Information report for HAN1
Gene Details
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Functional Descriptions
- Natural variants in HAN1 diverged between indica and japonica rice during domestication.
- Natural variation in the HAN1 gene confers chilling tolerance in rice and allowed adaptation to a temperate climate.
- A specific allele from temperate japonica rice, which gained a putative MYB cis-element in the promoter of HAN1 during the divergence of the two japonica ecotypes, enhances the chilling tolerance of temperate japonica rice and allows it to adapt to a temperate climate.
- HAN1 encodes an oxidase that catalyzes the conversion of biologically active jasmonoyl-L-isoleucine (JA-Ile) to the inactive form 12-hydroxy-JA-Ile (12OH-JA-Ile) and fine-tunes the JA-mediated chilling response.
Functional Keywords
Literature and News
Sequences
cDNA Sequence
- >LOC_Os11g29290.1
ATGGCGTGGTTCGTCGCGGCTTGGAGCTGCCTCCTTGTGGTGGTGATGGTGAGCTCGATGAGGCTTAGTAGGTCAGCTTCATCGTCCTGTGGATCTTCTTGCGGCCATGGCGGGTGGGGGCCGAGGAGCTACCCGGTGATCGGGTGCCTGGTGGCGTTCTACCGCAACCGGCGGCGGCTGCTGGACTGGTACACGGAGATGCTGGCGGCGTCGCCGTCGCAGACGATCGTCGTTGACCGGCTGGGCGCGCGGCGCACGGTGGTGACGGCGAACCCGGCGAACGTCGAGCACATCCTCCGGGCGAGGTTCGCCAACTACCCCAAGGGGAAGCCGTTCACCGACGTGCTCGGCGACCTGCTCGGCATGGGCATCTTCAACGTCGACGGCGAGCTCTGGCACGCCCAGCGCAAGCTCGTCAGCCACGAGTTCTCCGCGCGCGCGCTCCGGGACCTCGAGGTCACCGTGCTCGAGGCCGAGGCGCGGGACCGCCTCGTCCCGGCGCTCGCCGCGGCGTCGCGCGGCGGCGGGGTGGTGGACATGCAGGACGTGCTCCGGCGGTTCGCGTTCGACGTCATCTGCCGGGTCTCGCTCGGCGTTGACCCGGGATGCCTCGACCCGGCATTGCCGGCGCCGAGGCTGGCCGCGGCGTTCGACACGGCGGCGGGGATCATCGCCCGGCGAGGCGCGGCGCCCGTGGCCGCCGTGTGGAAGGTGAAGCGCGCGCTCGACGCCGGGTCGGAGCGGCGGCTGAGGGAGGAGGTCGGGGTGATCCATGAGGCCGTGATGGGGCTCATCCGGAGCCGGAGGAAGGAGCGCGCGCTCCTCCTGGTCAACGGCAATGGCGTCGGCGGCGGCGGCGGCGCGAGGAGCGACCTGCTGTCGCGGATGATCGAATGCGGGTACCCCGACGAGGCGATCCGCGACATGGTGATCAGCTTCATCATGGCCGGCCGCGACACCACCTCGTCGGCGCTCACCTGGTTCTTCTGGCTCCTCATGCGCCACCGCGGCGTCGAGGCCCAGGTGCTCGACGAGATCGCCGCGACGCGCCGCGCCCGCGGCGCGGGGGAAGAAGGCGGAGACGACGGCGAGGGCGAGGGGCTCGACCTCGACGACTACCGGAGGATGCGCGTCCTCCACGCGGCGCTGTGCGAGACGATGCGGCTGTACCCGCCGGTGGCGTGGGACTCGAAGCATGCGGCGGCGGACGACGTGCTCCCCGACGGCACGGCGGTGGGGCGCGGCGACCGCGTCACCTACTTCCAGTACGGGATGGGGAGGATGGAGGCCATCTGGGGCGCCGACGCCGCCGACTTCAGCCTCGACAGGTGGCTCTCCCTCCCGCGCGGCGGCGGCGACGGCGCCGCCGCCGCCTCGCCAGCCGCCGCTGCGTTCGCCGGCGTGTCGCCGTTCAAGTACCCGGTGTTCCAGGGCGGGCCGAGGACGTGCCTCGGCAAGGAGATGGCGTTCGTCCAGATGAAGTTCGTCGCCAGCGCCGTGCTCCGCCGCTTCGAGCTCCGCCCCGTCGACGAGGGCCGCACGCCGGCGTTCGTGCCGCTCATGACGGCTCACATGGCCGGCGGCCTCAACGTGACGGTGCGGCGGAGAACGCCGGCGCCGGCGACGTCGACGGCGGCCAATGGCACAGGAGGGGAATTGACCAGTAGTTAA
