Gene Details:

Functional Descriptions:

  • This mutation, named opaque and growth retardation 1 (OGR1), was generated by T-DNA insertion into a gene that encodes a pentatricopeptide repeat protein containing the DYW motif.
  • We conclude that OGR1 is essential for RNA editing in rice mitochondria and is required for normal growth and development.
  • The OGR1-sGFP fusion protein is localized to mitochondria.
  • Rice OGR1 encodes a pentatricopeptide repeat-DYW protein and is essential for RNA editing in mitochondria.

Literature:

Gene Resources:

Sequences:

cDNA Sequence
  • >LOC_Os12g17080.1
    GACTATACTAGGTGGGAGTGGCTCTGGTCGCCGCGCCGATTAGGGGTATCCCCCCCCCCCCCCCCCCCCCCCGCGGGCGTCCATGTCGGTGTCGGCGGCGGCGCGGCATCTGGAATCCCTCCTCCCGCGCCTGGCCTCCCTCCGCCACTACCTGCAGTTCCACGCGCGCCTCCTCACCTCGGGCCACCTCGGCGCCCACCCGGGCCTCCGCGCCCGCTTCCTCGACCGCCTCGCGCTCTCGCCGCACCCCGCCGCGCTCCCCCACGCGCTGCTCCTCCTCCGCTCCCTCCCTACCCCGGCCACCAACGACCTCAACGCCGCGCTCAGGGGGCTCGCCGCCTCGCCGCACCCGGCCCGCTCGCTCCTCCTCCTCGCGGGCCGCCTCCTCCCCGCCCTGCTCCCTCGCCCCGACGCGCTCTCGCTCTCCTTCGCGCTCAAGGCGTCCGCCCGCTGCTCCGACGCGCACACCACGGTGCAGCTCCACGCGCTCGTCCTCCGCCTCGGCGTCGCCGCCGACGTCCGGCTGCTAACCACGCTGCTTGACTCGTACGCCAAGTGTGGAGATCTCGCGTCCGCGCGGAAGGTGTTTGATGAAATGACCGTGCGGGACGTGGCCACATGGAACTCGCTGCTGGCGGGGCTAGCGCAAGGCACGGAGCCTAACCTTGCTCTCGCGCTGTTCCACAGGCTGGCTAACAGCTTCCAGGAGTTGCCGTCGAGGGAGGAACCCAATGAGGTGACTATTGTTGCGGCGCTTTCCGCGTGTGCGCAGATTGGCTTGTTAAAAGATGGGATGTATGTGCACGAGTTTGCTAAAAGATTTGGACTGGATCGCAATGTTCGGGTCTGCAATTCACTAATTGACATGTACTCCAAGTGTGGCTCGCTGTCAAGGGCCCTGGATGTGTTCCATTCCATCAAGCCGGAAGACCAGACGCTTGTGTCCTACAATGCTGCAATTCAGGCACATTCCATGCATGGGCATGGGGGTGATGCACTGAGATTGTTTGATGAAATGCCCACACGCATTGAGCCAGATGGAGTGACTTACCTTGCTGTGTTGTGCGGGTGCAACCATTCTGGCCTTGTGGATGATGGGCTCAGGGTATTCAACTCGATGCGAGTTGCTCCAAATATGAAGCACTATGGAACAATTGTGGACCTTCTTGGCCGTGCAGGCCGTCTCACTGAGGCATATGACACCGTCATTTCTATGCCATTTCCAGCTGATATTGTCCTTTGGCAGACATTGTTGGGTGCAGCCAAGATGCATGGGGTTGTTGAGCTTGCGGAGTTGGCTGCCAATAAACTTGCTGAGCTTGGTTCTAATGTCGATGGTGACTATGTGCTCCTATCGAATGTTTATGCATCCAAGGCTCGGTGGATGGATGTTGGTCGAGTACGTGATACCATGCGAAGCAACGATGTGCGAAAAGTTCCTGGCTTCAGCTACACAGAAATAGATGGAGTAATGCATAAGTTTATTAATGGTGACAAAGAGCACCCGAGGTGGCAAGAGATATACAGAGCACTGGAGGACATTGTATCAAGAATTAGTGAGCTAGGATATGAGCCAGAGACAAGCAATGTACTGCATGACATTGGGGAGGAGGAAAAACAGTATGCATTGTGTTATCATAGTGAGAAGCTGGCCATTGCATTTGGGTTGATTGCAACACCACCTGGGGAGACTCTTCGGGTGATCAAAAATCTCCGAATATGTGGGGACTGTCATGTGGTGGCAAAGCTCATCTCTAAAGCTTATGGTCGTGTTATTGTCATTCGGGACAGGGCGAGATTCCATCGATTTGAAGATGGGCAGTGTTCCTGCAGGGATTACTGGTAAATAGTGGCATGCTGGATCATTTAAAGGATAAATTTGGCATGAGCTCGTGGAGATGAGGTCAAAAAGGATGATATAACATGTCTCTGATCCAGCATATCGATTTGTATGGATACTGGAACATATTCTTGAACCATGCATATCACTTCTGACACTTCACACAATGGGTCAAACATCAAAAGGTTGTTCGAGATATAATCCAGGGCTCCAGGCTTGCTGTTGCAGATACATTCAATTTAGTCCCCATTGAAATTAATCTTGTAAGTTAGGGTGTGGGTGGTTTGAAAATCCTCCACTTAGCCTTCACAGAGAATGATCTTGAGAATGAAATACCAAATACAGTATACACGGTTTGAGGTTTCCGGATGGTTTCTGCTGCCACTGGACCTCACAACCCTACAAAGGTTTATAATCACCAAGAGTCCAGGACACAACTGGATAGTCACAATGCCGTAGGTTACAACTAGCATTCAGCTGGTAATGGTATGGTACTAATGAAAAACTGACATCAGGATAGGAGCATGCTATTTTTCCTTTCAGGGAGACAACATAATTTTTCATATCTACGGAGCGAAGTTTTCCTTCAAGTCTTTGGTTCTTTGTCCCGATTCCTTAATATTTGGAAGGCCACGACGCAGGTGAAACTAGCAAAAAAAAAAGATGGACGAGCTCCGGGCCTTGTTTCTTGCCAGACTTTGTCTTCTACACGCGGCAAGAGATACAGGATGTGGACGGAGAAAAAGATGCTGGACGCGCAGACAGGCATGATATCCTACAAAATTGCTGCTCATGCTGCTGATTTGGCAAAGTGCCATCCGTATGCACAAGCATGGGACGATACACTAAGCAAGGCAAGATTTGAGTTTAGATGGTTGGATCAATTTGCTCTGTATCTGGATCCTGTGACCACTATGTCTTTCCATGATGAAACATTACCATCGGAGGGTGCCAAAGTAGCACATTTCTGCTCAATGTGTGGCCCAAAGTCTTGTTCGATGAAAATCACAGAGGATATTAGAAAATATGCTGATGAACATGGTTACAGGATAGTGGAGGAAGCGGTAATACCAGGAATGAATGCTATGAGTGCTGAGTTTTTGGCTGCAAGGAAAACGATCAGTGGGGAGCAACACGGTGAAGCTGGAGGGGAGATCTATGTTCCAGAAAGCTATACAGCTCGCAAATAAGATCATCTTGGCGTCCATCTACTCCGGGTGATAAAGATTTACTGACTGGAGCGTTTATCAGCAGCACTCACCATCCTATGTTAGGGAGGTGGTAAGCAGTTTATGTGCTTTGATAAAGCTGGTGTTGCTTAGCTCAGTTTCTCCTAACCCATCCACTTTTCGAGCTTGTATGCTACTCCTTTTAGTATTGTCAAAATCTTGTTTCGACATGAAGTGAAAAGTTGTGTGAAAAGATCAGTAGGATCTTGTTCGAACCTGTTGGCGATCAGCCTTTGAACCCCAAGGTGTTCGACGAAATACAAAATCAAAAGAGAGCATTTTGCACCGCGT
CDS Sequence
  • >LOC_Os12g17080.1
