Information report for OsIPMS2
Gene Details
|
|
Functional Descriptions
- In this study, rice OsIPMS1 and OsIPMS2 was cloned, and the roles of OsIPMS1 in seed vigor were mainly investigated.
Functional Keywords
Literature and News
Gene Resources
- UniProt: Q2QXY9
- EMBL: AP014968, DP000011
- AlphaFoldDB: Q2QXY9
- EnsemblPlants: Os12t0138900-01, Os12t0138900-02
- Gramene: Os12t0138900-01, Os12t0138900-02
- KEGG: osa:4351460
- Orthologous matrix: NTMRMLV
- InterPro: IPR000891, IPR002034, IPR005671
- PANTHER: PTHR10277, PTHR10277:SF9
- SUPFAM: SSF110921, SSF51569
- PROSITE: PS00815, PS50991
- Gene3D: 1.10.238.260, 3.20.20.70, 3.30.160.270
- OrthoDB: Q2QXY9
- SWISS-MODEL: Q2QXY9
- Conserved Domain Database: cd07940
- eggNOG: KOG2367
Sequences
cDNA Sequence
- >LOC_Os12g04440.1
GTCTTCTTCGCCGCAAAAACCACGCCGCCATCACAGCATTCGTGCATCCCACGAAACCCCCGTTGTCATGTCCAGATAAGAGCTCCACCTCTGACTCACACACACATCACCGAGAAGCAGAGCAAGTGCATCTCCCTCTCCCACCATTTGATTCGATTCCCCTAAACCCCCGAGTCGTCGACGCCACAAACCCCGGCGACCACCATGGCCTCCTCCCTCCTCTCCTCCCCAAAACCCTCCTCCTTCTCCTCCGCAAACCCCACCTCCACTCCACGCCCACGCGCCCAAACTCTCTCCCCCTTCCGCGCCGCCGCCCCACGCTTCTCCCATGGCCTCGCCACCGCCGCCGCCGCCGCAAACCCTAGCGCCTCCCGCCGCTGCTACCACCGCGCCTTCGCCCGCCCCGTCCGGGCGTCCATGGCGCAGCCGCGGCGCCCGGAGTACGTCCCCAACCGCATCGACGACCCCAACTACGTCCGCATCTTCGACACCACCCTCCGCGACGGGGAGCAGTCCCCCGGGGCCACCATGACCAGCGCCGAGAAGCTCGTCGTCGCGCGCCAGCTCGCCCGCCTCGGCGTCGACATCATCGAGGCCGGGTTCCCGGCCTCCTCCCCCGACGACCTCGACGCCGTGCGCTCCATCGCCATCGAGGTCGGGAACACGCCCGTCGGGGAGGACGGCCACGTGCCGGTCATCTGTGGCCTCTCGAGATGCAATAAGCGAGACATTGATGCTGCCTGGGAGGCCGTGCGGCACGCGCGGCGGCCGCGCATCCACACCTTCATTGCCACCAGCGAGATCCATATGCAGCACAAGCTAAGGAAGACGCCCGAGCAGGTGGTGGCCATTGCCAAGGAAATGGTGGCCTACGCCCGCAGCCTAGGCTGCCCTGATGTCGAGTTCAGCCCTGAAGACGCTGGCAGGTCAAACAGAGAGTTTCTATATCATATACTAGAGGAAGTCATAAAAGCTGGAGCAACAACACTCAATATCCCAGACACTGTTGGATACACTCTTCCTTATGAATTTGGGAAACTAATTGCTGATATAAAAGCAAACACTCCAGGAATTGAAAATGCCATTATTTCTACTCATTGCCAGAATGACCTTGGTCTAGCAACCGCAAATACATTAGCGGGCGCTCATGCAGGAGCACGGCAATTAGAGGTGACTATCAATGGTATTGGTGAAAGGGCTGGAAATGCTTCTTTGGAAGAGGTTGTGATGGCAATTAAATGTCGTCGAGAACTCTTAGGAGGTCTGTATACTGGAATCAATACCCAACATATCACTATGTCAAGCAAAATGGTACAAGAGCACAGTGGACTTCATGTACAACCACATAAAGCTATTGTCGGTGCCAATGCCTTTGCACATGAAAGTGGAATTCATCAGGATGGGATGCTTAAGTACAAAGGAACTTATGAAATAATTTCTCCTGATGATATTGGTCTAACACGTGCAAATGAGTTTGGTATTGTTCTTGGGAAGCTCAGTGGAAGGCATGCTGTGAGATCTAAACTAGTGGAGCTTGGATATGAAATCACTGACAAGGAATTTGAGGATTTCTTTAAACGCTACAAAGAGGTTGCAGAGAAGAAAAAGCGTGTAACTGATGAAGACATTGAGGCGCTGTTGTCTGATGAGATATTTCAGCCCAAGGTTTTTTGGTCCCTTGCTGATGTACAGGCAACTTGTGGAACACTTGGTCTGTCTACAGCAACTGTCAAACTGATAGGTCCGGATGGAGATGAGAAGATTGCATGTGCAGTTGGAACAGGTCCAGTTGATGCAGCTTACAAGGCTGTTGATGATATAATACAGATCCCAACTGTTCTTCGAGAATATAGCATGACATCGGTCACAGAAGGCATTGATGCAATTGCAACTACTAGAGTGGTTGTCACTGGAGATGTCAGCGACTCTAAACATGCTTTGACTGGTCACTCCTTCAACCGGGCATTCAGTGGGAGTGGTGCCGCACTGGATATTGTTGTTTCCAGTGTGCGAGCTTACCTGAGTGCCCTGAACAAGATGTCCAGTTTTGTTGGGGCTATCAAGGCTAGTAGTGAAGTATCTGAAAGCCAAAGAGTTCAAACCACAGAATGAGTCTTGACGCTCCTTGGTTTTCATATCGGATGGTTCTATGTTTCACATTCCCAGCAAGGAGTATGTGCTTGTTGAAACATGGTTTTTCCGTTTAGTGCATCTGGAGGATGTTCTGGGTTTCTTTGGTGGAGCCTGACTTAAGGTTGAACATCCAGGAAGTTTTGGGGTATGTAGTGTATAATTCATATTTGAAAATTGTATTTCCAATAAGACAATAATAAATAATTGTTTGACATATGAGTATTGCAAAACTATTACTGTAAGAAATTAATCGTGAGACCAACCTACGGTTGTACAGTATCGAGAACTTCTGAATTGAGGGTCAGCATTTCGAGTT - >LOC_Os12g04440.2
GTCTTCTTCGCCGCAAAAACCACGCCGCCATCACAGCATTCGTGCATCCCACGAAACCCCCGTTGTCATGTCCAGATAAGAGCTCCACCTCTGACTCACACACACATCACCGAGAAGCAGAGCAAGTGCATCTCCCTCTCCCACCATTTGATTCGATTCCCCTAAACCCCCGAGTCGTCGACGCCACAAACCCCGGCGACCACCATGGCCTCCTCCCTCCTCTCCTCCCCAAAACCCTCCTCCTTCTCCTCCGCAAACCCCACCTCCACTCCACGCCCACGCGCCCAAACTCTCTCCCCCTTCCGCGCCGCCGCCCCACGCTTCTCCCATGGCCTCGCCACCGCCGCCGCCGCCGCAAACCCTAGCGCCTCCCGCCGCTGCTACCACCGCGCCTTCGCCCGCCCCGTCCGGGCGTCCATGGCGCAGCCGCGGCGCCCGGAGTACGTCCCCAACCGCATCGACGACCCCAACTACGTCCGCATCTTCGACACCACCCTCCGCGACGGGGAGCAGTCCCCCGGGGCCACCATGACCAGCGCCGAGAAGCTCGTCGTCGCGCGCCAGCTCGCCCGCCTCGGCGTCGACATCATCGAGGCCGGGTTCCCGGCCTCCTCCCCCGACGACCTCGACGCCGTGCGCTCCATCGCCATCGAGGTCGGGAACACGCCCGTCGGGGAGGACGGCCACGTGCCGGTCATCTGTGGCCTCTCGAGATGCAATAAGCGAGACATTGATGCTGCCTGGGAGGCCGTGCGGCACGCGCGGCGGCCGCGCATCCACACCTTCATTGCCACCAGCGAGATCCATATGCAGCACAAGCTAAGGAAGACGCCCGAGCAGGTGGTGGCCATTGCCAAGGAAATGGTGGCCTACGCCCGCAGCCTAGGCTGCCCTGATGTCGAGTTCAGCCCTGAAGACGCTGGCAGGTCAAACAGAGAGTTTCTATATCATATACTAGAGGAAGTCATAAAAGCTGGAGCAACAACACTCAATATCCCAGACACTGTTGGATACACTCTTCCTTATGAATTTGGGAAACTAATTGCTGATATAAAAGCAAACACTCCAGGAATTGAAAATGCCATTATTTCTACTCATTGCCAGAATGACCTTGGTCTAGCAACCGCAAATACATTAGCGGGCGCTCATGCAGGAGCACGGCAATTAGAGGTGACTATCAATGGTATTGGTGAAAGGGCTGGAAATGCTTCTTTGGAAGAGGTTGTGATGGCAATTAAATGTCGTCGAGAACTCTTAGGAGGTCTGTATACTGGAATCAATACCCAACATATCACTATGTCAAGCAAAATGGTACAAGAGCACAGTGGACTTCATGTACAACCACATAAAGCTATTGTCGGTGCCAATGCCTTTGCACATGAAAGTGGAATTCATCAGGATGGGATGCTTAAGTACAAAGGAACTTATGAAATAATTTCTCCTGATGATATTGGTCTAACACGTGCAAATGAGTTTGGTATTGTTCTTGGGAAGCTCAGTGGAAGGCATGCTGTGAGATCTAAACTAGTGGAGCTTGGATATGAAATCACTGACAAGGAATTTGAGGATTTCTTTAAACGCTACAAAGAGGTTGCAGAGAAGAAAAAGCGTGTAACTGATGAAGACATTGAGGCGCTGTTGTCTGATGAGATATTTCAGCCCAAGGTTTTTTGGTCCCTTGCTGATGTACAGGCAACTTGTGGAACACTTGGTCTGTCTACAGCAACTGTCAAACTGATAGGTCCGGATGGAGATGAGAAGATTGCATGTGCAGTTGGAACAGGTCCAGTTGATGCAGCTTACAAGGCTGTTGATGATATAATACAGATCCCAACTGTTCTTCGAGAATATAGCATGACATCGGTCACAGAAGGCATTGATGCAATTGCAACTACTAGAGTGGTTGTCACTGGAGATGTCAGCGACTCTAAACATGCTTTGACTGGTCACTCCTTCAACCGGGCATTCAGTGGGAGTGGTGCCGCACTGGATATTGTTGTTTCCAGTGTGCGAGCTTACCTGAGTGCCCTGAACAAGATGTCCAGTTTTGTTGGGGCTATCAAGGCTAGTAGTGAAGTATCTGAAAGCCAAAGAGTTCAAACCACAGAATGAGTCTTGACGCTCCTTGGTTTTCATATCGGATGGTTCTATGTTTCACATTCCCAGCAAGGAGTATGTGCTTGTTGAAACATGGTTTTTCCGTTTAGTGCATCTGGAGGATGTTCTGGGTTTCTTTGGTGGAGCCTGACTTAAGGTTGAACATCCAGGAAGTTTTGGGGTATGTAGTGTATAATTCATATTTGAAAATTGTATTTCCAATAAGACAATAATAAATAATTGTTTGACATATGAGTATTGCAAAACTATTACTGTAAGAAATTAATCGTGAGACCAACCTACGGTTGTACAGTATCGAGAACTTCTGAATTGAGGGTCAGCATTTCGAGTT
