial iron-regulated gene (MIR) plays an important role in iron homeostasis.
- MIR, when expressed in tobacco BY-2 cells, was localized to the mitochondria.
- These results clearly suggest that MIR is a rice-specific mitochondrial protein, recently evolved, and plays a significant role in Fe homeostasis.
- MIR transcripts were greatly increased in response to Fe deficiency in roots and shoot tissue.
- Furthermore, MIR plants accumulated more than twice the amount of Fe in shoot and root tissue compared to WT plants when grown under either Fe-sufficient or -deficient conditions.
- Despite the high accumulation of Fe in roots and shoots, MIR plants triggered the expression of Fe-deficiency-inducible genes, indicating that MIR may not be able to utilize Fe for physiological functions.
Function-related keywords:
- growth , iron , mitochondria , root , homeostasis , shoot
Literature:
- Rice-specific mitochondrial iron-regulated gene (MIR) plays an important role in iron homeostasis . DOI: 10.1093/mp/ssp051 ; PMID: 19825680
Related News:
Gene Resources:
- NCBI ID: AK103636
- UniProt accessions:
Sequences:
cDNA Sequence
- >LOC_Os12g18410.1
ATAGTTGCAAATTACATCTCCTACACCAATTTTTTTTCCTGTATGTTCTTCCGCATGTGCTAGCTAGCTTAGTAGCTTGAGCTCCATCGGTTTTGGTTGAGCTCCTGCTTCAGCTTGCCTCATGCCAGCATGCGCATGGTGCGGTCTGCTGCTCATGTGTTCTCTTCTTTCCAACATTTATCCTACTCGTTGCTCCTTAAGGTACGTACTGGGGCAGCGTGATGCCCGTGACTCAGCACTTAGGCAGTGAAGGGGATGGAGCGCAGGTGCAGTACGAGGCGACGCTGGCGTACTCGGGTGCAGTCGCGGGGGTGACGATCGAGGAACTAGCTGGCCGGACATCGTCATGGTCTTCGGTCTCCTACGTGCTCGACCTGGGGTTCGTCCACCCACACCACGCTGCCCATGCTTGCCTTCTATGGGAGCGGCGAGCGCCATGCCTACCTTGCCCCCTGCAGAACATCATCGCCACAGCCGCACGGCCACACCTACCACCGCACACTCGTGGCCTCTATATATCGCTCACAGCTTCGCTGACAACATCGATCTGCATCTCATGTATGAGTGGATGTGTGCCATGCTGCCATAGCACCAAGGAGGTTTCTGCGACCGCATTTGAGGATTTAAATGAAGCACATTCTAGAAGGCCAGAACAAGGTAAGGTGGGTGAGTTGGGTCACGTCCCAGGATCGGAGGACCAGGGACGCGAAGCGTGAGTGGCAGGGCGCCGACGTCGAGGTCTCCAACAGTACGGTATTGCTCCAATGAGCAGTTGGGACCTTGGGAGCTGGGGTTATTGCCGCGAGGATGGTGCTTCTCTTTGTGTTGACTGTTGACAACGACTAGCCATCGGATTTGGATTCTGGAGGTAGTCTTTAGCATTTTCAAATTTTCCGATTGTACCTAAGTATCTCTATGTAATTGGGAGTGTGCCAACGTCATATACAGTTGAGCACTAAACCTAACTTTACACTTATATACTTTTTGTTCAATTGTTATATGGCATTGTATACAAATGTTTAATTAGGATATATATATATATGGCATTTAGTAGTGATCTTTGCGAGTTAAACGAGTTTTGCTATTTGATTTACACGGTTAATCCTTCCTGTCTTGATGTATGGAGCTGCTGCACAAGAAATGGCATACAGATGTTTCTCTATC - >LOC_Os12g18410.2
