Information report for OsbHLH061;OsbHLHq11
Gene Details
|
|
Functional Descriptions
- The bHLH transcription factor OsbHLH061 interacts with OsPRI1, and this study used molecular, genetics, biochemical and physiological approaches to functionally characterise OsbHLH061 and how it affects Fe homeostasis.
- OsbHLH061 links TOPLESS/TOPLESS-RELATED repressor proteins with POSITIVE REGULATOR OF IRON HOMEOSTASIS 1 to maintain iron homeostasis in rice.
- OsbHLH061 knockout or overexpression lines increase or decrease Fe accumulation in shoots respectively.
- OsbHLHq11 is expected to increase photosynthetic efficiency by being involved in the chlorophyll content, and is expected to be utilized as a new genetic resource for breeding high-yield rice.
- OsbHLHq11 was finally selected through screening of genes related to chlorophyll content in the RM26981-RM287 region.
- The relative expression level of the gene of OsbHLHq11 was highly expressed in cultivars with low chlorophyll content, and is expected to have a similar function to BHLH62 of the Gramineae genus.
Functional Keywords
Literature and News
- OsbHLH061 links TOPLESS/TOPLESS-RELATED repressor proteins with POSITIVE REGULATOR OF IRON HOMEOSTASIS 1 to maintain iron homeostasis in rice . DOI: 10.1111/nph.18096 ; PMID: 35288933
- OsbHLHq11, the Basic Helix-Loop-Helix Transcription Factor, Involved in Regulation of Chlorophyll Content in Rice . DOI: 10.3390/biology11071000 ; PMID: 36101381
Gene Resources
- UniProt: A0A8J8XTX3
- EMBL: AP008217, CM000148
- EnsemblPlants: Os11t0601700-01
- Gramene: Os11t0601700-01
- KEGG: dosa:Os11g0601700, osa:4350864
- Orthologous matrix: CARMGNN
- InterPro: IPR011598, IPR036638
- PANTHER: PTHR47075, PTHR47075:SF2
- SUPFAM: SSF47459
- PROSITE: PS50888
- Gene3D: 4.10.280.10
- OrthoDB: A0A8J8XTX3
- SWISS-MODEL: A0A8J8XTX3
Sequences
cDNA Sequence
- >LOC_Os11g38870.1
