Gene Details:
- MSU gene ID: LOC_Os11g47330
- RAPdb gene ID: Os11g0696200
- Gene Symbol: EDT1
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- Our results demonstrate that the timing of tapetum PCD must be tightly regulated for successful pollen development, and that EDT1 is involved in the tapetum PCD process.
- EDT1 localized in both the nucleus and the cytoplasm as observed in rice protoplast transient assays.
- EDT1 encodes a subunit of ATP-citrate lyase (ACL), and is specifically expressed in the tapetum of anthers.
Function-related keywords:
Literature:
- Earlier Degraded Tapetum1 (EDT1) Encodes an ATP-Citrate Lyase Required for Tapetum Programmed Cell Death . DOI: 10.1104/pp.19.00202 ; PMID: 31515447
- Gene Expression Dynamics in Rice Peduncles at the Heading Stage . DOI: 10.3389/fgene.2020.584678 ; PMID: 33343630
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os11g47330.1
ATCTTCTTTATATTCATTCCATTCCTCCCAAAGACGCAACGTGCACACACCACCACCACCTTCATCTCGGTGGCTTCGTTCACTCCGCCTACCTACCTACCTTTGCAGTTGGTTTGCTGAACCCTCCTCAAGAACCCACGCGCCTCTCGCGGCAGCAGCTAACCAAGCCATGGCGCGCAAGAAGATCCGGGAGTACGACTCCAAGCGCCTCCTCAAGGAGCACCTCAAGCGCCTCGCCGGTATCGACCTCCAGATCCTCTCCGCCCAGGTTACACAATCGACGGACTTCACAGAGCTGGTAAACCAGCAGCCATGGCTGTCAACCATGAAGTTGGTCGTGAAGCCCGACATGCTGTTCGGGAAGCGTGGCAAGAGCGGACTTGTGGCCCTCAACCTAGATATTGCTCAAGTCAAGGAGTTTGTGAAGGAGAGGCTGGGAGTTGAGGTCGAGATGGGTGGCTGCAAGGCTCCAATCACCACCTTCATTGTGGAGCCATTTGTACCCCATGATCAAGAATACTACCTTTCTATTGTCTCGGAGAGGCTGGGCAGCACCATTAGCTTCTCGGAATGTGGAGGAATAGAAATTGAGGAGAACTGGGACAAGGTTAAGACAATTTTTCTTCCCACTGAGAAGCCAATGACACCTGATGCATGTGCTCCCTTGATTGCTACCCTTCCATTGGAGGCACGTGGAAAAATTGGTGATTTCATTAAAGGAGTCTTTGCTGTTTTCCAAGACTTAGATTTCTCATTTCTCGAGATGAACCCATTTACCATCGTGAATGGAGAGCCGTATCCTCTGGACATGAGAGGAGAATTAGATGACACAGCAGCTTTCAAAAACTTCAAGAAGTGGGGAAATATCGAATTCCCACTACCATTCGGTAGAGTTCTCAGTTCTACAGAAGGCTTTATCCATGACTTGGATGAGAAGACAAGTGCATCTCTGAAGTTCACCGTTTTGAACCCAAAGGGGCGCATCTGGACAATGGTTGCTGGAGGTGGTGCCAGTGTCATATATGCTGATACAGTCGGAGATTTGGGATATGCTTCAGAATTAGGAAACTATGCAGAGTATAGCGGTGCTCCCAATGAGGAGGAGGTTCTGCAGTATGCTAGAGTAGTACTTGATTGTGCGACTGCTGATCCTGATGGCCGCAAGAGAGCTCTTCTCATTGGAGGGGGTATAGCTAACTTCACCGACGTCGGGGCCACATTTAGCGGCATCATTCGGGCCTTAAGAGAGAAGGAATCCAAGTTGAAGGCTGCAAGGATGCACATCTATGTCCGACGTGGTGGTCCAAATTACCAAACTGGGCTGGCTAAAATGCGCAAGCTTGGCGCAGAACTCGGCGTCCCGATTGAGGTGTATGGGCCAGAAGCGACGATGACTGGAATCTGCAAGCAAGCAATTGAATGCGTTATGGCCGCAGCATAAATGAAGATGCAAGTTCTGGGATCTGCAGGCAAGATGCTGAATGCGTGATGGGTGCGACATGGATGAGAGTGTGGTGTAGTTGCAGTAGTTCTCTGCAGATGGCTGATTTGTTTCTTGATACATGTTATACTTGGACGAGATCTGGATAGGTTATTGATGTACTGAAACTACTACTGCGATGCAATAAAAGTGAGAGTAGCGTTTCCTGATTTGTTCTCTTCTTGATTGTGATATTGTTGCAATGCAATCGCGCTGTATTTCATCTCACATTGAGATGTGTTCCTGATTAAGTTTAGCCCCTGGTTTTGGTTCAAGTTTAA
CDS Sequence
- >LOC_Os11g47330.1
ATGGCGCGCAAGAAGATCCGGGAGTACGACTCCAAGCGCCTCCTCAAGGAGCACCTCAAGCGCCTCGCCGGTATCGACCTCCAGATCCTCTCCGCCCAGGTTACACAATCGACGGACTTCACAGAGCTGGTAAACCAGCAGCCATGGCTGTCAACCATGAAGTTGGTCGTGAAGCCCGACATGCTGTTCGGGAAGCGTGGCAAGAGCGGACTTGTGGCCCTCAACCTAGATATTGCTCAAGTCAAGGAGTTTGTGAAGGAGAGGCTGGGAGTTGAGGTCGAGATGGGTGGCTGCAAGGCTCCAATCACCACCTTCATTGTGGAGCCATTTGTACCCCATGATCAAGAATACTACCTTTCTATTGTCTCGGAGAGGCTGGGCAGCACCATTAGCTTCTCGGAATGTGGAGGAATAGAAATTGAGGAGAACTGGGACAAGGTTAAGACAATTTTTCTTCCCACTGAGAAGCCAATGACACCTGATGCATGTGCTCCCTTGATTGCTACCCTTCCATTGGAGGCACGTGGAAAAATTGGTGATTTCATTAAAGGAGTCTTTGCTGTTTTCCAAGACTTAGATTTCTCATTTCTCGAGATGAACCCATTTACCATCGTGAATGGAGAGCCGTATCCTCTGGACATGAGAGGAGAATTAGATGACACAGCAGCTTTCAAAAACTTCAAGAAGTGGGGAAATATCGAATTCCCACTACCATTCGGTAGAGTTCTCAGTTCTACAGAAGGCTTTATCCATGACTTGGATGAGAAGACAAGTGCATCTCTGAAGTTCACCGTTTTGAACCCAAAGGGGCGCATCTGGACAATGGTTGCTGGAGGTGGTGCCAGTGTCATATATGCTGATACAGTCGGAGATTTGGGATATGCTTCAGAATTAGGAAACTATGCAGAGTATAGCGGTGCTCCCAATGAGGAGGAGGTTCTGCAGTATGCTAGAGTAGTACTTGATTGTGCGACTGCTGATCCTGATGGCCGCAAGAGAGCTCTTCTCATTGGAGGGGGTATAGCTAACTTCACCGACGTCGGGGCCACATTTAGCGGCATCATTCGGGCCTTAAGAGAGAAGGAATCCAAGTTGAAGGCTGCAAGGATGCACATCTATGTCCGACGTGGTGGTCCAAATTACCAAACTGGGCTGGCTAAAATGCGCAAGCTTGGCGCAGAACTCGGCGTCCCGATTGAGGTGTATGGGCCAGAAGCGACGATGACTGGAATCTGCAAGCAAGCAATTGAATGCGTTATGGCCGCAGCATAA
Protein Sequence
- >LOC_Os11g47330.1
MARKKIREYDSKRLLKEHLKRLAGIDLQILSAQVTQSTDFTELVNQQPWLSTMKLVVKPDMLFGKRGKSGLVALNLDIAQVKEFVKERLGVEVEMGGCKAPITTFIVEPFVPHDQEYYLSIVSERLGSTISFSECGGIEIEENWDKVKTIFLPTEKPMTPDACAPLIATLPLEARGKIGDFIKGVFAVFQDLDFSFLEMNPFTIVNGEPYPLDMRGELDDTAAFKNFKKWGNIEFPLPFGRVLSSTEGFIHDLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVLDCATADPDGRKRALLIGGGIANFTDVGATFSGIIRALREKESKLKAARMHIYVRRGGPNYQTGLAKMRKLGAELGVPIEVYGPEATMTGICKQAIECVMAAA*