Gene Details:

Functional Descriptions:

  • Isolation of TSCD11 Gene for Early Chloroplast Development under High Temperature in Rice.
  • The TSCD11 gene encodes a seryl-tRNA synthetase localized to chloroplast.
  • Compared with the wild type (WT), mutation in TSCD11 led to significant alteration in expression levels of genes associated with chlorophyll biosynthesis, photosynthesis and chloroplast development under high temperature.
  • The TSCD11 mutant developed albino leaves at the 3-leaf stage under high temperature (35 C), but had normal green leaves under low temperature (25 C).
  • Consistent with the albino phenotype, impaired chloroplasts, decreased chlorophyll content and increased ROS accumulation were found in the TSCD11 mutant at 35 C.

Literature:

Gene Resources:

  • NCBI ID:
  • UniProt accessions:

Sequences:

cDNA Sequence
  • >LOC_Os11g39670.1
    CCAAAAAACCCCCACCTTTCTCTTATCCCCTCTATCCGCCGCTCGCCGGCCATCTCCCTCCCCCACCACCACCACCACCGCCGCCTCCTCTCCGGCGAGATGCTGACCTGCGGCCGCTTCCTCTCCTCCTCCGCCGCCGCCTCCACCCCCTCCCTCTCCCCCTTCCGGAACCTAACCCTCTCCCTCCTCCGCCGTCCCCATCTCCGCCTCCTCTCCTCCTCCGCCACCGCCTCCGCCGCCGCCGCCGCCGTCGAGCCCGACACCAAGGGTGGCGCGGGTGGCGGCGCCGCGAAGCCGCAGTGGAAGGCGGCGATAGACTTCAAGTGGATCCGGGAGAACACGGACGCCGTCGCCGCCAACATCCGCGACCGCAACTCCGCCGCCAACCTCGACCTCGTCCTCCAGCTCTACGACGAGTACCTCGCCTTGCAGAAGGAAGTTGAACGGCTCCGAGCTGAAAGAAATGCAGTTGCTAATAAGATGAAAGGGAAATTAGAACCATCTGTGCGTCAAGCCCTTGTTGAAGAAGGCAAGAACCTGAAAGAAGGGCTTATTGCCCTAGAAGAGGACCTTGTTCAGCTGACTGATAAGCTTCAACTAGAAGCACAAAGCATTCCTAACACCACACATCCAGATGCTCCTGTAGGGGGTGAGGAAAGTTCTGTCGTCAGAAAAGAGGTTGGTAGTCAGAGAAACTTCAATTTCACCATTAGAGATCACCTTCAGCTGGGAAAAGAACTTGATTTGTTTGATTTTGATGCAGCTGCTGAGGTTAGTGGCTCGAAGTTCTACTACTTAAAGAATGAAGCTGTTCTGTTGGAGATGGCCCTTGTTAATTGGGCCATCACTGAGGTCTCAAAGAAAGGTTTCACACCACTAATAACTCCGGAGATTGTAAGGTCATCTGTTGTTGAGAAATGTGGCTTCCAGCCAAGGGCCCAAAATACTCAGGTTTATTCGATCGATAACAGTGATCAGTGCCTCATAGGAACTGCAGAGATTCCTGTTGGCGGCATCCATATGGACTCTATACTCCCTGATTCTGATTTGCCTCGAAAATATGTAGCCTATTCACATTGTTTTCGCACAGAAGCTGGTGCCGCAGGTGCTGCCACTAGGGGCCTCTACCGTGTACATCAGTTTAGCAAGGTTGAGATGTTTGTATTTTGCCGGCCAGAGGAGAGCGACAAGTGCCATGAAGAACTTATCACTATTGAAGAGGAACTTTATGCATCACTTGGACTTCATTTCAAAACTTTGGATATGGCGACTGGGGATCTGGGAGCACCGGCCTACAGAAAGTTTGACATTGAGGCATGGATGCCAGGCCTAGATAGGTACGGTGAGATCTCGAGCGCGTCAAACTGCACAGACTATCAGAGCAGGCGGCTGGGCATCCGGTTTCGCCCATCACCTGCAGATCCTCCACCGGCGAACGCCAAGAAAGGAAAGGGCAGCTCAGGCCCAACACAGTTTGTCCACACGCTCAACGCGACAGCGGTTGCTGTTCCTCGCTTGATCATATGCATCCTGGAGAACTTTCAGCAAGAAGATGGAACGGTTGTGATCCCAGAGCCACTGAGGCCCTTCATGGGCGGACTTGAAGTGCTCTCCCCGAAAACCAAATGATCAGCTTGAAGGTCACCACGTTTACTTCGAATCTTGTTTTTTTTATAGATTTACAGTCTTTTTTTCCCCCGAGGATATTGGCAAGTGAATGTGCAGAATTTCAAAGAAATCTGTGGTCGATTCCAAATGTTCCATGCGAAATTCGTGGCTGTTAGTTGGCCACCGATTGTCGATTGTTGTTTTGGCAACATATCCAGGTTAACTATTTCCTCCTTGTCAAAATATAGCAAACTTGGAATGGATATATAGTCCAATGATTATGGACAAGGGGCTAGCCAGATTCTTTGGACTAGTATGCTTTCCATCAGTTTTAATAGTTTGCTATATTTTGGGATGGAGGGAGTAGTTGAACAAACTCAGTATTACACTTGTAGTTAACTGGTAACTCCACATATGCCCATTGTATTGGATATCCCTTGCGAAATATTTCCTCCGTCCCAAAGTATATGGTTTTTAGGTGGATGAGACATCTTAATACTATGAATCTGAACAGATTTAGTACTAGGATGTATTTCATTCACCCAAAATATGTTATACTTTGGGATGGTGGGAGTATTTGTCCACGGGAGAACTATACCGGAGTAGTTTGTGCTAGAACAATAGTACTAGTGCTTTGTCAGTTTAATATCTGTTCGTTTACGGCTGTGTTTAGTTCAGCACAAAGTTTGGATTTTGGTTGAAATTGGAGATGATGTGATTGAAAA
  • >LOC_Os11g39670.2
    CCAAAAAACCCCCACCTTTCTCTTATCCCCTCTATCCGCCGCTCGCCGGCCATCTCCCTCCCCCACCACCACCACCACCGCCGCCTCCTCTCCGGCGAGATGCTGACCTGCGGCCGCTTCCTCTCCTCCTCCGCCGCCGCCTCCACCCCCTCCCTCTCCCCCTTCCGGAACCTAACCCTCTCCCTCCTCCGCCGTCCCCATCTCCGCCTCCTCTCCTCCTCCGCCACCGCCTCCGCCGCCGCCGCCGCCGTCGAGCCCGACACCAAGGGTGGCGCGGGTGGCGGCGCCGCGAAGCCGCAGTGGAAGGCGGCGATAGACTTCAAGTGGATCCGGGAGAACACGGACGCCGTCGCCGCCAACATCCGCGACCGCAACTCCGCCGCCAACCTCGACCTCGTCCTCCAGCTCTACGACGAGTACCTCGCCTTGCAGAAGGAAGTTGAACGGCTCCGAGCTGAAAGAAATGCAGTTGCTAATAAGATGAAAGGGAAATTAGAACCATCTGTGCGTCAAGCCCTTGTTGAAGAAGGCAAGAACCTGAAAGAAGGGCTTATTGCCCTAGAAGAGGACCTTGTTCAGCTGACTGATAAGCTTCAACTAGAAGCACAAAGCATTCCTAACACCACACATCCAGATGCTCCTGTAGGGGGTGAGGAAAGTTCTGTCGTCAGAAAAGAGGTTGGTAGTCAGAGAAACTTCAATTTCACCATTAGAGATCACCTTCAGCTGGGAAAAGAACTTGATTTGTTTGATTTTGATGCAGCTGCTGAGGTTAGTGGCTCGAAGTTCTACTACTTAAAGAATGAAGCTGTTCTGTTGGAGATGGCCCTTGTTAATTGGGCCATCACTGAGGTCTCAAAGAAAGGTTTCACACCACTAATAACTCCGGAGATTGTAAGGTCATCTGTTGTTGAGAAATGTGGCTTCCAGCCAAGGGCCCAAAATACTCAGGTTTATTCGATCGATAACAGTGATCAGTGCCTCATAGGAACTGCAGAGATTCCTGTTGGCGGCATCCATATGGACTCTATACTCCCTGATTCTGATTTGCCTCGAAAATATGTAGCCTATTCACATTGTTTTCGCACAGAAGCTGGTGCCGCAGGTGCTGCCACTAGGGGCCTCTACCGTGTACATCAGTTTAGCAAGGTTGAGATGTTTGTATTTTGCCGGCCAGAGGAGAGCGACAAGTGCCATGAAGAACTTATCACTATTGAAGAGGAACTTTATGCATCACTTGGACTTCATTTCAAAACTTTGGATATGGCGACTGGGGATCTGGGAGCACCGGCCTACAGAAAGTTTGACATTGAGGCATGGATGCCAGGCCTAGATAGGTACGGTGAGATCTCGAGCGCGTCAAACTGCACAGACTATCAGAGCAGGCGGCTGGGCATCCGGTTTCGCCCATCACCTGCAGATCCTCCACCGGCGAACGCCAAGAAAGGAAAGGGCAGCTCAGGCCCAACACAGTTTGTCCACACGCTCAACGCGACAGCGGTTGCTGTTCCTCGCTTGATCATATGCATCCTGGAGAACTTTCAGCAAGAAGATGGAACGGTTGTGATCCCAGAGCCACTGAGGCCCTTCATGGGCGGACTTGAAGTGCTCTCCCCGAAAACCAAATGATCAGCTTGAAGGTCACCACGTTTACTTCGAATCTTGTTTTTTTTATAGATTTACAGTCTTTTTTTCCCCCGAGGATATTGGCAAGTGAATGTGCAGAATTTCAAAGAAATCTGTGGTCGATTCCAAATGTTCCATGCGAAATTCGTGGCTGTTAGTTGGCCACCGATTGTCGATTGTTGTTTTGGCAACATATCCAGGTTAACTATTTCCTCCTTGTCAAAATATAGCAAACTTGGAATGGATATATAGTCCAATGATTATGGACAAGGGGCTAGCCAGATTCTTTGGACTAGTATGCTTTCCATCAGTTTTAATAGTTTGCTATATTTTGGGATGGAGGGAGTAGTTGAACAAACTCAGTATTACACTTGTAGTTAACTGGTAACTCCACATATGCCCATTGTATTGGATATCCCTTGCGAAATATTTCCTCCGTCCCAAAGTATATGGTTTTTAGGTGGATGAGACATCTTAATACTATGAATCTGAACAGATTTAGTACTAGGATGTATTTCATTCACCCAAAATATGTTATACTTTGGGATGGTGGGAGTATTTGTCCACGGGAGAACTATACCGGAGTAGTTTGTGCTAGAACAATAGTACTAGTGCTTTGTCAGTTTAATATCTGTTCGTTTACGGCTGTGTTTAGTTCAGCACAAAGTTTGGATTTTGGTTGAAATTGGAGATGATGTGATTGAAAA
CDS Sequence
  • >LOC_Os11g39670.1