GTGCTCGCCTCCTTCCCCCACCTTTCCCACTTCCCACCCTCCCCTCCCTCTCGGTCTTCGTCTCCCTCCCCTCTCCTCCCTCCTCCTTCCAAATCTGCAGCTCAAGCTGGTGTTGGTGGTGTTGGTGGTGGTAGGCGGCGGCGTCGCCTTCTCCTCCTCTTCTTGCTGACCCCGCCTGACTGGCTTCCTTCCCCTTCCACACCTGCCGGATCGGGTGGCTGGGTTGGTTGAGGGTCCAAGAAAGAAAGATTTTGGGGGTTCGGGGGTGAACCCCCCTCCCCATGCCCCAAGTGAGGAACCAGAATCTGGGCATGGTGGCTGACACGGAGAGCTCGGGGTCACTGGGTGGCAGCTCAAATGCTGCTTCTGACAAGGCTGTTGATGGGTCTCTTGACAAAAGATCTCAGGAAAAGGCTCCAAAGAAAACTCATAAAGCTGAACGAGAGAAACTTAAGCGTGACCAGTTGAATGACCTTTTTGTTGAGCTCAGCAGTATGCTTGATCCTGAACGACAAAATAGTGGAAAGGCTACTGTGTTAGGTGATGCTGCACGAGTTCTGCGGGATCTTGTTTCTCAAGTAGAATCTCTCAGAAAGGAACAGTCCGCTCTTCTAACTGAGCGTCAATACGTTGGTTCAGAGAATAATGAGCTGCAAGAAGAGAATATCATGCTCAGAGCCCAAATATTAGAACTGCATAATGAGATTTGTGCAAGGATGGGAAACAACCACCTCAATCAAAGCAATCTTGCGATGTCACAACCAGTAGCCAACAATGGCAGTAACTCAGCAACTCAACCCGTTCCACATCACATATGGGGCAATGGTCCGAATTTAGCTATGGTGCACCCAACAAACACATTATCTCCGTTGCACAATCAGCACCATCAGTCTGCTGGTGCCAGCCAGGTTTATGCGTCACGGCCTCAGGAGCTGCAGCTCTTTCCAGGGACCTCAGTATCAACAGAGCGAGAACGATCCCGAGCTGGAAGTGGAAGCACCCCGGCTACTTCTTCAGGCCTGACGGATTCTTTGCCAGGGCAGCTTCGCCTCAGCCTCCCGCAATCTTCTCAAGAAGAAAACAGCAGCGGCAGCAAGAAAGGTCGAAAAAAGGGCTAGCCGGCCAGTTGACACTTGACAGTTGCTAAAAAAGAATCGATAAATCGATACTTGGTGAATGGTGATAGTTACACACTCCTGTAAATACTGCGAAGCGCTTACTGATACCTACTGTGATAGTTGCCCTCTGTTGTAATTTGTATTTGTAGTGCTTGCTCTGAAACTTAGATCACGTTTGACTATAGTTTTCCACTTCCAGTCCTTTTACGGATATATGTTGCCATATTACAGAGTTGTTTACCAGGAAGAGAGAAAAATGATGCAATTCGATAGCAGTGTTAACTGATGATAATTATATGATCCCTGTCACCAAGTCATGAAAATCTGATCTTGTATGTTCATGGGCAGCTTGTTTCAGCATTACAAGTTGAAGAAATATTTGTAATCTGTTGCAAACTGCATGTTTATGGCTATGAGAAATGATCAACAAGCACAGCTGAAACCATGAGACATGCAAAGTATATGCTTCTTGAATCTATGGAAATGCTAAGTCCTGCTACCGAACATCATATTGTTCATCCTAAGACAATCATCAAATCGAAAGAACACAACTCCTGATCTCCCCTATCACACTGAAAAGAATTGAACTCCCCAACAACTGAAAATAATCACACATGATCAGCACCTCTTACTCCTCTGAACCCTTCTCTTCTGAAGAACTTGCTGTACTCTCCTCCTCCTCCTCGGAGCTCCTCTCTTGTGAAGAGCTCCCCGCCTTCTTCTTCATCTTCTCCGGCTCTGGCTCCGGCTCCGAGCTCTTGTCGTCGGCGGTCCAGTACCGCTTGACGGCGTAGAGCACCTTCTCCGGTATGTGGGGGCTGTCCTCGTGGTTCGCCATGATCATCTTCCACCGCATCCCGCTCGCGATCCTCTGAACCTTGAGGAGGACCTCAATGTCGTCCCGGAGGATCACCGTGCCCTCCGGCCGCAGGATCCGATCCATCTCCAGCAGGATGTCCTCCATCTTGCACCT - >LOC_Os11g38870.2