ATAGTTGCAAATTACATCTCCTACACCAATTTTTTTTCCTGTATGTTCTTCCGCATGTGCTAGCTAGCTTAGTAGCTTGAGCTCCATCGGTTTTGGTTGAGCTCCTGCTTCAGCTTGCCTCATGCCAGCATGCGCATGGTGCGGTCTGCTGCTCATGTGTTCTCTTCTTTCCAACATTTATCCTACTCGTTGCTCCTTAAGGTACGTACTGGGGCAGCGTGATGCCCGTGACTCAGCACTTAGGCAGTGAAGGGGATGGAGCGCAGGTGCAGTACGAGGCGACGCTGGCGTACTCGGGTGCAGTCGCGGGGGTGACGATCGAGGAACTAGCTGGCCGGACATCGTCATGGTCTTCGGTCTCCTACGTGCTCGACCTGGGGTTCGTCCACCCACACCACGCTGCCCATGCTTGCCTTCTATGGGAGCGGCGAGCGCCATGCCTACCTTGCCCCCTGCAGAACATCATCGCCACAGCCGCACGGCCACACCTACCACCGCACACTCGTGGCCTCTATATATCGCTCACAGCTTCGCTGACAACATCGATCTGCATCTCATGTATGAGTGGATGTGTGCCATGCTGCCATAGCACCAAGGAGGTTTCTGCGACCGCATTTGAGGATTTAAATGAAGCACATTCTAGAAGGCCAGAACAAGGTAAGGTGGGTGAGTTGGGTCACGTCCCAGGATCGGAGGACCAGGGACGCGAAGCGTGAGTGGCAGGGCGCCGACGTCGAGGTCTCCAACAGTACGGTATTGCTCCAATGAGCAGTTGGGACCTTGGGAGCTGGGGTTATTGCCGCGAGGATGGTGCTTCTCTTTGTGTTGACTGTTGACAACGACTAGCCATCGGATTTGGATTCTGGAGGTAGTCTTTAGCATTTTCAAATTTTCCGATTGTACCTAAGTATCTCTATGTAATTGGGAGTGTGCCAACGTCATATACAGTTGAGCACTAAACCTAACTTTACACTTATATACTTTTTGTTCAATTGTTATATGGCATTGTATACAAATGTTTAATTAGGATATATATATATATGGCATTTAGTAGTGATCTTTGCGAGTTAAACGAGTTTTGCTATTTGATTTACACGGTTAATCCTTCCTGTCTTGATGTATGGAGCTGCTGCACAAGAAATGGCATACAGATGTTTCTCTATC
CDS Sequence
- >LOC_Os12g18410.1
ATGCCCGTGACTCAGCACTTAGGCAGTGAAGGGGATGGAGCGCAGGTGCAGTACGAGGCGACGCTGGCGTACTCGGGTGCAGTCGCGGGGGTGACGATCGAGGAACTAGCTGGCCGGACATCGTCATGGTCTTCGGTCTCCTACGTGCTCGACCTGGGGTTCGTCCACCCACACCACGCTGCCCATGCTTGCCTTCTATGGGAGCGGCGAGCGCCATGCCTACCTTGCCCCCTGCAGAACATCATCGCCACAGCCGCACGGCCACACCTACCACCGCACACTCGTGGCCTCTATATATCGCTCACAGCTTCGCTGACAACATCGATCTGCATCTCATGTATGAGTGGATGTGTGCCATGCTGCCATAGCACCAAGGAGGTTTCTGCGACCGCATTTGAGGATTTAAATGAAGCACATTCTAGAAGGCCAGAACAAGGTAAGGTGGGTGAGTTGGGTCACGTCCCAGGATCGGAGGACCAGGGACGCGAAGCGTGA - >LOC_Os12g18410.2
ATGCCCGTGACTCAGCACTTAGGCAGTGAAGGGGATGGAGCGCAGGTGCAGTACGAGGCGACGCTGGCGTACTCGGGTGCAGTCGCGGGGGTGACGATCGAGGAACTAGCTGGCCGGACATCGTCATGGTCTTCGGTCTCCTACGTGCTCGACCTGGGGTTCGTCCACCCACACCACGCTGCCCATGCTTGCCTTCTATGGGAGCGGCGAGCGCCATGCCTACCTTGCCCCCTGCAGAACATCATCGCCACAGCCGCACGGCCACACCTACCACCGCACACTCGTGGCCTCTATATATCGCTCACAGCTTCGCTGACAACATCGATCTGCATCTCATGTATGAGTGGATGTGTGCCATGCTGCCATAGCACCAAGGAGGTTTCTGCGACCGCATTTGAGGATTTAAATGAAGCACATTCTAGAAGGCCAGAACAAGGTAAGGTGGGTGAGTTGGGTCACGTCCCAGGATCGGAGGACCAGGGACGCGAAGCGTGA
Protein Sequence
- >LOC_Os12g18410.1
MPVTQHLGSEGDGAQVQYEATLAYSGAVAGVTIEELAGRTSSWSSVSYVLDLGFVHPHHAAHACLLWERRAPCLPCPLQNIIATAARPHLPPHTRGLYISLTASLTTSICISCMSGCVPCCHSTKEVSATAFEDLNEAHSRRPEQGKVGELGHVPGSEDQGREA* - >LOC_Os12g18410.2
MPVTQHLGSEGDGAQVQYEATLAYSGAVAGVTIEELAGRTSSWSSVSYVLDLGFVHPHHAAHACLLWERRAPCLPCPLQNIIATAARPHLPPHTRGLYISLTASLTTSICISCMSGCVPCCHSTKEVSATAFEDLNEAHSRRPEQGKVGELGHVPGSEDQGREA*