    ATGCTGACCTGCGGCCGCTTCCTCTCCTCCTCCGCCGCCGCCTCCACCCCCTCCCTCTCCCCCTTCCGGAACCTAACCCTCTCCCTCCTCCGCCGTCCCCATCTCCGCCTCCTCTCCTCCTCCGCCACCGCCTCCGCCGCCGCCGCCGCCGTCGAGCCCGACACCAAGGGTGGCGCGGGTGGCGGCGCCGCGAAGCCGCAGTGGAAGGCGGCGATAGACTTCAAGTGGATCCGGGAGAACACGGACGCCGTCGCCGCCAACATCCGCGACCGCAACTCCGCCGCCAACCTCGACCTCGTCCTCCAGCTCTACGACGAGTACCTCGCCTTGCAGAAGGAAGTTGAACGGCTCCGAGCTGAAAGAAATGCAGTTGCTAATAAGATGAAAGGGAAATTAGAACCATCTGTGCGTCAAGCCCTTGTTGAAGAAGGCAAGAACCTGAAAGAAGGGCTTATTGCCCTAGAAGAGGACCTTGTTCAGCTGACTGATAAGCTTCAACTAGAAGCACAAAGCATTCCTAACACCACACATCCAGATGCTCCTGTAGGGGGTGAGGAAAGTTCTGTCGTCAGAAAAGAGGTTGGTAGTCAGAGAAACTTCAATTTCACCATTAGAGATCACCTTCAGCTGGGAAAAGAACTTGATTTGTTTGATTTTGATGCAGCTGCTGAGGTTAGTGGCTCGAAGTTCTACTACTTAAAGAATGAAGCTGTTCTGTTGGAGATGGCCCTTGTTAATTGGGCCATCACTGAGGTCTCAAAGAAAGGTTTCACACCACTAATAACTCCGGAGATTGTAAGGTCATCTGTTGTTGAGAAATGTGGCTTCCAGCCAAGGGCCCAAAATACTCAGGTTTATTCGATCGATAACAGTGATCAGTGCCTCATAGGAACTGCAGAGATTCCTGTTGGCGGCATCCATATGGACTCTATACTCCCTGATTCTGATTTGCCTCGAAAATATGTAGCCTATTCACATTGTTTTCGCACAGAAGCTGGTGCCGCAGGTGCTGCCACTAGGGGCCTCTACCGTGTACATCAGTTTAGCAAGGTTGAGATGTTTGTATTTTGCCGGCCAGAGGAGAGCGACAAGTGCCATGAAGAACTTATCACTATTGAAGAGGAACTTTATGCATCACTTGGACTTCATTTCAAAACTTTGGATATGGCGACTGGGGATCTGGGAGCACCGGCCTACAGAAAGTTTGACATTGAGGCATGGATGCCAGGCCTAGATAGGTACGGTGAGATCTCGAGCGCGTCAAACTGCACAGACTATCAGAGCAGGCGGCTGGGCATCCGGTTTCGCCCATCACCTGCAGATCCTCCACCGGCGAACGCCAAGAAAGGAAAGGGCAGCTCAGGCCCAACACAGTTTGTCCACACGCTCAACGCGACAGCGGTTGCTGTTCCTCGCTTGATCATATGCATCCTGGAGAACTTTCAGCAAGAAGATGGAACGGTTGTGATCCCAGAGCCACTGAGGCCCTTCATGGGCGGACTTGAAGTGCTCTCCCCGAAAACCAAATGA
  • >LOC_Os11g39670.2
    ATGCTGACCTGCGGCCGCTTCCTCTCCTCCTCCGCCGCCGCCTCCACCCCCTCCCTCTCCCCCTTCCGGAACCTAACCCTCTCCCTCCTCCGCCGTCCCCATCTCCGCCTCCTCTCCTCCTCCGCCACCGCCTCCGCCGCCGCCGCCGCCGTCGAGCCCGACACCAAGGGTGGCGCGGGTGGCGGCGCCGCGAAGCCGCAGTGGAAGGCGGCGATAGACTTCAAGTGGATCCGGGAGAACACGGACGCCGTCGCCGCCAACATCCGCGACCGCAACTCCGCCGCCAACCTCGACCTCGTCCTCCAGCTCTACGACGAGTACCTCGCCTTGCAGAAGGAAGTTGAACGGCTCCGAGCTGAAAGAAATGCAGTTGCTAATAAGATGAAAGGGAAATTAGAACCATCTGTGCGTCAAGCCCTTGTTGAAGAAGGCAAGAACCTGAAAGAAGGGCTTATTGCCCTAGAAGAGGACCTTGTTCAGCTGACTGATAAGCTTCAACTAGAAGCACAAAGCATTCCTAACACCACACATCCAGATGCTCCTGTAGGGGGTGAGGAAAGTTCTGTCGTCAGAAAAGAGGTTGGTAGTCAGAGAAACTTCAATTTCACCATTAGAGATCACCTTCAGCTGGGAAAAGAACTTGATTTGTTTGATTTTGATGCAGCTGCTGAGGTTAGTGGCTCGAAGTTCTACTACTTAAAGAATGAAGCTGTTCTGTTGGAGATGGCCCTTGTTAATTGGGCCATCACTGAGGTCTCAAAGAAAGGTTTCACACCACTAATAACTCCGGAGATTGTAAGGTCATCTGTTGTTGAGAAATGTGGCTTCCAGCCAAGGGCCCAAAATACTCAGGTTTATTCGATCGATAACAGTGATCAGTGCCTCATAGGAACTGCAGAGATTCCTGTTGGCGGCATCCATATGGACTCTATACTCCCTGATTCTGATTTGCCTCGAAAATATGTAGCCTATTCACATTGTTTTCGCACAGAAGCTGGTGCCGCAGGTGCTGCCACTAGGGGCCTCTACCGTGTACATCAGTTTAGCAAGGTTGAGATGTTTGTATTTTGCCGGCCAGAGGAGAGCGACAAGTGCCATGAAGAACTTATCACTATTGAAGAGGAACTTTATGCATCACTTGGACTTCATTTCAAAACTTTGGATATGGCGACTGGGGATCTGGGAGCACCGGCCTACAGAAAGTTTGACATTGAGGCATGGATGCCAGGCCTAGATAGGTACGGTGAGATCTCGAGCGCGTCAAACTGCACAGACTATCAGAGCAGGCGGCTGGGCATCCGGTTTCGCCCATCACCTGCAGATCCTCCACCGGCGAACGCCAAGAAAGGAAAGGGCAGCTCAGGCCCAACACAGTTTGTCCACACGCTCAACGCGACAGCGGTTGCTGTTCCTCGCTTGATCATATGCATCCTGGAGAACTTTCAGCAAGAAGATGGAACGGTTGTGATCCCAGAGCCACTGAGGCCCTTCATGGGCGGACTTGAAGTGCTCTCCCCGAAAACCAAATGA
Protein Sequence
  • >LOC_Os11g39670.1
    MLTCGRFLSSSAAASTPSLSPFRNLTLSLLRRPHLRLLSSSATASAAAAAVEPDTKGGAGGGAAKPQWKAAIDFKWIRENTDAVAANIRDRNSAANLDLVLQLYDEYLALQKEVERLRAERNAVANKMKGKLEPSVRQALVEEGKNLKEGLIALEEDLVQLTDKLQLEAQSIPNTTHPDAPVGGEESSVVRKEVGSQRNFNFTIRDHLQLGKELDLFDFDAAAEVSGSKFYYLKNEAVLLEMALVNWAITEVSKKGFTPLITPEIVRSSVVEKCGFQPRAQNTQVYSIDNSDQCLIGTAEIPVGGIHMDSILPDSDLPRKYVAYSHCFRTEAGAAGAATRGLYRVHQFSKVEMFVFCRPEESDKCHEELITIEEELYASLGLHFKTLDMATGDLGAPAYRKFDIEAWMPGLDRYGEISSASNCTDYQSRRLGIRFRPSPADPPPANAKKGKGSSGPTQFVHTLNATAVAVPRLIICILENFQQEDGTVVIPEPLRPFMGGLEVLSPKTK*
  • >LOC_Os11g39670.2
    MLTCGRFLSSSAAASTPSLSPFRNLTLSLLRRPHLRLLSSSATASAAAAAVEPDTKGGAGGGAAKPQWKAAIDFKWIRENTDAVAANIRDRNSAANLDLVLQLYDEYLALQKEVERLRAERNAVANKMKGKLEPSVRQALVEEGKNLKEGLIALEEDLVQLTDKLQLEAQSIPNTTHPDAPVGGEESSVVRKEVGSQRNFNFTIRDHLQLGKELDLFDFDAAAEVSGSKFYYLKNEAVLLEMALVNWAITEVSKKGFTPLITPEIVRSSVVEKCGFQPRAQNTQVYSIDNSDQCLIGTAEIPVGGIHMDSILPDSDLPRKYVAYSHCFRTEAGAAGAATRGLYRVHQFSKVEMFVFCRPEESDKCHEELITIEEELYASLGLHFKTLDMATGDLGAPAYRKFDIEAWMPGLDRYGEISSASNCTDYQSRRLGIRFRPSPADPPPANAKKGKGSSGPTQFVHTLNATAVAVPRLIICILENFQQEDGTVVIPEPLRPFMGGLEVLSPKTK*