GTGCTCGCCTCCTTCCCCCACCTTTCCCACTTCCCACCCTCCCCTCCCTCTCGGTCTTCGTCTCCCTCCCCTCTCCTCCCTCCTCCTTCCAAATCTGCAGCTCAAGCTGGTGTTGGTGGTGTTGGTGGTGGTAGGCGGCGGCGTCGCCTTCTCCTCCTCTTCTTGCTGACCCCGCCTGACTGGCTTCCTTCCCCTTCCACACCTGCCGGATCGGGTGGCTGGGTTGGTTGAGGGTCCAAGAAAGAAAGATTTTGGGGGTTCGGGGGTGAACCCCCCTCCCCATGCCCCAAGTGAGGAACCAGAATCTGGGCATGGTGGCTGACACGGAGAGCTCGGGGTCACTGGGTGGCAGCTCAAATGCTGCTTCTGACAAGGCTGTTGATGGGTCTCTTGACAAAAGATCTCAGGAAAAGGCTCCAAAGAAAACTCATAAAGCTGAACGAGAGAAACTTAAGCGTGACCAGTTGAATGACCTTTTTGTTGAGCTCAGCAGTATGCTTGATCCTGAACGACAAAATAGTGGAAAGGCTACTGTGTTAGGTGATGCTGCACGAGTTCTGCGGGATCTTGTTTCTCAAGTAGAATCTCTCAGAAAGGAACAGTCCGCTCTTCTAACTGAGCGTCAATACGTTGGTTCAGAGAATAATGAGCTGCAAGAAGAGAATATCATGCTCAGAGCCCAAATATTAGAACTGCATAATGAGATTTGTGCAAGGATGGGAAACAACCACCTCAATCAAAGCAATCTTGCGATGTCACAACCAGTAGCCAACAATGGCAGTAACTCAGCAACTCAACCCGTTCCACATCACATATGGGGCAATGGTCCGAATTTAGCTATGGTGCACCCAACAAACACATTATCTCCGTTGCACAATCAGCACCATCAGTCTGCTGGTGCCAGCCAGGTTTATGCGTCACGGCCTCAGGAGCTGCAGCTCTTTCCAGGGACCTCAGTATCAACAGAGCGAGAACGATCCCGAGCTGGAAGTGGAAGCACCCCGGCTACTTCTTCAGGCCTGACGGATTCTTTGCCAGGGCAGCTTCGCCTCAGCCTCCCGCAATCTTCTCAAGAAGAAAACAGCAGCGGCAGCAAGAAAGGTCGAAAAAAGGGCTAGCCGGCCAGTTGACACTTGACAGTTGCTAAAAAAGAATCGATAAATCGATACTTGGTGAATGGTGATAGTTACACACTCCTGTAAATACTGCGAAGCGCTTACTGATACCTACTGTGATAGTTGCCCTCTGTTGTAATTTGTATTTGTAGTGCTTGCTCTGAAACTTAGATCACGTTTGACTATAGTTTTCCACTTCCAGTCCTTTTACGGATATATGTTGCCATATTACAGAGTTGTTTACCAGGAAGAGAGAAAAATGATGCAATTCGATAGCAGTGTTAACTGATGATAATTATATGATCCCTGTCACCAAGTCATGAAAATCTGATCTTGTATGTTCATGGGCAGCTTGTTTCAGCATTACAAGTTGAAGAAATATTTGTAATCTGTTGCAAACTGCATGTTTATGGCTATGAGAAATGATCAACAAGCACAGCTGAAACCATGAGACATGCAAAGTATATGCTTCTTGAATCTATGGAAATGCTAAGTCCTGCTACCGAACATCATATTGTTCATCCTAAGACAATCATCAAATCGAAAGAACACAACTCCTGATCTCCCCTATCACACTGAAAAGAATTGAACTCCCCAACAACTGAAAATAATCACACATGATCAGCACCTCTTACTCCTCTGAACCCTTCTCTTCTGAAGAACTTGCTGTACTCTCCTCCTCCTCCTCGGAGCTCCTCTCTTGTGAAGAGCTCCCCGCCTTCTTCTTCATCTTCTCCGGCTCTGGCTCCGGCTCCGAGCTCTTGTCGTCGGCGGTCCAGTACCGCTTGACGGCGTAGAGCACCTTCTCCGGTATGTGGGGGCTGTCCTCGTGGTTCGCCATGATCATCTTCCACCGCATCCCGCTCGCGATCCTCTGAACCTTGAGGAGGACCTCAATGTCGTCCCGGAGGATCACCGTGCCCTCCGGCCGCAGGATCCGATCCATCTCCAGCAGGATGTCCTCCATCTTGCACCT
CDS Sequence
- >LOC_Os11g38870.1