CDS Sequence
- >LOC_Os12g04440.1
ATGGCCTCCTCCCTCCTCTCCTCCCCAAAACCCTCCTCCTTCTCCTCCGCAAACCCCACCTCCACTCCACGCCCACGCGCCCAAACTCTCTCCCCCTTCCGCGCCGCCGCCCCACGCTTCTCCCATGGCCTCGCCACCGCCGCCGCCGCCGCAAACCCTAGCGCCTCCCGCCGCTGCTACCACCGCGCCTTCGCCCGCCCCGTCCGGGCGTCCATGGCGCAGCCGCGGCGCCCGGAGTACGTCCCCAACCGCATCGACGACCCCAACTACGTCCGCATCTTCGACACCACCCTCCGCGACGGGGAGCAGTCCCCCGGGGCCACCATGACCAGCGCCGAGAAGCTCGTCGTCGCGCGCCAGCTCGCCCGCCTCGGCGTCGACATCATCGAGGCCGGGTTCCCGGCCTCCTCCCCCGACGACCTCGACGCCGTGCGCTCCATCGCCATCGAGGTCGGGAACACGCCCGTCGGGGAGGACGGCCACGTGCCGGTCATCTGTGGCCTCTCGAGATGCAATAAGCGAGACATTGATGCTGCCTGGGAGGCCGTGCGGCACGCGCGGCGGCCGCGCATCCACACCTTCATTGCCACCAGCGAGATCCATATGCAGCACAAGCTAAGGAAGACGCCCGAGCAGGTGGTGGCCATTGCCAAGGAAATGGTGGCCTACGCCCGCAGCCTAGGCTGCCCTGATGTCGAGTTCAGCCCTGAAGACGCTGGCAGGTCAAACAGAGAGTTTCTATATCATATACTAGAGGAAGTCATAAAAGCTGGAGCAACAACACTCAATATCCCAGACACTGTTGGATACACTCTTCCTTATGAATTTGGGAAACTAATTGCTGATATAAAAGCAAACACTCCAGGAATTGAAAATGCCATTATTTCTACTCATTGCCAGAATGACCTTGGTCTAGCAACCGCAAATACATTAGCGGGCGCTCATGCAGGAGCACGGCAATTAGAGGTGACTATCAATGGTATTGGTGAAAGGGCTGGAAATGCTTCTTTGGAAGAGGTTGTGATGGCAATTAAATGTCGTCGAGAACTCTTAGGAGGTCTGTATACTGGAATCAATACCCAACATATCACTATGTCAAGCAAAATGGTACAAGAGCACAGTGGACTTCATGTACAACCACATAAAGCTATTGTCGGTGCCAATGCCTTTGCACATGAAAGTGGAATTCATCAGGATGGGATGCTTAAGTACAAAGGAACTTATGAAATAATTTCTCCTGATGATATTGGTCTAACACGTGCAAATGAGTTTGGTATTGTTCTTGGGAAGCTCAGTGGAAGGCATGCTGTGAGATCTAAACTAGTGGAGCTTGGATATGAAATCACTGACAAGGAATTTGAGGATTTCTTTAAACGCTACAAAGAGGTTGCAGAGAAGAAAAAGCGTGTAACTGATGAAGACATTGAGGCGCTGTTGTCTGATGAGATATTTCAGCCCAAGGTTTTTTGGTCCCTTGCTGATGTACAGGCAACTTGTGGAACACTTGGTCTGTCTACAGCAACTGTCAAACTGATAGGTCCGGATGGAGATGAGAAGATTGCATGTGCAGTTGGAACAGGTCCAGTTGATGCAGCTTACAAGGCTGTTGATGATATAATACAGATCCCAACTGTTCTTCGAGAATATAGCATGACATCGGTCACAGAAGGCATTGATGCAATTGCAACTACTAGAGTGGTTGTCACTGGAGATGTCAGCGACTCTAAACATGCTTTGACTGGTCACTCCTTCAACCGGGCATTCAGTGGGAGTGGTGCCGCACTGGATATTGTTGTTTCCAGTGTGCGAGCTTACCTGAGTGCCCTGAACAAGATGTCCAGTTTTGTTGGGGCTATCAAGGCTAGTAGTGAAGTATCTGAAAGCCAAAGAGTTCAAACCACAGAATGA - >LOC_Os12g04440.2
ATGGCCTCCTCCCTCCTCTCCTCCCCAAAACCCTCCTCCTTCTCCTCCGCAAACCCCACCTCCACTCCACGCCCACGCGCCCAAACTCTCTCCCCCTTCCGCGCCGCCGCCCCACGCTTCTCCCATGGCCTCGCCACCGCCGCCGCCGCCGCAAACCCTAGCGCCTCCCGCCGCTGCTACCACCGCGCCTTCGCCCGCCCCGTCCGGGCGTCCATGGCGCAGCCGCGGCGCCCGGAGTACGTCCCCAACCGCATCGACGACCCCAACTACGTCCGCATCTTCGACACCACCCTCCGCGACGGGGAGCAGTCCCCCGGGGCCACCATGACCAGCGCCGAGAAGCTCGTCGTCGCGCGCCAGCTCGCCCGCCTCGGCGTCGACATCATCGAGGCCGGGTTCCCGGCCTCCTCCCCCGACGACCTCGACGCCGTGCGCTCCATCGCCATCGAGGTCGGGAACACGCCCGTCGGGGAGGACGGCCACGTGCCGGTCATCTGTGGCCTCTCGAGATGCAATAAGCGAGACATTGATGCTGCCTGGGAGGCCGTGCGGCACGCGCGGCGGCCGCGCATCCACACCTTCATTGCCACCAGCGAGATCCATATGCAGCACAAGCTAAGGAAGACGCCCGAGCAGGTGGTGGCCATTGCCAAGGAAATGGTGGCCTACGCCCGCAGCCTAGGCTGCCCTGATGTCGAGTTCAGCCCTGAAGACGCTGGCAGGTCAAACAGAGAGTTTCTATATCATATACTAGAGGAAGTCATAAAAGCTGGAGCAACAACACTCAATATCCCAGACACTGTTGGATACACTCTTCCTTATGAATTTGGGAAACTAATTGCTGATATAAAAGCAAACACTCCAGGAATTGAAAATGCCATTATTTCTACTCATTGCCAGAATGACCTTGGTCTAGCAACCGCAAATACATTAGCGGGCGCTCATGCAGGAGCACGGCAATTAGAGGTGACTATCAATGGTATTGGTGAAAGGGCTGGAAATGCTTCTTTGGAAGAGGTTGTGATGGCAATTAAATGTCGTCGAGAACTCTTAGGAGGTCTGTATACTGGAATCAATACCCAACATATCACTATGTCAAGCAAAATGGTACAAGAGCACAGTGGACTTCATGTACAACCACATAAAGCTATTGTCGGTGCCAATGCCTTTGCACATGAAAGTGGAATTCATCAGGATGGGATGCTTAAGTACAAAGGAACTTATGAAATAATTTCTCCTGATGATATTGGTCTAACACGTGCAAATGAGTTTGGTATTGTTCTTGGGAAGCTCAGTGGAAGGCATGCTGTGAGATCTAAACTAGTGGAGCTTGGATATGAAATCACTGACAAGGAATTTGAGGATTTCTTTAAACGCTACAAAGAGGTTGCAGAGAAGAAAAAGCGTGTAACTGATGAAGACATTGAGGCGCTGTTGTCTGATGAGATATTTCAGCCCAAGGTTTTTTGGTCCCTTGCTGATGTACAGGCAACTTGTGGAACACTTGGTCTGTCTACAGCAACTGTCAAACTGATAGGTCCGGATGGAGATGAGAAGATTGCATGTGCAGTTGGAACAGGTCCAGTTGATGCAGCTTACAAGGCTGTTGATGATATAATACAGATCCCAACTGTTCTTCGAGAATATAGCATGACATCGGTCACAGAAGGCATTGATGCAATTGCAACTACTAGAGTGGTTGTCACTGGAGATGTCAGCGACTCTAAACATGCTTTGACTGGTCACTCCTTCAACCGGGCATTCAGTGGGAGTGGTGCCGCACTGGATATTGTTGTTTCCAGTGTGCGAGCTTACCTGAGTGCCCTGAACAAGATGTCCAGTTTTGTTGGGGCTATCAAGGCTAGTAGTGAAGTATCTGAAAGCCAAAGAGTTCAAACCACAGAATGA
Protein Sequence
- >LOC_Os12g04440.1
MASSLLSSPKPSSFSSANPTSTPRPRAQTLSPFRAAAPRFSHGLATAAAAANPSASRRCYHRAFARPVRASMAQPRRPEYVPNRIDDPNYVRIFDTTLRDGEQSPGATMTSAEKLVVARQLARLGVDIIEAGFPASSPDDLDAVRSIAIEVGNTPVGEDGHVPVICGLSRCNKRDIDAAWEAVRHARRPRIHTFIATSEIHMQHKLRKTPEQVVAIAKEMVAYARSLGCPDVEFSPEDAGRSNREFLYHILEEVIKAGATTLNIPDTVGYTLPYEFGKLIADIKANTPGIENAIISTHCQNDLGLATANTLAGAHAGARQLEVTINGIGERAGNASLEEVVMAIKCRRELLGGLYTGINTQHITMSSKMVQEHSGLHVQPHKAIVGANAFAHESGIHQDGMLKYKGTYEIISPDDIGLTRANEFGIVLGKLSGRHAVRSKLVELGYEITDKEFEDFFKRYKEVAEKKKRVTDEDIEALLSDEIFQPKVFWSLADVQATCGTLGLSTATVKLIGPDGDEKIACAVGTGPVDAAYKAVDDIIQIPTVLREYSMTSVTEGIDAIATTRVVVTGDVSDSKHALTGHSFNRAFSGSGAALDIVVSSVRAYLSALNKMSSFVGAIKASSEVSESQRVQTTE* - >LOC_Os12g04440.2
MASSLLSSPKPSSFSSANPTSTPRPRAQTLSPFRAAAPRFSHGLATAAAAANPSASRRCYHRAFARPVRASMAQPRRPEYVPNRIDDPNYVRIFDTTLRDGEQSPGATMTSAEKLVVARQLARLGVDIIEAGFPASSPDDLDAVRSIAIEVGNTPVGEDGHVPVICGLSRCNKRDIDAAWEAVRHARRPRIHTFIATSEIHMQHKLRKTPEQVVAIAKEMVAYARSLGCPDVEFSPEDAGRSNREFLYHILEEVIKAGATTLNIPDTVGYTLPYEFGKLIADIKANTPGIENAIISTHCQNDLGLATANTLAGAHAGARQLEVTINGIGERAGNASLEEVVMAIKCRRELLGGLYTGINTQHITMSSKMVQEHSGLHVQPHKAIVGANAFAHESGIHQDGMLKYKGTYEIISPDDIGLTRANEFGIVLGKLSGRHAVRSKLVELGYEITDKEFEDFFKRYKEVAEKKKRVTDEDIEALLSDEIFQPKVFWSLADVQATCGTLGLSTATVKLIGPDGDEKIACAVGTGPVDAAYKAVDDIIQIPTVLREYSMTSVTEGIDAIATTRVVVTGDVSDSKHALTGHSFNRAFSGSGAALDIVVSSVRAYLSALNKMSSFVGAIKASSEVSESQRVQTTE*