Information report for OGR1
Gene Details
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Functional Descriptions
- This mutation, named opaque and growth retardation 1 (OGR1), was generated by T-DNA insertion into a gene that encodes a pentatricopeptide repeat protein containing the DYW motif.
- We conclude that OGR1 is essential for RNA editing in rice mitochondria and is required for normal growth and development.
- The OGR1-sGFP fusion protein is localized to mitochondria.
- Rice OGR1 encodes a pentatricopeptide repeat-DYW protein and is essential for RNA editing in mitochondria.
Functional Keywords
Literature and News
Gene Resources
- UniProt: B8YEK4
- EMBL: AK242641, AL928779, AP008218
- AlphaFoldDB: B8YEK4
- EnsemblPlants: Os12t0270200-01
- Gramene: Os12t0270200-01
- KEGG: dosa:Os12g0270200
- Orthologous matrix: ASKARWM
- InterPro: IPR002885, IPR011990, IPR032867
- PANTHER: PTHR47926, PTHR47926:SF408
- PROSITE: PS51375
- Gene3D: 1.25.40.10
- OrthoDB: B8YEK4
- SWISS-MODEL: B8YEK4
- eggNOG: KOG4197
Homologs
- Arabidopsis thaliana: AT2G29760, AT3G12770, AT3G11460, AT3G22690, AT3G46790
- Citrullus lanatus: Cla97C09G165370
- Juglans regia: Jr12_20270
- Malus domestica: MDP0000266172, MD17G1217600
- Panicum virgatum: Pavir.3NG108400.1.p
- Rosa chinensis: RchiOBHm_Chr5g0011421
- Saccharum spontaneum: Sspon.02G0050800-1C
- Vitis vinifera: VIT_211s0016g01210
Sequences
cDNA Sequence
- >LOC_Os12g17080.1
GACTATACTAGGTGGGAGTGGCTCTGGTCGCCGCGCCGATTAGGGGTATCCCCCCCCCCCCCCCCCCCCCCCGCGGGCGTCCATGTCGGTGTCGGCGGCGGCGCGGCATCTGGAATCCCTCCTCCCGCGCCTGGCCTCCCTCCGCCACTACCTGCAGTTCCACGCGCGCCTCCTCACCTCGGGCCACCTCGGCGCCCACCCGGGCCTCCGCGCCCGCTTCCTCGACCGCCTCGCGCTCTCGCCGCACCCCGCCGCGCTCCCCCACGCGCTGCTCCTCCTCCGCTCCCTCCCTACCCCGGCCACCAACGACCTCAACGCCGCGCTCAGGGGGCTCGCCGCCTCGCCGCACCCGGCCCGCTCGCTCCTCCTCCTCGCGGGCCGCCTCCTCCCCGCCCTGCTCCCTCGCCCCGACGCGCTCTCGCTCTCCTTCGCGCTCAAGGCGTCCGCCCGCTGCTCCGACGCGCACACCACGGTGCAGCTCCACGCGCTCGTCCTCCGCCTCGGCGTCGCCGCCGACGTCCGGCTGCTAACCACGCTGCTTGACTCGTACGCCAAGTGTGGAGATCTCGCGTCCGCGCGGAAGGTGTTTGATGAAATGACCGTGCGGGACGTGGCCACATGGAACTCGCTGCTGGCGGGGCTAGCGCAAGGCACGGAGCCTAACCTTGCTCTCGCGCTGTTCCACAGGCTGGCTAACAGCTTCCAGGAGTTGCCGTCGAGGGAGGAACCCAATGAGGTGACTATTGTTGCGGCGCTTTCCGCGTGTGCGCAGATTGGCTTGTTAAAAGATGGGATGTATGTGCACGAGTTTGCTAAAAGATTTGGACTGGATCGCAATGTTCGGGTCTGCAATTCACTAATTGACATGTACTCCAAGTGTGGCTCGCTGTCAAGGGCCCTGGATGTGTTCCATTCCATCAAGCCGGAAGACCAGACGCTTGTGTCCTACAATGCTGCAATTCAGGCACATTCCATGCATGGGCATGGGGGTGATGCACTGAGATTGTTTGATGAAATGCCCACACGCATTGAGCCAGATGGAGTGACTTACCTTGCTGTGTTGTGCGGGTGCAACCATTCTGGCCTTGTGGATGATGGGCTCAGGGTATTCAACTCGATGCGAGTTGCTCCAAATATGAAGCACTATGGAACAATTGTGGACCTTCTTGGCCGTGCAGGCCGTCTCACTGAGGCATATGACACCGTCATTTCTATGCCATTTCCAGCTGATATTGTCCTTTGGCAGACATTGTTGGGTGCAGCCAAGATGCATGGGGTTGTTGAGCTTGCGGAGTTGGCTGCCAATAAACTTGCTGAGCTTGGTTCTAATGTCGATGGTGACTATGTGCTCCTATCGAATGTTTATGCATCCAAGGCTCGGTGGATGGATGTTGGTCGAGTACGTGATACCATGCGAAGCAACGATGTGCGAAAAGTTCCTGGCTTCAGCTACACAGAAATAGATGGAGTAATGCATAAGTTTATTAATGGTGACAAAGAGCACCCGAGGTGGCAAGAGATATACAGAGCACTGGAGGACATTGTATCAAGAATTAGTGAGCTAGGATATGAGCCAGAGACAAGCAATGTACTGCATGACATTGGGGAGGAGGAAAAACAGTATGCATTGTGTTATCATAGTGAGAAGCTGGCCATTGCATTTGGGTTGATTGCAACACCACCTGGGGAGACTCTTCGGGTGATCAAAAATCTCCGAATATGTGGGGACTGTCATGTGGTGGCAAAGCTCATCTCTAAAGCTTATGGTCGTGTTATTGTCATTCGGGACAGGGCGAGATTCCATCGATTTGAAGATGGGCAGTGTTCCTGCAGGGATTACTGGTAAATAGTGGCATGCTGGATCATTTAAAGGATAAATTTGGCATGAGCTCGTGGAGATGAGGTCAAAAAGGATGATATAACATGTCTCTGATCCAGCATATCGATTTGTATGGATACTGGAACATATTCTTGAACCATGCATATCACTTCTGACACTTCACACAATGGGTCAAACATCAAAAGGTTGTTCGAGATATAATCCAGGGCTCCAGGCTTGCTGTTGCAGATACATTCAATTTAGTCCCCATTGAAATTAATCTTGTAAGTTAGGGTGTGGGTGGTTTGAAAATCCTCCACTTAGCCTTCACAGAGAATGATCTTGAGAATGAAATACCAAATACAGTATACACGGTTTGAGGTTTCCGGATGGTTTCTGCTGCCACTGGACCTCACAACCCTACAAAGGTTTATAATCACCAAGAGTCCAGGACACAACTGGATAGTCACAATGCCGTAGGTTACAACTAGCATTCAGCTGGTAATGGTATGGTACTAATGAAAAACTGACATCAGGATAGGAGCATGCTATTTTTCCTTTCAGGGAGACAACATAATTTTTCATATCTACGGAGCGAAGTTTTCCTTCAAGTCTTTGGTTCTTTGTCCCGATTCCTTAATATTTGGAAGGCCACGACGCAGGTGAAACTAGCAAAAAAAAAAGATGGACGAGCTCCGGGCCTTGTTTCTTGCCAGACTTTGTCTTCTACACGCGGCAAGAGATACAGGATGTGGACGGAGAAAAAGATGCTGGACGCGCAGACAGGCATGATATCCTACAAAATTGCTGCTCATGCTGCTGATTTGGCAAAGTGCCATCCGTATGCACAAGCATGGGACGATACACTAAGCAAGGCAAGATTTGAGTTTAGATGGTTGGATCAATTTGCTCTGTATCTGGATCCTGTGACCACTATGTCTTTCCATGATGAAACATTACCATCGGAGGGTGCCAAAGTAGCACATTTCTGCTCAATGTGTGGCCCAAAGTCTTGTTCGATGAAAATCACAGAGGATATTAGAAAATATGCTGATGAACATGGTTACAGGATAGTGGAGGAAGCGGTAATACCAGGAATGAATGCTATGAGTGCTGAGTTTTTGGCTGCAAGGAAAACGATCAGTGGGGAGCAACACGGTGAAGCTGGAGGGGAGATCTATGTTCCAGAAAGCTATACAGCTCGCAAATAAGATCATCTTGGCGTCCATCTACTCCGGGTGATAAAGATTTACTGACTGGAGCGTTTATCAGCAGCACTCACCATCCTATGTTAGGGAGGTGGTAAGCAGTTTATGTGCTTTGATAAAGCTGGTGTTGCTTAGCTCAGTTTCTCCTAACCCATCCACTTTTCGAGCTTGTATGCTACTCCTTTTAGTATTGTCAAAATCTTGTTTCGACATGAAGTGAAAAGTTGTGTGAAAAGATCAGTAGGATCTTGTTCGAACCTGTTGGCGATCAGCCTTTGAACCCCAAGGTGTTCGACGAAATACAAAATCAAAAGAGAGCATTTTGCACCGCGT
CDS Sequence
