Information report for EDT1
Gene Details
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Functional Descriptions
- Our results demonstrate that the timing of tapetum PCD must be tightly regulated for successful pollen development, and that EDT1 is involved in the tapetum PCD process.
- EDT1 localized in both the nucleus and the cytoplasm as observed in rice protoplast transient assays.
- EDT1 encodes a subunit of ATP-citrate lyase (ACL), and is specifically expressed in the tapetum of anthers.
Literature and News
Gene Resources
- UniProt: Q2QZ86
- EMBL: AK069911, AP008217, AP014967
- AlphaFoldDB: Q2QZ86
- EnsemblPlants: Os11t0696200-01
- Gramene: Os11t0696200-01
- Orthologous matrix: SMASEAC
- InterPro: IPR013650, IPR016102, IPR032263
- PANTHER: PTHR11815, PTHR11815:SF10
- SUPFAM: SSF52210, SSF56059
- Gene3D: 3.30.470.110, 3.40.50.261
- SWISS-MODEL: Q2QZ86
- eggNOG: KOG1254
Sequences
cDNA Sequence
- >LOC_Os11g47330.1
ATCTTCTTTATATTCATTCCATTCCTCCCAAAGACGCAACGTGCACACACCACCACCACCTTCATCTCGGTGGCTTCGTTCACTCCGCCTACCTACCTACCTTTGCAGTTGGTTTGCTGAACCCTCCTCAAGAACCCACGCGCCTCTCGCGGCAGCAGCTAACCAAGCCATGGCGCGCAAGAAGATCCGGGAGTACGACTCCAAGCGCCTCCTCAAGGAGCACCTCAAGCGCCTCGCCGGTATCGACCTCCAGATCCTCTCCGCCCAGGTTACACAATCGACGGACTTCACAGAGCTGGTAAACCAGCAGCCATGGCTGTCAACCATGAAGTTGGTCGTGAAGCCCGACATGCTGTTCGGGAAGCGTGGCAAGAGCGGACTTGTGGCCCTCAACCTAGATATTGCTCAAGTCAAGGAGTTTGTGAAGGAGAGGCTGGGAGTTGAGGTCGAGATGGGTGGCTGCAAGGCTCCAATCACCACCTTCATTGTGGAGCCATTTGTACCCCATGATCAAGAATACTACCTTTCTATTGTCTCGGAGAGGCTGGGCAGCACCATTAGCTTCTCGGAATGTGGAGGAATAGAAATTGAGGAGAACTGGGACAAGGTTAAGACAATTTTTCTTCCCACTGAGAAGCCAATGACACCTGATGCATGTGCTCCCTTGATTGCTACCCTTCCATTGGAGGCACGTGGAAAAATTGGTGATTTCATTAAAGGAGTCTTTGCTGTTTTCCAAGACTTAGATTTCTCATTTCTCGAGATGAACCCATTTACCATCGTGAATGGAGAGCCGTATCCTCTGGACATGAGAGGAGAATTAGATGACACAGCAGCTTTCAAAAACTTCAAGAAGTGGGGAAATATCGAATTCCCACTACCATTCGGTAGAGTTCTCAGTTCTACAGAAGGCTTTATCCATGACTTGGATGAGAAGACAAGTGCATCTCTGAAGTTCACCGTTTTGAACCCAAAGGGGCGCATCTGGACAATGGTTGCTGGAGGTGGTGCCAGTGTCATATATGCTGATACAGTCGGAGATTTGGGATATGCTTCAGAATTAGGAAACTATGCAGAGTATAGCGGTGCTCCCAATGAGGAGGAGGTTCTGCAGTATGCTAGAGTAGTACTTGATTGTGCGACTGCTGATCCTGATGGCCGCAAGAGAGCTCTTCTCATTGGAGGGGGTATAGCTAACTTCACCGACGTCGGGGCCACATTTAGCGGCATCATTCGGGCCTTAAGAGAGAAGGAATCCAAGTTGAAGGCTGCAAGGATGCACATCTATGTCCGACGTGGTGGTCCAAATTACCAAACTGGGCTGGCTAAAATGCGCAAGCTTGGCGCAGAACTCGGCGTCCCGATTGAGGTGTATGGGCCAGAAGCGACGATGACTGGAATCTGCAAGCAAGCAATTGAATGCGTTATGGCCGCAGCATAAATGAAGATGCAAGTTCTGGGATCTGCAGGCAAGATGCTGAATGCGTGATGGGTGCGACATGGATGAGAGTGTGGTGTAGTTGCAGTAGTTCTCTGCAGATGGCTGATTTGTTTCTTGATACATGTTATACTTGGACGAGATCTGGATAGGTTATTGATGTACTGAAACTACTACTGCGATGCAATAAAAGTGAGAGTAGCGTTTCCTGATTTGTTCTCTTCTTGATTGTGATATTGTTGCAATGCAATCGCGCTGTATTTCATCTCACATTGAGATGTGTTCCTGATTAAGTTTAGCCCCTGGTTTTGGTTCAAGTTTAA
CDS Sequence
- >LOC_Os11g47330.1
ATGGCGCGCAAGAAGATCCGGGAGTACGACTCCAAGCGCCTCCTCAAGGAGCACCTCAAGCGCCTCGCCGGTATCGACCTCCAGATCCTCTCCGCCCAGGTTACACAATCGACGGACTTCACAGAGCTGGTAAACCAGCAGCCATGGCTGTCAACCATGAAGTTGGTCGTGAAGCCCGACATGCTGTTCGGGAAGCGTGGCAAGAGCGGACTTGTGGCCCTCAACCTAGATATTGCTCAAGTCAAGGAGTTTGTGAAGGAGAGGCTGGGAGTTGAGGTCGAGATGGGTGGCTGCAAGGCTCCAATCACCACCTTCATTGTGGAGCCATTTGTACCCCATGATCAAGAATACTACCTTTCTATTGTCTCGGAGAGGCTGGGCAGCACCATTAGCTTCTCGGAATGTGGAGGAATAGAAATTGAGGAGAACTGGGACAAGGTTAAGACAATTTTTCTTCCCACTGAGAAGCCAATGACACCTGATGCATGTGCTCCCTTGATTGCTACCCTTCCATTGGAGGCACGTGGAAAAATTGGTGATTTCATTAAAGGAGTCTTTGCTGTTTTCCAAGACTTAGATTTCTCATTTCTCGAGATGAACCCATTTACCATCGTGAATGGAGAGCCGTATCCTCTGGACATGAGAGGAGAATTAGATGACACAGCAGCTTTCAAAAACTTCAAGAAGTGGGGAAATATCGAATTCCCACTACCATTCGGTAGAGTTCTCAGTTCTACAGAAGGCTTTATCCATGACTTGGATGAGAAGACAAGTGCATCTCTGAAGTTCACCGTTTTGAACCCAAAGGGGCGCATCTGGACAATGGTTGCTGGAGGTGGTGCCAGTGTCATATATGCTGATACAGTCGGAGATTTGGGATATGCTTCAGAATTAGGAAACTATGCAGAGTATAGCGGTGCTCCCAATGAGGAGGAGGTTCTGCAGTATGCTAGAGTAGTACTTGATTGTGCGACTGCTGATCCTGATGGCCGCAAGAGAGCTCTTCTCATTGGAGGGGGTATAGCTAACTTCACCGACGTCGGGGCCACATTTAGCGGCATCATTCGGGCCTTAAGAGAGAAGGAATCCAAGTTGAAGGCTGCAAGGATGCACATCTATGTCCGACGTGGTGGTCCAAATTACCAAACTGGGCTGGCTAAAATGCGCAAGCTTGGCGCAGAACTCGGCGTCCCGATTGAGGTGTATGGGCCAGAAGCGACGATGACTGGAATCTGCAAGCAAGCAATTGAATGCGTTATGGCCGCAGCATAA
Protein Sequence
- >LOC_Os11g47330.1
MARKKIREYDSKRLLKEHLKRLAGIDLQILSAQVTQSTDFTELVNQQPWLSTMKLVVKPDMLFGKRGKSGLVALNLDIAQVKEFVKERLGVEVEMGGCKAPITTFIVEPFVPHDQEYYLSIVSERLGSTISFSECGGIEIEENWDKVKTIFLPTEKPMTPDACAPLIATLPLEARGKIGDFIKGVFAVFQDLDFSFLEMNPFTIVNGEPYPLDMRGELDDTAAFKNFKKWGNIEFPLPFGRVLSSTEGFIHDLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVLDCATADPDGRKRALLIGGGIANFTDVGATFSGIIRALREKESKLKAARMHIYVRRGGPNYQTGLAKMRKLGAELGVPIEVYGPEATMTGICKQAIECVMAAA*