Gene Details:
- MSU gene ID: LOC_Os11g14430
- RAPdb gene ID: Os11g0250000
- Gene Symbol: RBS1
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- In this study, we characterized the function of the RNA-binding and SPIN1-interacting 1 (RBS1) protein in flowering time regulation.
- These results suggest that RBS1 is a new negative regulator of flowering time that itself is positively regulated by SPIN1 but negatively regulated by SPL11 in rice.
- RBS1, an RNA Binding Protein, Interacts with SPIN1 and Is Involved in Flowering Time Control in Rice.
- RBS1 overexpression causes delayed flowering under SD and LD conditions in rice.
- Expression analyses of flowering marker genes show that RBS1 overexpression represses the expression of Hd3a under SD and LD conditions.
Function-related keywords:
Literature:
- RBS1, an RNA binding protein, interacts with SPIN1 and is involved in flowering time control in rice . DOI: 10.1371/journal.pone.0087258 ; PMID: 24498057
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os11g14430.1
GACTGATAGCCGATTGGGCTATTTGGGCCGTGATCAGCAGAAGGCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGTGCGTCACCTCCTCGCGTGCTCAGCGCCGCCGCCGTCCAGCTGCTTCTTCCGCCGCATCCTCGCCGCCGGGTTAGGGTTTTGGGGATGTCCGACCGGCAGCAGTCGGAGGAGCCGGAGGAGCAGGTGGACCTGGAGGGGGACGACGACAACGACGTCATGGACGACGACGAGGACGGGTACCGCCGCCGCCGCCGCCGCGAGGACTCCGACGAGCCGGACGACGACGAGGAGGATCCCGAGGTCGAGGGCGATGGCCACGGAGACGCGGGGACCGCGGCGGGCGAAGGAGGAGCGCATGAGATGGACAAGGCCGCCGGCGGCGGCGGCGATGGGCCTGAGGACGATGACGAGAAGCGGAAGTGGGATGAGCTGCTCGCTCTGCCGCCTCAGGGCTCCGAGGTGTTCATCGGCGGTCTCCCCCGCGACACCACCGAGGAGGACCTCCGTGAGCTCTGCGACTCGTTCGGCGAAATCTATGAGGTGAGGTTGATGAAGGATAAAGAGACCAAGGAGAACAAAGGATTCGCATTCGTCAACTTCACCGCGAAGGAAGCGGCTCAGCGTGCTATCGAGGAACTGCATGACAAAGAACACAAGGGGAGGACACTGCGGTGCTCACTGTCGCAGGCAAAGCACAGGCTATTCGTTGGTAATGTACCCAAGGGGTTGGGTGAGGAGGAGCTGAGAAAGATAATCCAAGGGAAGGGGCCAGGTGTTGTCAACATTGAGATGTTCAAGGATTTACATGACCCAAGCCGTAACCGTGGGTTCCTCTTTGTTGAGTATTATAACCACGCTTGTGCAGACTATGCCAGGCAGAAATTGTCAGCACCAAACTTTAAGGTTGATGGTAGCCAATTGACCGTCAGCTGGGCTGAACCTAAGGGTTCATCAGATTCTTCTTCTGCAGCTGCCCAGGTGAAGACTATATATGTGAAGAACTTACCAGAAAATGCTTCTAAAGAGAAGATTAAGGAGATTTTTGAAAAGCATGGAGAGGTCACAAAAGTCGTTTTGCCACCTGCTAAGGATGGGCATAAGAGAGATTTTGGTTTTGTTCACTTTGCTGAAAGATCAAGTGCACTGAAGGCAGTTAAAGGAAGCGAAAAATATGAATTTAATGGGCAAGTGCTGGAAGTATCCATGGCCAAACCTTTGGGTGACAAGAAACCTGATCACTCGTTCAAGCCAGCAGGAGCTCCAAATTTTCCACTTCCTCCTTATGGTGGCTACATGGGAGATCCATATGGTGCTTATGGTGGTGGTGGTCCTGGATTCAACCAGCCTATGATCTATGGTAGAGGACCAGCACCAGCTGGAATGAGGATGGTCCCAATGGTGCTCCCTGACGGTCGTCTTGGATATGTTCTGCAACAGCCTGGTGGAATTCCCCCTCCACCACCAATGCGACGCGGTGACCGGAGGGATGGTGGCAGCCGAGGTGGTGAAGGGAGTCATGGCCGGCGATATCGCCCTTACTAGTTTTTCTTTTTTTTTTCCGTTCCCCTGTGCCGCCAGCCATCATGCAGTGTGATGGATTTGTTAACTTATGAAACAAGAGAGAAGCTTGTATTCCTGTTCCAGCATAACACCTGCAATAGCGTGAGACATGTACCACCTTTTTTTTTCTCCAATTATAGTCGTGTAATGCGGTGCTTGTGAATTGAAAACAGTGTGTTCAAGCTTTGTATTTCTCGCGGCGTCTGTAGCAGTAAACCGATGGAATAATTTATCTGCAGACATCCAGTTGGACCTACATA - >LOC_Os11g14430.2
GACTGATAGCCGATTGGGCTATTTGGGCCGTGATCAGCAGAAGGCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGTGCGTCACCTCCTCGCGTGCTCAGCGCCGCCGCCGTCCAGCTGCTTCTTCCGCCGCATCCTCGCCGCCGGGTTAGGGTTTTGGGGATGTCCGACCGGCAGCAGTCGGAGGAGCCGGAGGAGCAGGTGGACCTGGAGGGGGACGACGACAACGACGTCATGGACGACGACGAGGACGGGTACCGCCGCCGCCGCCGCCGCGAGGACTCCGACGAGCCGGACGACGACGAGGAGGATCCCGAGGTCGAGGGCGATGGCCACGGAGACGCGGGGACCGCGGCGGGCGAAGGAGGAGCGCATGAGATGGACAAGGCCGCCGGCGGCGGCGGCGATGGGCCTGAGGACGATGACGAGAAGCGGAAGTGGGATGAGCTGCTCGCTCTGCCGCCTCAGGGCTCCGAGGTGTTCATCGGCGGTCTCCCCCGCGACACCACCGAGGAGGACCTCCGTGAGCTCTGCGACTCGTTCGGCGAAATCTATGAGGTGAGGTTGATGAAGGATAAAGAGACCAAGGAGAACAAAGGATTCGCATTCGTCAACTTCACCGCGAAGGAAGCGGCTCAGCGTGCTATCGAGGAACTGCATGACAAAGAACACAAGGGGAGGACACTGCGGTGCTCACTGTCGCAGGCAAAGCACAGGCTATTCGTTGGTAATGTACCCAAGGGGTTGGGTGAGGAGGAGCTGAGAAAGATAATCCAAGGGAAGGGGCCAGGTGTTGTCAACATTGAGATGTTCAAGGATTTACATGACCCAAGCCGTAACCGTGGGTTCCTCTTTGTTGAGTATTATAACCACGCTTGTGCAGACTATGCCAGGCAGAAATTGTCAGCACCAAACTTTAAGGTTGATGGTAGCCAATTGACCGTCAGCTGGGCTGAACCTAAGGGTTCATCAGATTCTTCTTCTGCAGCTGCCCAGGTGAAGACTATATATGTGAAGAACTTACCAGAAAATGCTTCTAAAGAGAAGATTAAGGAGATTTTTGAAAAGCATGGAGAGGTCACAAAAGTCGTTTTGCCACCTGCTAAGGATGGGCATAAGAGAGATTTTGGTTTTGTTCACTTTGCTGAAAGATCAAGTGCACTGAAGGCAGTTAAAGGAAGCGAAAAATATGAATTTAATGGGCAAGTGCTGGAAGTATCCATGGCCAAACCTTTGGGTGACAAGAAACCTGATCACTCGTTCAAGCCAGCAGGAGCTCCAAATTTTCCACTTCCTCCTTATGGTGGCTACATGGGAGATCCATATGGTGCTTATGGTGGTGGTGGTCCTGGATTCAACCAGCCTATGATCTATGGTAGAGGACCAGCACCAGCTGGAATGAGGATGGTCCCAATGGTGCTCCCTGACGGTCGTCTTGGATATGTTCTGCAACAGCCTGGTGGAATTCCCCCTCCACCACCAATGCGACGCGGTGACCGGAGGGATGGTGGCAGCCGAGGTGGTGAAGGGAGTCATGGCCGGCGATATCGCCCTTACTAGTTTTTCTTTTTTTTTTCCGTTCCCCTGTGCCGCCAGCCATCATGCAGTGTGATGGATTTGTTAACTTATGAAACAAGAGAGAAGCTTGTATTCCTGTTCCAGCATAACACCTGCAATAGCGTGAGACATGTACCACCTTTTTTTTTCTCCAATTATAGTCGTGTAATGCGGTGCTTGTGAATTGAAAACAGTGTGTTCAAGCTTTGTATTTCTCGCGGCGTCTGTAGCAGTAAACCGATGGAATAATTTATCTGCAGACATCCAGTTGGACCTACATA
CDS Sequence
- >LOC_Os11g14430.1