CDS Sequence
- >LOC_Os11g29290.1
ATGGCGTGGTTCGTCGCGGCTTGGAGCTGCCTCCTTGTGGTGGTGATGGTGAGCTCGATGAGGCTTAGTAGGTCAGCTTCATCGTCCTGTGGATCTTCTTGCGGCCATGGCGGGTGGGGGCCGAGGAGCTACCCGGTGATCGGGTGCCTGGTGGCGTTCTACCGCAACCGGCGGCGGCTGCTGGACTGGTACACGGAGATGCTGGCGGCGTCGCCGTCGCAGACGATCGTCGTTGACCGGCTGGGCGCGCGGCGCACGGTGGTGACGGCGAACCCGGCGAACGTCGAGCACATCCTCCGGGCGAGGTTCGCCAACTACCCCAAGGGGAAGCCGTTCACCGACGTGCTCGGCGACCTGCTCGGCATGGGCATCTTCAACGTCGACGGCGAGCTCTGGCACGCCCAGCGCAAGCTCGTCAGCCACGAGTTCTCCGCGCGCGCGCTCCGGGACCTCGAGGTCACCGTGCTCGAGGCCGAGGCGCGGGACCGCCTCGTCCCGGCGCTCGCCGCGGCGTCGCGCGGCGGCGGGGTGGTGGACATGCAGGACGTGCTCCGGCGGTTCGCGTTCGACGTCATCTGCCGGGTCTCGCTCGGCGTTGACCCGGGATGCCTCGACCCGGCATTGCCGGCGCCGAGGCTGGCCGCGGCGTTCGACACGGCGGCGGGGATCATCGCCCGGCGAGGCGCGGCGCCCGTGGCCGCCGTGTGGAAGGTGAAGCGCGCGCTCGACGCCGGGTCGGAGCGGCGGCTGAGGGAGGAGGTCGGGGTGATCCATGAGGCCGTGATGGGGCTCATCCGGAGCCGGAGGAAGGAGCGCGCGCTCCTCCTGGTCAACGGCAATGGCGTCGGCGGCGGCGGCGGCGCGAGGAGCGACCTGCTGTCGCGGATGATCGAATGCGGGTACCCCGACGAGGCGATCCGCGACATGGTGATCAGCTTCATCATGGCCGGCCGCGACACCACCTCGTCGGCGCTCACCTGGTTCTTCTGGCTCCTCATGCGCCACCGCGGCGTCGAGGCCCAGGTGCTCGACGAGATCGCCGCGACGCGCCGCGCCCGCGGCGCGGGGGAAGAAGGCGGAGACGACGGCGAGGGCGAGGGGCTCGACCTCGACGACTACCGGAGGATGCGCGTCCTCCACGCGGCGCTGTGCGAGACGATGCGGCTGTACCCGCCGGTGGCGTGGGACTCGAAGCATGCGGCGGCGGACGACGTGCTCCCCGACGGCACGGCGGTGGGGCGCGGCGACCGCGTCACCTACTTCCAGTACGGGATGGGGAGGATGGAGGCCATCTGGGGCGCCGACGCCGCCGACTTCAGCCTCGACAGGTGGCTCTCCCTCCCGCGCGGCGGCGGCGACGGCGCCGCCGCCGCCTCGCCAGCCGCCGCTGCGTTCGCCGGCGTGTCGCCGTTCAAGTACCCGGTGTTCCAGGGCGGGCCGAGGACGTGCCTCGGCAAGGAGATGGCGTTCGTCCAGATGAAGTTCGTCGCCAGCGCCGTGCTCCGCCGCTTCGAGCTCCGCCCCGTCGACGAGGGCCGCACGCCGGCGTTCGTGCCGCTCATGACGGCTCACATGGCCGGCGGCCTCAACGTGACGGTGCGGCGGAGAACGCCGGCGCCGGCGACGTCGACGGCGGCCAATGGCACAGGAGGGGAATTGACCAGTAGTTAA
Protein Sequence
- >LOC_Os11g29290.1
MAWFVAAWSCLLVVVMVSSMRLSRSASSSCGSSCGHGGWGPRSYPVIGCLVAFYRNRRRLLDWYTEMLAASPSQTIVVDRLGARRTVVTANPANVEHILRARFANYPKGKPFTDVLGDLLGMGIFNVDGELWHAQRKLVSHEFSARALRDLEVTVLEAEARDRLVPALAAASRGGGVVDMQDVLRRFAFDVICRVSLGVDPGCLDPALPAPRLAAAFDTAAGIIARRGAAPVAAVWKVKRALDAGSERRLREEVGVIHEAVMGLIRSRRKERALLLVNGNGVGGGGGARSDLLSRMIECGYPDEAIRDMVISFIMAGRDTTSSALTWFFWLLMRHRGVEAQVLDEIAATRRARGAGEEGGDDGEGEGLDLDDYRRMRVLHAALCETMRLYPPVAWDSKHAAADDVLPDGTAVGRGDRVTYFQYGMGRMEAIWGADAADFSLDRWLSLPRGGGDGAAAASPAAAAFAGVSPFKYPVFQGGPRTCLGKEMAFVQMKFVASAVLRRFELRPVDEGRTPAFVPLMTAHMAGGLNVTVRRRTPAPATSTAANGTGGELTSS*