Information report for OsPGL1
Gene Details
|
|
Functional Descriptions
- The loss of function of OsPGL1 resulted in defects in both chloroplast RNA editing of ndhD-878 and mitochondrial RNA editing of ccmFc-543, both of which could be restored via complementary validation.
- Despite synonymous editing of ccmFc-543, the loss of editing of ndhD-878 caused a failed conversion of serine to leucine, leading to chloroplast dysfunction and defects in the photosynthetic complex; the results of additional experiments demonstrated that OsPGL1 directly binds to both transcripts.
- Here, we identified a rice dual-localized PPR protein, OsPGL1.
- Map-based cloning of this gene revealed that OsPGL1 encodes a chloroplast targeted protein homologous to the 54-kDa subunit of the signal recognition particle (cpSRP54).
Functional Keywords
Literature and News
- A rice dual-localized pentatricopeptide repeat protein is involved in organellar RNA editing together with OsMORFs . DOI: 10.1093/jxb/ery108 ; PMID: 29562289
- PALE-GREEN LEAF 1, a rice cpSRP54 protein, is essential for the assembly of the PSI-LHCI supercomplex . DOI: 10.1002/pld3.436 ; PMID: 35949951
Gene Resources
- UniProt: Q2QXB0
- EMBL: AK067553, AP014968, DP000011
- AlphaFoldDB: Q2QXB0
- EnsemblPlants: Os12t0163600-01
- Gramene: Os12t0163600-01
- KEGG: osa:4351584
- Orthologous matrix: HLINCYV
- InterPro: IPR002885, IPR011990, IPR032867
- PANTHER: PTHR47926, PTHR47926:SF368
- PROSITE: PS51375
- Gene3D: 1.25.40.10
- OrthoDB: Q2QXB0
- SWISS-MODEL: Q2QXB0
- eggNOG: KOG4197
Sequences
cDNA Sequence
- >LOC_Os12g06650.1
GAAATGAAACGATCTGGTTGCCTTCTCCGGTTCTCCCCAAGCAAACACGGACTAGGGCCTGCGCCGCGGCGGCGGCGGCGGCGGCGCTGCTTTTCCCCGGCGCGCCCCGTCCCCGGCAGCGGCTCCTCCGGCGTGGTACCTCCCAAGCGCTTCCGATCCTCGACATGACACTGGCACCAACCGGTCTCCATGACGGCGACATCCAACGCCGCCGCCGGCGCGGCCACGCTGATGCCGCTGCTGATCCACCTCCTTCGCGGCGCCTCCGACCTCGCCTCCGTGTCCGCCACCCACGCCAAGCTCCTCAAGCTCGGGGCGGCCTCCTCGGTCGCCTCCTCCAACCACCTCCTCGCGGCGTACGGCCGCTGCGGCTGCACCGCCCTCGCGCGCCACCTGTTCGACGGAATGCGCGACCGGAACGTCGTCTCCTGGACGGCCCTCATGTCCGGGTACGCCAGCGCCGGCCGGCCCCGGGCGGCCGTCGCCCTCCTCCGCGCCATGGCACGCAGCGGCGTGCCACCCAACGCCTTCACCTTCTCTACAGCTGCCAGCTCGTGCGCGCGCCTGGCTGACGCCGGCCTTGGGCGGCAGGTGCATGCCCGCGCTGAGGTCGCGGGGTACGCGTGCGACAGCGTCGTTTCCACTGCGCTCGTCGACATGTACGGCAAGGCCGGCAGGGTCGGGGACGCCCGCGCTGTGTTCGACGCAATGCCCGTGACGGCGAGAAACGCGGTTTCCTGGGCCTCGATGCTGTCGGTGTATGCGCAGAACGCGCTCGGGCATGACGCTATCCAGCTCTTCGCCGAGCTCAGAACCAATGGCGAAGACATGGCGCCCAACCACTTCATGCTGTCAAGCGTGGTGAACGCGTGCGCGGGCGTCGGGCGGCTTGGCATCGGCAAGTGCATTCACGGCATGGTCCTCCACCATGGGCACGAAGACAATGACGTGGTTGCAGTGGCTCTGGTTGACATGTACTCCAAATGTGGCATCTACGAGTACTCAAAGAAGGTGTTCGACAGGATCAACCAGCCGTCGGTCATCCCCTACACCTCCATCATCGTGGCGACGGCGAAGTACGGCCTCGGCAGGTGCGCACTCGCTTTGTTCAGTGACATGGTTGGCCGAGGCGTGCAGCCAAACAGTGTCACACTGCTCGGCGTCCTGCACGCTTGCAGCCACTCAGGTCTGGTCGACACCGGCCTCCAGCTCCTCCGTTCAATGCGAAGCGAGTACGGCATTGATCCATGTGCCAGCCACTACACTTGTGCTGTCGACATGCTCGGTCGTGCAGGTCAGCTCGAGGCGGCATTCGAGCTGGCCGACGAAGCACAGGTCAATGGCAATGACGCCCTCATGCTGTGGAGCTCATTGCTGTCAGCTTGCCGGAACCACAAGCGCCTGGACCTAGCAACCATGGCTGGGCAGAAGGTATCAGAGTTCACCCAAGATGTGGCCGGCGCACTGGTGGTCATGTCGAACGCATACGCTTCAGCCGGTCAAGCCGACGACGCTGCTGCGGTGTGGTCGAACATGAGGCGGCGCGGCATTCGGAAGGATCCCGGGTGCAGCTGGATCGAGATAAAGGACATCTCCTACGTGTTCTACGCTGGCATGGTATCGCCTGCCGGCTCAAGGGCCGGTGAGGTGATGCTGCTGTTAGATGAATTGGAGGGCAAGATGAGGGAGAAGGGTTACAAGGGGAGAATTGGCAGTGCCAGAGTCCTTGATGCTGATGAAGAAGAGGATGGAAATCATCATCATCAGGAAGGCAGAGGTGTGATGGTTGGAGTGCACAGTGAGTTGCTGGCATTGGGGCTTGGATTGCTGGTGATCCCCAAGGGGATGGCCATTAGGGTGATGAAGAACCTGAGGATGTGCCGTGACTGCCATGAAGCGTTTAAGGTCATCAGTGCCATTGTGGAGAGGGAGTTCGTTGTCAGGGATCTCAACAGGTTCCACCACTTCAGGATGGGGTCATGTTCTTGCAATGACTACTGGTGATTCAATCAAAGGCTAGAATCAGTTACTCCCATCTTGCAATGATTACTGGTGATTCAATCAAAGGCTAGAATCAGTTACTCCCACAGTCCTAAAATATAAGAACCTAAAACCGGATGTGACATTTCCTAGTATAATGAATCTTAAGAGGCACTAAAAAATGTCTCATTCAATTCTAGGTTCTTCTATTTTGGGACGGATGGAGTAGTAGGAAGAAACCAGGTCATGTTCTTGCAATGACTACTGGTGATGCAATCAAAGGCTAAATCGGTTGGTAGTTGTGATCTTTTTGACATAAAAGGAAGACAGCCTTGACAGAATTTCTTTGTGTAGATGCAGAACTGAAGTGACTTCTTTCGTTGCGAGCCTGTAGGTAGGTACCAAAGGTCCACAGCATTGCTTGAAAATATAGACACAAACGAACATGGCCTGGGGTTGGAGTTGGCCCCAACTTTGTTGAAACTGGGTTTGTTTTATGATATGTCTTTGTGCTCTAGTAATAAATATTTGATATTTATGATAAAGTTTGATCAAACTCTTAAATTTTGATTATCAATAATTTCTCAAGTGATAGTTTTTAATAACATGTACATAGAGTACTATCATAAATATCATAAACTTATTT
CDS Sequence
- >LOC_Os12g06650.1
ATGACGGCGACATCCAACGCCGCCGCCGGCGCGGCCACGCTGATGCCGCTGCTGATCCACCTCCTTCGCGGCGCCTCCGACCTCGCCTCCGTGTCCGCCACCCACGCCAAGCTCCTCAAGCTCGGGGCGGCCTCCTCGGTCGCCTCCTCCAACCACCTCCTCGCGGCGTACGGCCGCTGCGGCTGCACCGCCCTCGCGCGCCACCTGTTCGACGGAATGCGCGACCGGAACGTCGTCTCCTGGACGGCCCTCATGTCCGGGTACGCCAGCGCCGGCCGGCCCCGGGCGGCCGTCGCCCTCCTCCGCGCCATGGCACGCAGCGGCGTGCCACCCAACGCCTTCACCTTCTCTACAGCTGCCAGCTCGTGCGCGCGCCTGGCTGACGCCGGCCTTGGGCGGCAGGTGCATGCCCGCGCTGAGGTCGCGGGGTACGCGTGCGACAGCGTCGTTTCCACTGCGCTCGTCGACATGTACGGCAAGGCCGGCAGGGTCGGGGACGCCCGCGCTGTGTTCGACGCAATGCCCGTGACGGCGAGAAACGCGGTTTCCTGGGCCTCGATGCTGTCGGTGTATGCGCAGAACGCGCTCGGGCATGACGCTATCCAGCTCTTCGCCGAGCTCAGAACCAATGGCGAAGACATGGCGCCCAACCACTTCATGCTGTCAAGCGTGGTGAACGCGTGCGCGGGCGTCGGGCGGCTTGGCATCGGCAAGTGCATTCACGGCATGGTCCTCCACCATGGGCACGAAGACAATGACGTGGTTGCAGTGGCTCTGGTTGACATGTACTCCAAATGTGGCATCTACGAGTACTCAAAGAAGGTGTTCGACAGGATCAACCAGCCGTCGGTCATCCCCTACACCTCCATCATCGTGGCGACGGCGAAGTACGGCCTCGGCAGGTGCGCACTCGCTTTGTTCAGTGACATGGTTGGCCGAGGCGTGCAGCCAAACAGTGTCACACTGCTCGGCGTCCTGCACGCTTGCAGCCACTCAGGTCTGGTCGACACCGGCCTCCAGCTCCTCCGTTCAATGCGAAGCGAGTACGGCATTGATCCATGTGCCAGCCACTACACTTGTGCTGTCGACATGCTCGGTCGTGCAGGTCAGCTCGAGGCGGCATTCGAGCTGGCCGACGAAGCACAGGTCAATGGCAATGACGCCCTCATGCTGTGGAGCTCATTGCTGTCAGCTTGCCGGAACCACAAGCGCCTGGACCTAGCAACCATGGCTGGGCAGAAGGTATCAGAGTTCACCCAAGATGTGGCCGGCGCACTGGTGGTCATGTCGAACGCATACGCTTCAGCCGGTCAAGCCGACGACGCTGCTGCGGTGTGGTCGAACATGAGGCGGCGCGGCATTCGGAAGGATCCCGGGTGCAGCTGGATCGAGATAAAGGACATCTCCTACGTGTTCTACGCTGGCATGGTATCGCCTGCCGGCTCAAGGGCCGGTGAGGTGATGCTGCTGTTAGATGAATTGGAGGGCAAGATGAGGGAGAAGGGTTACAAGGGGAGAATTGGCAGTGCCAGAGTCCTTGATGCTGATGAAGAAGAGGATGGAAATCATCATCATCAGGAAGGCAGAGGTGTGATGGTTGGAGTGCACAGTGAGTTGCTGGCATTGGGGCTTGGATTGCTGGTGATCCCCAAGGGGATGGCCATTAGGGTGATGAAGAACCTGAGGATGTGCCGTGACTGCCATGAAGCGTTTAAGGTCATCAGTGCCATTGTGGAGAGGGAGTTCGTTGTCAGGGATCTCAACAGGTTCCACCACTTCAGGATGGGGTCATGTTCTTGCAATGACTACTGGTGA
Protein Sequence
- >LOC_Os12g06650.1
MTATSNAAAGAATLMPLLIHLLRGASDLASVSATHAKLLKLGAASSVASSNHLLAAYGRCGCTALARHLFDGMRDRNVVSWTALMSGYASAGRPRAAVALLRAMARSGVPPNAFTFSTAASSCARLADAGLGRQVHARAEVAGYACDSVVSTALVDMYGKAGRVGDARAVFDAMPVTARNAVSWASMLSVYAQNALGHDAIQLFAELRTNGEDMAPNHFMLSSVVNACAGVGRLGIGKCIHGMVLHHGHEDNDVVAVALVDMYSKCGIYEYSKKVFDRINQPSVIPYTSIIVATAKYGLGRCALALFSDMVGRGVQPNSVTLLGVLHACSHSGLVDTGLQLLRSMRSEYGIDPCASHYTCAVDMLGRAGQLEAAFELADEAQVNGNDALMLWSSLLSACRNHKRLDLATMAGQKVSEFTQDVAGALVVMSNAYASAGQADDAAAVWSNMRRRGIRKDPGCSWIEIKDISYVFYAGMVSPAGSRAGEVMLLLDELEGKMREKGYKGRIGSARVLDADEEEDGNHHHQEGRGVMVGVHSELLALGLGLLVIPKGMAIRVMKNLRMCRDCHEAFKVISAIVEREFVVRDLNRFHHFRMGSCSCNDYW*