    ATGTCGGTGTCGGCGGCGGCGCGGCATCTGGAATCCCTCCTCCCGCGCCTGGCCTCCCTCCGCCACTACCTGCAGTTCCACGCGCGCCTCCTCACCTCGGGCCACCTCGGCGCCCACCCGGGCCTCCGCGCCCGCTTCCTCGACCGCCTCGCGCTCTCGCCGCACCCCGCCGCGCTCCCCCACGCGCTGCTCCTCCTCCGCTCCCTCCCTACCCCGGCCACCAACGACCTCAACGCCGCGCTCAGGGGGCTCGCCGCCTCGCCGCACCCGGCCCGCTCGCTCCTCCTCCTCGCGGGCCGCCTCCTCCCCGCCCTGCTCCCTCGCCCCGACGCGCTCTCGCTCTCCTTCGCGCTCAAGGCGTCCGCCCGCTGCTCCGACGCGCACACCACGGTGCAGCTCCACGCGCTCGTCCTCCGCCTCGGCGTCGCCGCCGACGTCCGGCTGCTAACCACGCTGCTTGACTCGTACGCCAAGTGTGGAGATCTCGCGTCCGCGCGGAAGGTGTTTGATGAAATGACCGTGCGGGACGTGGCCACATGGAACTCGCTGCTGGCGGGGCTAGCGCAAGGCACGGAGCCTAACCTTGCTCTCGCGCTGTTCCACAGGCTGGCTAACAGCTTCCAGGAGTTGCCGTCGAGGGAGGAACCCAATGAGGTGACTATTGTTGCGGCGCTTTCCGCGTGTGCGCAGATTGGCTTGTTAAAAGATGGGATGTATGTGCACGAGTTTGCTAAAAGATTTGGACTGGATCGCAATGTTCGGGTCTGCAATTCACTAATTGACATGTACTCCAAGTGTGGCTCGCTGTCAAGGGCCCTGGATGTGTTCCATTCCATCAAGCCGGAAGACCAGACGCTTGTGTCCTACAATGCTGCAATTCAGGCACATTCCATGCATGGGCATGGGGGTGATGCACTGAGATTGTTTGATGAAATGCCCACACGCATTGAGCCAGATGGAGTGACTTACCTTGCTGTGTTGTGCGGGTGCAACCATTCTGGCCTTGTGGATGATGGGCTCAGGGTATTCAACTCGATGCGAGTTGCTCCAAATATGAAGCACTATGGAACAATTGTGGACCTTCTTGGCCGTGCAGGCCGTCTCACTGAGGCATATGACACCGTCATTTCTATGCCATTTCCAGCTGATATTGTCCTTTGGCAGACATTGTTGGGTGCAGCCAAGATGCATGGGGTTGTTGAGCTTGCGGAGTTGGCTGCCAATAAACTTGCTGAGCTTGGTTCTAATGTCGATGGTGACTATGTGCTCCTATCGAATGTTTATGCATCCAAGGCTCGGTGGATGGATGTTGGTCGAGTACGTGATACCATGCGAAGCAACGATGTGCGAAAAGTTCCTGGCTTCAGCTACACAGAAATAGATGGAGTAATGCATAAGTTTATTAATGGTGACAAAGAGCACCCGAGGTGGCAAGAGATATACAGAGCACTGGAGGACATTGTATCAAGAATTAGTGAGCTAGGATATGAGCCAGAGACAAGCAATGTACTGCATGACATTGGGGAGGAGGAAAAACAGTATGCATTGTGTTATCATAGTGAGAAGCTGGCCATTGCATTTGGGTTGATTGCAACACCACCTGGGGAGACTCTTCGGGTGATCAAAAATCTCCGAATATGTGGGGACTGTCATGTGGTGGCAAAGCTCATCTCTAAAGCTTATGGTCGTGTTATTGTCATTCGGGACAGGGCGAGATTCCATCGATTTGAAGATGGGCAGTGTTCCTGCAGGGATTACTGGTAA
Protein Sequence
  • >LOC_Os12g17080.1
    MSVSAAARHLESLLPRLASLRHYLQFHARLLTSGHLGAHPGLRARFLDRLALSPHPAALPHALLLLRSLPTPATNDLNAALRGLAASPHPARSLLLLAGRLLPALLPRPDALSLSFALKASARCSDAHTTVQLHALVLRLGVAADVRLLTTLLDSYAKCGDLASARKVFDEMTVRDVATWNSLLAGLAQGTEPNLALALFHRLANSFQELPSREEPNEVTIVAALSACAQIGLLKDGMYVHEFAKRFGLDRNVRVCNSLIDMYSKCGSLSRALDVFHSIKPEDQTLVSYNAAIQAHSMHGHGGDALRLFDEMPTRIEPDGVTYLAVLCGCNHSGLVDDGLRVFNSMRVAPNMKHYGTIVDLLGRAGRLTEAYDTVISMPFPADIVLWQTLLGAAKMHGVVELAELAANKLAELGSNVDGDYVLLSNVYASKARWMDVGRVRDTMRSNDVRKVPGFSYTEIDGVMHKFINGDKEHPRWQEIYRALEDIVSRISELGYEPETSNVLHDIGEEEKQYALCYHSEKLAIAFGLIATPPGETLRVIKNLRICGDCHVVAKLISKAYGRVIVIRDRARFHRFEDGQCSCRDYW*