Information report for SR1
Gene Details
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Functional Descriptions
- SR1 mutation affected the whole root-development process, producing shorter radicles, adventitious roots, and lateral roots, abnormal xylem development, causing dwarfing, and decreasing the water potential and moisture content.
- SR1 was largely expressed in the roots, but only in developing root meristems and tracheary elements.
- The membrane transport of the SR1 mutants was blocked, affecting cell division in the root apical region and root tracheary element development.
- The study of SR1 will deepen our understanding of the function of EXO70 genes in rice and guide future studies on the molecular mechanisms involved in plant root development.
- The shortness of the SR1 mutant roots was caused by the presence of fewer meristem cells.
Functional Keywords
Literature and News
Gene Resources
- UniProt: Q2R2B3
- EMBL: AK109785, AP014967, DP000010
- AlphaFoldDB: Q2R2B3
- EnsemblPlants: Os11t0572200-01
- Gramene: Os11t0572200-01
- KEGG: dosa:Os11g0572200
- Orthologous matrix: IREEDSW
- InterPro: IPR004140, IPR016159, IPR046364
- PANTHER: PTHR12542, PTHR12542:SF179
- SUPFAM: SSF74788
- Gene3D: 1.20.1280.170
- OrthoDB: Q2R2B3
- SWISS-MODEL: Q2R2B3
- eggNOG: KOG2344
Sequences
cDNA Sequence
- >LOC_Os11g36400.1
ACATGCCTAATGAGAGGAAAATATAGAAGAGCGCGTTGACACCGTTGACTTTGGATTTTCCGTCTCCTTCCTCCGAAGTGCAGAGAAGAAAAGGAGGAGCTGAGCTGAGCTGATTGCTTGATTCCTCGCTCGTTCAATCTACTCTAATCTATCTCTATAGGAAGGGAAACCCAAACCATAATGCAAAGCCGTCTCGCAGAGGAGTTGCGAGCGCTGAAGTTCGACCGTGTTTGGCGGCCAAGTCCTCATCGCTCGGAATCGGATGGCGGCAGCTGCAGCTACCGCAACTCGATCCAGCGGGTCGTCACCGCGTCCGTTGCCGCCGCGTCCACCAGCAGCACCACCCTCGTCTTCCCGTCGAGTGGCTCGGTCACGAGCTCGTCTTCGGCATCCTTTACCTCCTCCGCTCCCGGCTCGGAGGCGCACGGTACTCCAAGCTCCGGGCCCGAGAGCTACAGGTTGCTGCGCGGGGAGGCGTTCCGGGGCCTCAGCGAGATCGCGAGTCATATGGTCAGCGACAGGTACACCGAGAGGCTAATAACGGAGTTCTCCCGGCCGCGGCTGGGGAGCGGCAGCGGCGGCGGCGGCGGCGGCGACGAGATACTGCAGACCTGGTTCTCCGACCTTGGCGTTGACTGGGTTCTCAGAGTCGACGAGATGAACCTGCAGGAGAAGCCATGGAGCGGCGTGGAGGAGATGATCAAGGGGTGGCTCGCCGCGCTCACCGTCATGGCGGAAGCCCTCCGTCTGACGAAGGCCACCCTCAGCAGCGGCGATGGCGACTCCGGCGGTGTCATTCCGGTGCTTCCGATCGAGAAGTACAGGCCACAGATATCTGCACCGGCGTGGATCGACGACGACCACGCCGGTGTTACATTACATGATGTAAGTCCTGGCTCTGGCTCGTCGAATCTCGACCAAGAAAGCTCAGATCCGGCTCCAAACACGAGCAGGAGCAGGAGCATTGCCATTGCTACGGTCAAGCAAGCTATAACAGCGTATTCCCAAGCGGCGTCATCGAGGTCCTACAGGTACGACCAGCACGGAGCTGCAGGGCCTGAATTCCAATTCGCGCTCTTCGCCAAGGCAAGCCTGGTGAAGATGATGTGCTTCCCGGACGCTATCGCCGCGCTGAGCAGATCGCCGGAGAAGATCCTCCGCGTGATCGACATGTACGCGGTGGTCTCGGGCGTCTCCCCGAGCCTCCTGGCGCTGCTCCCCGGAGCGACCAAATGGTTGGTTTCCGAGAGGATCACGGCCGTGCTCAAGACGCTGAGCGGCATGATGAGGGGCATACTCCATGATCTGGAGAGTCTGATCCGAGAGGAGGATTCGTGGCGGACGACGGCGCAGGGGAACGACATCCACCCGGTCAATCAAATCGCGACGTGCTGGTCCAGGAGGGCGAGGACGACGACGGCGACGACGAGCTGTTCTCCATCGGGGAGCTATACCAGCTCGCGGAGGAGAAATCGTCGCTGACGAGCACCGTCGCCAGGCTGATCAACTCGGTGGACGCCATGATCGAGGACAGGTCCAAGATGTACGCAGCCGCCGGCGGGCGGATGCACATCTTCCTGCTCAACAACGACCACTTCATACTGCAGCAGGCGGAGCCTTCGTTGCAGTCGTTCATGGGCGCCTACTGGTACGCAAAGCGGAAGCAGCGGGTCGATCGGCGCATCAAGGAGTACCTCGATCTGTCCTGGGGAAATGTCGTCTCGTGCCTGGGGTACGCAGGGCAGAGCCGCAGGAGGTCGTCGCTTTTCCGTAGTGTCTCGGCGCTGGTGGAGTTCAACTCCTTGTTGCAGATAACCTACCACACGGAGAAGCTCTGGAAGATCAATAGCCCTCAGCTGCGAACCGTGCTGCGCAATTCGGTGTGCGGGAAGGTAATCTCTGCTTACCGAGCCTACCTGGAGACTCAGGGACAGGGCGGCCAGTTAGGAACATCAGCCACGTATACCCCCGAGGATCTGGAAGATATGTTGCAAAATCTATTCGAAGGGTGAACCTTTCTTTTCCATATATATGGAGTTTTGA
CDS Sequence
- >LOC_Os11g36400.1
ATGCAAAGCCGTCTCGCAGAGGAGTTGCGAGCGCTGAAGTTCGACCGTGTTTGGCGGCCAAGTCCTCATCGCTCGGAATCGGATGGCGGCAGCTGCAGCTACCGCAACTCGATCCAGCGGGTCGTCACCGCGTCCGTTGCCGCCGCGTCCACCAGCAGCACCACCCTCGTCTTCCCGTCGAGTGGCTCGGTCACGAGCTCGTCTTCGGCATCCTTTACCTCCTCCGCTCCCGGCTCGGAGGCGCACGGTACTCCAAGCTCCGGGCCCGAGAGCTACAGGTTGCTGCGCGGGGAGGCGTTCCGGGGCCTCAGCGAGATCGCGAGTCATATGGTCAGCGACAGGTACACCGAGAGGCTAATAACGGAGTTCTCCCGGCCGCGGCTGGGGAGCGGCAGCGGCGGCGGCGGCGGCGGCGACGAGATACTGCAGACCTGGTTCTCCGACCTTGGCGTTGACTGGGTTCTCAGAGTCGACGAGATGAACCTGCAGGAGAAGCCATGGAGCGGCGTGGAGGAGATGATCAAGGGGTGGCTCGCCGCGCTCACCGTCATGGCGGAAGCCCTCCGTCTGACGAAGGCCACCCTCAGCAGCGGCGATGGCGACTCCGGCGGTGTCATTCCGGTGCTTCCGATCGAGAAGTACAGGCCACAGATATCTGCACCGGCGTGGATCGACGACGACCACGCCGGTGTTACATTACATGATGTAAGTCCTGGCTCTGGCTCGTCGAATCTCGACCAAGAAAGCTCAGATCCGGCTCCAAACACGAGCAGGAGCAGGAGCATTGCCATTGCTACGGTCAAGCAAGCTATAACAGCGTATTCCCAAGCGGCGTCATCGAGGTCCTACAGGTACGACCAGCACGGAGCTGCAGGGCCTGAATTCCAATTCGCGCTCTTCGCCAAGGCAAGCCTGGTGAAGATGATGTGCTTCCCGGACGCTATCGCCGCGCTGAGCAGATCGCCGGAGAAGATCCTCCGCGTGATCGACATGTACGCGGTGGTCTCGGGCGTCTCCCCGAGCCTCCTGGCGCTGCTCCCCGGAGCGACCAAATGGTTGGTTTCCGAGAGGATCACGGCCGTGCTCAAGACGCTGAGCGGCATGATGAGGGGCATACTCCATGATCTGGAGAGTCTGATCCGAGAGGAGGATTCGTGGCGGACGACGGCGCAGGGGAACGACATCCACCCGGTCAATCAAATCGCGACGTGCTGGTCCAGGAGGGCGAGGACGACGACGGCGACGACGAGCTGTTCTCCATCGGGGAGCTATACCAGCTCGCGGAGGAGAAATCGTCGCTGA
Protein Sequence
- >LOC_Os11g36400.1
MQSRLAEELRALKFDRVWRPSPHRSESDGGSCSYRNSIQRVVTASVAAASTSSTTLVFPSSGSVTSSSSASFTSSAPGSEAHGTPSSGPESYRLLRGEAFRGLSEIASHMVSDRYTERLITEFSRPRLGSGSGGGGGGDEILQTWFSDLGVDWVLRVDEMNLQEKPWSGVEEMIKGWLAALTVMAEALRLTKATLSSGDGDSGGVIPVLPIEKYRPQISAPAWIDDDHAGVTLHDVSPGSGSSNLDQESSDPAPNTSRSRSIAIATVKQAITAYSQAASSRSYRYDQHGAAGPEFQFALFAKASLVKMMCFPDAIAALSRSPEKILRVIDMYAVVSGVSPSLLALLPGATKWLVSERITAVLKTLSGMMRGILHDLESLIREEDSWRTTAQGNDIHPVNQIATCWSRRARTTTATTSCSPSGSYTSSRRRNRR*