- >LOC_Os12g17080.1
ATGTCGGTGTCGGCGGCGGCGCGGCATCTGGAATCCCTCCTCCCGCGCCTGGCCTCCCTCCGCCACTACCTGCAGTTCCACGCGCGCCTCCTCACCTCGGGCCACCTCGGCGCCCACCCGGGCCTCCGCGCCCGCTTCCTCGACCGCCTCGCGCTCTCGCCGCACCCCGCCGCGCTCCCCCACGCGCTGCTCCTCCTCCGCTCCCTCCCTACCCCGGCCACCAACGACCTCAACGCCGCGCTCAGGGGGCTCGCCGCCTCGCCGCACCCGGCCCGCTCGCTCCTCCTCCTCGCGGGCCGCCTCCTCCCCGCCCTGCTCCCTCGCCCCGACGCGCTCTCGCTCTCCTTCGCGCTCAAGGCGTCCGCCCGCTGCTCCGACGCGCACACCACGGTGCAGCTCCACGCGCTCGTCCTCCGCCTCGGCGTCGCCGCCGACGTCCGGCTGCTAACCACGCTGCTTGACTCGTACGCCAAGTGTGGAGATCTCGCGTCCGCGCGGAAGGTGTTTGATGAAATGACCGTGCGGGACGTGGCCACATGGAACTCGCTGCTGGCGGGGCTAGCGCAAGGCACGGAGCCTAACCTTGCTCTCGCGCTGTTCCACAGGCTGGCTAACAGCTTCCAGGAGTTGCCGTCGAGGGAGGAACCCAATGAGGTGACTATTGTTGCGGCGCTTTCCGCGTGTGCGCAGATTGGCTTGTTAAAAGATGGGATGTATGTGCACGAGTTTGCTAAAAGATTTGGACTGGATCGCAATGTTCGGGTCTGCAATTCACTAATTGACATGTACTCCAAGTGTGGCTCGCTGTCAAGGGCCCTGGATGTGTTCCATTCCATCAAGCCGGAAGACCAGACGCTTGTGTCCTACAATGCTGCAATTCAGGCACATTCCATGCATGGGCATGGGGGTGATGCACTGAGATTGTTTGATGAAATGCCCACACGCATTGAGCCAGATGGAGTGACTTACCTTGCTGTGTTGTGCGGGTGCAACCATTCTGGCCTTGTGGATGATGGGCTCAGGGTATTCAACTCGATGCGAGTTGCTCCAAATATGAAGCACTATGGAACAATTGTGGACCTTCTTGGCCGTGCAGGCCGTCTCACTGAGGCATATGACACCGTCATTTCTATGCCATTTCCAGCTGATATTGTCCTTTGGCAGACATTGTTGGGTGCAGCCAAGATGCATGGGGTTGTTGAGCTTGCGGAGTTGGCTGCCAATAAACTTGCTGAGCTTGGTTCTAATGTCGATGGTGACTATGTGCTCCTATCGAATGTTTATGCATCCAAGGCTCGGTGGATGGATGTTGGTCGAGTACGTGATACCATGCGAAGCAACGATGTGCGAAAAGTTCCTGGCTTCAGCTACACAGAAATAGATGGAGTAATGCATAAGTTTATTAATGGTGACAAAGAGCACCCGAGGTGGCAAGAGATATACAGAGCACTGGAGGACATTGTATCAAGAATTAGTGAGCTAGGATATGAGCCAGAGACAAGCAATGTACTGCATGACATTGGGGAGGAGGAAAAACAGTATGCATTGTGTTATCATAGTGAGAAGCTGGCCATTGCATTTGGGTTGATTGCAACACCACCTGGGGAGACTCTTCGGGTGATCAAAAATCTCCGAATATGTGGGGACTGTCATGTGGTGGCAAAGCTCATCTCTAAAGCTTATGGTCGTGTTATTGTCATTCGGGACAGGGCGAGATTCCATCGATTTGAAGATGGGCAGTGTTCCTGCAGGGATTACTGGTAA
Protein Sequence
- >LOC_Os12g17080.1
MSVSAAARHLESLLPRLASLRHYLQFHARLLTSGHLGAHPGLRARFLDRLALSPHPAALPHALLLLRSLPTPATNDLNAALRGLAASPHPARSLLLLAGRLLPALLPRPDALSLSFALKASARCSDAHTTVQLHALVLRLGVAADVRLLTTLLDSYAKCGDLASARKVFDEMTVRDVATWNSLLAGLAQGTEPNLALALFHRLANSFQELPSREEPNEVTIVAALSACAQIGLLKDGMYVHEFAKRFGLDRNVRVCNSLIDMYSKCGSLSRALDVFHSIKPEDQTLVSYNAAIQAHSMHGHGGDALRLFDEMPTRIEPDGVTYLAVLCGCNHSGLVDDGLRVFNSMRVAPNMKHYGTIVDLLGRAGRLTEAYDTVISMPFPADIVLWQTLLGAAKMHGVVELAELAANKLAELGSNVDGDYVLLSNVYASKARWMDVGRVRDTMRSNDVRKVPGFSYTEIDGVMHKFINGDKEHPRWQEIYRALEDIVSRISELGYEPETSNVLHDIGEEEKQYALCYHSEKLAIAFGLIATPPGETLRVIKNLRICGDCHVVAKLISKAYGRVIVIRDRARFHRFEDGQCSCRDYW*