Information report for PGL12
Gene Details
|
|
Functional Descriptions
- We also showed that the transcript levels of several nuclear- and plastid-encoded genes associated with chloroplast development and photosynthesis were significantly altered in PGL12 mutants.
- Our results indicate that PGL12 is a new PLS-type PPR protein required for proper chloroplast development and 16S rRNA processing in rice.
- The PGL12 mutant had significantly reduced chlorophyll contents and increased sensitivity to changes in temperature.
- In this study, we identified and characterized a rice mutant, pale-green leaf12 (PGL12); at the seedling stage, PGL12 mutants had yellow-green leaves, which gradually turned pale green as the plants grew.
- Map-based cloning of PGL12, including a transgenic complementation test, confirmed the presence of a base substitution (C to T), generating a stop codon, within LOC_Os12g10184 in the PGL12 mutant.
Functional Keywords
Literature and News
Sequences
cDNA Sequence
- >LOC_Os12g10184.1
ATGGCGATGGCGTCCTCCTCCCTCGCCGCCGCAAACCACCCCCTCCTCCCCTCCAAGCCGCTCTCCTGCCCCAAGCCCCTCACCCGCGCGACGCCCCTCTCCCGCGCGCTCCACGCCGGCGCCGCCGCGGCCGCGCGGGGCGCTTCGTCGTCGCAGGCGGAGCTCCGGCCGGACTCCAAGAACGCGCCCGCGCTGTCCGCGGAGCTCCGGAGGCTGGCGCGCGTCGGGAGGCTCCCCTCCGCGCTCGCCCTCCTCGACCACCTCTCCCACCGCGGTGTCCCCGCCACGGCCTCGGCCTTCGCCGCGCTGCTCACCGCGTGCCGGTCGCTCGCCCACGCGCGCCAGGTCCACGCGCACCTCCGCGTCCACGGCCTCGACTCCAACGAGTTCCTGCTCGCCAGGCTCGTCGAGCTCTACCTCGCGCTCGGCGCCCGGGAGGACGCGCGCAAGGTGCTCGACGGGTTGCCCCGGGCGAGCTCCTTCTCGTGGAACGCGCTCCTCCACGGGCACGTGCGCCGGGGACGCGGCCAGGCGGGCGCCGCCGTCGTGGATGGGTTCGCAGAGATGCGCGCCGCGGGCGCCGACGCCAACGAGTACACGTATGGCTGCGTCCTCAAGTCCATCTCCGGGAGCGCCGCGCCGTCCATGGCCATGGCCACCGCCACGCACGCGATGCTGATCAAGAACGCCTACGCGGGCGCTCCCAGGATGCTCATGACGGGGCTCATGGACGTGTACTTCAAGTGCGGGAAGGTGAAGCCTGCGGTTATGGTGTTCGAGGAAATGCCAGAGAGGGATGTGGTTGCGTGGGGTGCAGTGATTGCCGGGTTTGCGCATAAGGGGATGAAGAGGGAGGCGCTGGAGCATTTCCGGTGGATGGTGGAGGATGGGATCAAGGTGAACTCTGTGGTGCTTACGTCAGTTGTGCCTGTCATCGGCGAGTTGCGTGCCTGGAACTTGGGTAGGGAGATCCATGGTTTTGTGCTGAAGAAGTTCCAACATCGTAAGGATGTTGGAAACATTCAGGCAGGGTTGGTAGATATGTACTGCAAGTGTGGCGATATGGTCTCTGGGAGACGGGTGTTCTATAGCGCTAAGAAGAGGAATGTTGTCTCATGGACGGCACTGATGTCTGGCTATGCATCCAATGGCAGGCCTGACCAGGCGCTGAGGTGCATACTTTGGATGCAACAAGAAGGAATCAGACCGGATCTTATAGCCGTGGGGACTGTGCTCCCAGTATGTACGAAGTTGAAAGCATTGAGGGAAGGGAAAGAGCTTCACGCATATGCCTTGCGGAGGTGGTTCCTGCCAAATATTTCCTTGTGCACTTCACTGATCACTATGTATGGTACGTGCAGTCACTCGGATTACTCTCAACGGGTGTTCCATGTCATGGACAAGAAGACTGTACAAGCTTGGACAGCATTGGTCGATGCGTACCTAAAGAATGGTGATCCTTCAACTGCTGTTGATGTGTTCAGATCAATGCTGCTCTCAAACCGCCGGCCTGATGCTGTTGCAATCAGCAGGATGTTGAGTGCCTGCCGTGACATTGGGGCATCAAAACTTGGCAAGGAATTGCATGGTCAAGCGTTAAAGTTGCGGATGGAACCTCTCCCCCTAGTTGCAGCAGGGCTAGTTAGCATGTATGGCACATGTGGAGACCTCAAGGCAGCGCAACGGGTTTTCAACCGGATTGAGTCCAAGGGATCCCTTACTTGCACTGCCATAATAGAAGCTTACGCAATCAACCAGAGACACAAGGAGGCACTGGAACTCTTTGCTTGGATGCTGTCAAACAGGTTTGTTCCAAATAATGGCACCTTTGATGTGTTGCTGAGAATCTGTGAAGCGGCAGGGTTGCATGATGAAGCTCTTCAGATTTTCAACTCCATGGTGCAAGAATACAATCTGGAAGCGTCTGAACATAATTTTGACTGCATTATACGGCTTCTCACTGCTGCAGACAGGACTTCTGAAGCACATCGGTTTGCTGATCTGAAAGCTACTCTGTTTAATTTATCAACTCCCTCTTTGAATTGCTAACAGCAGTAAATCTGTATATAACGCCACATTTGATTTGTTGAAATGACTGATACTCCTTTTCTATTGTCTGAAAAGGTAAGCTTGGTATTCGTTTTTCAAGAAAAGATTAAATATCAATGGCATGCTAAAGTTAGTTA
CDS Sequence
- >LOC_Os12g10184.1
ATGGCGATGGCGTCCTCCTCCCTCGCCGCCGCAAACCACCCCCTCCTCCCCTCCAAGCCGCTCTCCTGCCCCAAGCCCCTCACCCGCGCGACGCCCCTCTCCCGCGCGCTCCACGCCGGCGCCGCCGCGGCCGCGCGGGGCGCTTCGTCGTCGCAGGCGGAGCTCCGGCCGGACTCCAAGAACGCGCCCGCGCTGTCCGCGGAGCTCCGGAGGCTGGCGCGCGTCGGGAGGCTCCCCTCCGCGCTCGCCCTCCTCGACCACCTCTCCCACCGCGGTGTCCCCGCCACGGCCTCGGCCTTCGCCGCGCTGCTCACCGCGTGCCGGTCGCTCGCCCACGCGCGCCAGGTCCACGCGCACCTCCGCGTCCACGGCCTCGACTCCAACGAGTTCCTGCTCGCCAGGCTCGTCGAGCTCTACCTCGCGCTCGGCGCCCGGGAGGACGCGCGCAAGGTGCTCGACGGGTTGCCCCGGGCGAGCTCCTTCTCGTGGAACGCGCTCCTCCACGGGCACGTGCGCCGGGGACGCGGCCAGGCGGGCGCCGCCGTCGTGGATGGGTTCGCAGAGATGCGCGCCGCGGGCGCCGACGCCAACGAGTACACGTATGGCTGCGTCCTCAAGTCCATCTCCGGGAGCGCCGCGCCGTCCATGGCCATGGCCACCGCCACGCACGCGATGCTGATCAAGAACGCCTACGCGGGCGCTCCCAGGATGCTCATGACGGGGCTCATGGACGTGTACTTCAAGTGCGGGAAGGTGAAGCCTGCGGTTATGGTGTTCGAGGAAATGCCAGAGAGGGATGTGGTTGCGTGGGGTGCAGTGATTGCCGGGTTTGCGCATAAGGGGATGAAGAGGGAGGCGCTGGAGCATTTCCGGTGGATGGTGGAGGATGGGATCAAGGTGAACTCTGTGGTGCTTACGTCAGTTGTGCCTGTCATCGGCGAGTTGCGTGCCTGGAACTTGGGTAGGGAGATCCATGGTTTTGTGCTGAAGAAGTTCCAACATCGTAAGGATGTTGGAAACATTCAGGCAGGGTTGGTAGATATGTACTGCAAGTGTGGCGATATGGTCTCTGGGAGACGGGTGTTCTATAGCGCTAAGAAGAGGAATGTTGTCTCATGGACGGCACTGATGTCTGGCTATGCATCCAATGGCAGGCCTGACCAGGCGCTGAGGTGCATACTTTGGATGCAACAAGAAGGAATCAGACCGGATCTTATAGCCGTGGGGACTGTGCTCCCAGTATGTACGAAGTTGAAAGCATTGAGGGAAGGGAAAGAGCTTCACGCATATGCCTTGCGGAGGTGGTTCCTGCCAAATATTTCCTTGTGCACTTCACTGATCACTATGTATGGTACGTGCAGTCACTCGGATTACTCTCAACGGGTGTTCCATGTCATGGACAAGAAGACTGTACAAGCTTGGACAGCATTGGTCGATGCGTACCTAAAGAATGGTGATCCTTCAACTGCTGTTGATGTGTTCAGATCAATGCTGCTCTCAAACCGCCGGCCTGATGCTGTTGCAATCAGCAGGATGTTGAGTGCCTGCCGTGACATTGGGGCATCAAAACTTGGCAAGGAATTGCATGGTCAAGCGTTAAAGTTGCGGATGGAACCTCTCCCCCTAGTTGCAGCAGGGCTAGTTAGCATGTATGGCACATGTGGAGACCTCAAGGCAGCGCAACGGGTTTTCAACCGGATTGAGTCCAAGGGATCCCTTACTTGCACTGCCATAATAGAAGCTTACGCAATCAACCAGAGACACAAGGAGGCACTGGAACTCTTTGCTTGGATGCTGTCAAACAGGTTTGTTCCAAATAATGGCACCTTTGATGTGTTGCTGAGAATCTGTGAAGCGGCAGGGTTGCATGATGAAGCTCTTCAGATTTTCAACTCCATGGTGCAAGAATACAATCTGGAAGCGTCTGAACATAATTTTGACTGCATTATACGGCTTCTCACTGCTGCAGACAGGACTTCTGAAGCACATCGGTTTGCTGATCTGAAAGCTACTCTGTTTAATTTATCAACTCCCTCTTTGAATTGCTAA
Protein Sequence
- >LOC_Os12g10184.1
MAMASSSLAAANHPLLPSKPLSCPKPLTRATPLSRALHAGAAAAARGASSSQAELRPDSKNAPALSAELRRLARVGRLPSALALLDHLSHRGVPATASAFAALLTACRSLAHARQVHAHLRVHGLDSNEFLLARLVELYLALGAREDARKVLDGLPRASSFSWNALLHGHVRRGRGQAGAAVVDGFAEMRAAGADANEYTYGCVLKSISGSAAPSMAMATATHAMLIKNAYAGAPRMLMTGLMDVYFKCGKVKPAVMVFEEMPERDVVAWGAVIAGFAHKGMKREALEHFRWMVEDGIKVNSVVLTSVVPVIGELRAWNLGREIHGFVLKKFQHRKDVGNIQAGLVDMYCKCGDMVSGRRVFYSAKKRNVVSWTALMSGYASNGRPDQALRCILWMQQEGIRPDLIAVGTVLPVCTKLKALREGKELHAYALRRWFLPNISLCTSLITMYGTCSHSDYSQRVFHVMDKKTVQAWTALVDAYLKNGDPSTAVDVFRSMLLSNRRPDAVAISRMLSACRDIGASKLGKELHGQALKLRMEPLPLVAAGLVSMYGTCGDLKAAQRVFNRIESKGSLTCTAIIEAYAINQRHKEALELFAWMLSNRFVPNNGTFDVLLRICEAAGLHDEALQIFNSMVQEYNLEASEHNFDCIIRLLTAADRTSEAHRFADLKATLFNLSTPSLNC*