ATGCCCCAAGTGAGGAACCAGAATCTGGGCATGGTGGCTGACACGGAGAGCTCGGGGTCACTGGGTGGCAGCTCAAATGCTGCTTCTGACAAGGCTGTTGATGGGTCTCTTGACAAAAGATCTCAGGAAAAGGCTCCAAAGAAAACTCATAAAGCTGAACGAGAGAAACTTAAGCGTGACCAGTTGAATGACCTTTTTGTTGAGCTCAGCAGTATGCTTGATCCTGAACGACAAAATAGTGGAAAGGCTACTGTGTTAGGTGATGCTGCACGAGTTCTGCGGGATCTTGTTTCTCAAGTAGAATCTCTCAGAAAGGAACAGTCCGCTCTTCTAACTGAGCGTCAATACGTTGGTTCAGAGAATAATGAGCTGCAAGAAGAGAATATCATGCTCAGAGCCCAAATATTAGAACTGCATAATGAGATTTGTGCAAGGATGGGAAACAACCACCTCAATCAAAGCAATCTTGCGATGTCACAACCAGTAGCCAACAATGGCAGTAACTCAGCAACTCAACCCGTTCCACATCACATATGGGGCAATGGTCCGAATTTAGCTATGGTGCACCCAACAAACACATTATCTCCGTTGCACAATCAGCACCATCAGTCTGCTGGTGCCAGCCAGGTTTATGCGTCACGGCCTCAGGAGCTGCAGCTCTTTCCAGGGACCTCAGTATCAACAGAGCGAGAACGATCCCGAGCTGGAAGTGGAAGCACCCCGGCTACTTCTTCAGGCCTGACGGATTCTTTGCCAGGGCAGCTTCGCCTCAGCCTCCCGCAATCTTCTCAAGAAGAAAACAGCAGCGGCAGCAAGAAAGGTCGAAAAAAGGGCTAG - >LOC_Os11g38870.2
ATGCCCCAAGTGAGGAACCAGAATCTGGGCATGGTGGCTGACACGGAGAGCTCGGGGTCACTGGGTGGCAGCTCAAATGCTGCTTCTGACAAGGCTGTTGATGGGTCTCTTGACAAAAGATCTCAGGAAAAGGCTCCAAAGAAAACTCATAAAGCTGAACGAGAGAAACTTAAGCGTGACCAGTTGAATGACCTTTTTGTTGAGCTCAGCAGTATGCTTGATCCTGAACGACAAAATAGTGGAAAGGCTACTGTGTTAGGTGATGCTGCACGAGTTCTGCGGGATCTTGTTTCTCAAGTAGAATCTCTCAGAAAGGAACAGTCCGCTCTTCTAACTGAGCGTCAATACGTTGGTTCAGAGAATAATGAGCTGCAAGAAGAGAATATCATGCTCAGAGCCCAAATATTAGAACTGCATAATGAGATTTGTGCAAGGATGGGAAACAACCACCTCAATCAAAGCAATCTTGCGATGTCACAACCAGTAGCCAACAATGGCAGTAACTCAGCAACTCAACCCGTTCCACATCACATATGGGGCAATGGTCCGAATTTAGCTATGGTGCACCCAACAAACACATTATCTCCGTTGCACAATCAGCACCATCAGTCTGCTGGTGCCAGCCAGGTTTATGCGTCACGGCCTCAGGAGCTGCAGCTCTTTCCAGGGACCTCAGTATCAACAGAGCGAGAACGATCCCGAGCTGGAAGTGGAAGCACCCCGGCTACTTCTTCAGGCCTGACGGATTCTTTGCCAGGGCAGCTTCGCCTCAGCCTCCCGCAATCTTCTCAAGAAGAAAACAGCAGCGGCAGCAAGAAAGGTCGAAAAAAGGGCTAG
Protein Sequence
- >LOC_Os11g38870.1
MPQVRNQNLGMVADTESSGSLGGSSNAASDKAVDGSLDKRSQEKAPKKTHKAEREKLKRDQLNDLFVELSSMLDPERQNSGKATVLGDAARVLRDLVSQVESLRKEQSALLTERQYVGSENNELQEENIMLRAQILELHNEICARMGNNHLNQSNLAMSQPVANNGSNSATQPVPHHIWGNGPNLAMVHPTNTLSPLHNQHHQSAGASQVYASRPQELQLFPGTSVSTERERSRAGSGSTPATSSGLTDSLPGQLRLSLPQSSQEENSSGSKKGRKKG* - >LOC_Os11g38870.2
MPQVRNQNLGMVADTESSGSLGGSSNAASDKAVDGSLDKRSQEKAPKKTHKAEREKLKRDQLNDLFVELSSMLDPERQNSGKATVLGDAARVLRDLVSQVESLRKEQSALLTERQYVGSENNELQEENIMLRAQILELHNEICARMGNNHLNQSNLAMSQPVANNGSNSATQPVPHHIWGNGPNLAMVHPTNTLSPLHNQHHQSAGASQVYASRPQELQLFPGTSVSTERERSRAGSGSTPATSSGLTDSLPGQLRLSLPQSSQEENSSGSKKGRKKG*