ATGTCCGACCGGCAGCAGTCGGAGGAGCCGGAGGAGCAGGTGGACCTGGAGGGGGACGACGACAACGACGTCATGGACGACGACGAGGACGGGTACCGCCGCCGCCGCCGCCGCGAGGACTCCGACGAGCCGGACGACGACGAGGAGGATCCCGAGGTCGAGGGCGATGGCCACGGAGACGCGGGGACCGCGGCGGGCGAAGGAGGAGCGCATGAGATGGACAAGGCCGCCGGCGGCGGCGGCGATGGGCCTGAGGACGATGACGAGAAGCGGAAGTGGGATGAGCTGCTCGCTCTGCCGCCTCAGGGCTCCGAGGTGTTCATCGGCGGTCTCCCCCGCGACACCACCGAGGAGGACCTCCGTGAGCTCTGCGACTCGTTCGGCGAAATCTATGAGGTGAGGTTGATGAAGGATAAAGAGACCAAGGAGAACAAAGGATTCGCATTCGTCAACTTCACCGCGAAGGAAGCGGCTCAGCGTGCTATCGAGGAACTGCATGACAAAGAACACAAGGGGAGGACACTGCGGTGCTCACTGTCGCAGGCAAAGCACAGGCTATTCGTTGGTAATGTACCCAAGGGGTTGGGTGAGGAGGAGCTGAGAAAGATAATCCAAGGGAAGGGGCCAGGTGTTGTCAACATTGAGATGTTCAAGGATTTACATGACCCAAGCCGTAACCGTGGGTTCCTCTTTGTTGAGTATTATAACCACGCTTGTGCAGACTATGCCAGGCAGAAATTGTCAGCACCAAACTTTAAGGTTGATGGTAGCCAATTGACCGTCAGCTGGGCTGAACCTAAGGGTTCATCAGATTCTTCTTCTGCAGCTGCCCAGGTGAAGACTATATATGTGAAGAACTTACCAGAAAATGCTTCTAAAGAGAAGATTAAGGAGATTTTTGAAAAGCATGGAGAGGTCACAAAAGTCGTTTTGCCACCTGCTAAGGATGGGCATAAGAGAGATTTTGGTTTTGTTCACTTTGCTGAAAGATCAAGTGCACTGAAGGCAGTTAAAGGAAGCGAAAAATATGAATTTAATGGGCAAGTGCTGGAAGTATCCATGGCCAAACCTTTGGGTGACAAGAAACCTGATCACTCGTTCAAGCCAGCAGGAGCTCCAAATTTTCCACTTCCTCCTTATGGTGGCTACATGGGAGATCCATATGGTGCTTATGGTGGTGGTGGTCCTGGATTCAACCAGCCTATGATCTATGGTAGAGGACCAGCACCAGCTGGAATGAGGATGGTCCCAATGGTGCTCCCTGACGGTCGTCTTGGATATGTTCTGCAACAGCCTGGTGGAATTCCCCCTCCACCACCAATGCGACGCGGTGACCGGAGGGATGGTGGCAGCCGAGGTGGTGAAGGGAGTCATGGCCGGCGATATCGCCCTTACTAG - >LOC_Os11g14430.2
ATGTCCGACCGGCAGCAGTCGGAGGAGCCGGAGGAGCAGGTGGACCTGGAGGGGGACGACGACAACGACGTCATGGACGACGACGAGGACGGGTACCGCCGCCGCCGCCGCCGCGAGGACTCCGACGAGCCGGACGACGACGAGGAGGATCCCGAGGTCGAGGGCGATGGCCACGGAGACGCGGGGACCGCGGCGGGCGAAGGAGGAGCGCATGAGATGGACAAGGCCGCCGGCGGCGGCGGCGATGGGCCTGAGGACGATGACGAGAAGCGGAAGTGGGATGAGCTGCTCGCTCTGCCGCCTCAGGGCTCCGAGGTGTTCATCGGCGGTCTCCCCCGCGACACCACCGAGGAGGACCTCCGTGAGCTCTGCGACTCGTTCGGCGAAATCTATGAGGTGAGGTTGATGAAGGATAAAGAGACCAAGGAGAACAAAGGATTCGCATTCGTCAACTTCACCGCGAAGGAAGCGGCTCAGCGTGCTATCGAGGAACTGCATGACAAAGAACACAAGGGGAGGACACTGCGGTGCTCACTGTCGCAGGCAAAGCACAGGCTATTCGTTGGTAATGTACCCAAGGGGTTGGGTGAGGAGGAGCTGAGAAAGATAATCCAAGGGAAGGGGCCAGGTGTTGTCAACATTGAGATGTTCAAGGATTTACATGACCCAAGCCGTAACCGTGGGTTCCTCTTTGTTGAGTATTATAACCACGCTTGTGCAGACTATGCCAGGCAGAAATTGTCAGCACCAAACTTTAAGGTTGATGGTAGCCAATTGACCGTCAGCTGGGCTGAACCTAAGGGTTCATCAGATTCTTCTTCTGCAGCTGCCCAGGTGAAGACTATATATGTGAAGAACTTACCAGAAAATGCTTCTAAAGAGAAGATTAAGGAGATTTTTGAAAAGCATGGAGAGGTCACAAAAGTCGTTTTGCCACCTGCTAAGGATGGGCATAAGAGAGATTTTGGTTTTGTTCACTTTGCTGAAAGATCAAGTGCACTGAAGGCAGTTAAAGGAAGCGAAAAATATGAATTTAATGGGCAAGTGCTGGAAGTATCCATGGCCAAACCTTTGGGTGACAAGAAACCTGATCACTCGTTCAAGCCAGCAGGAGCTCCAAATTTTCCACTTCCTCCTTATGGTGGCTACATGGGAGATCCATATGGTGCTTATGGTGGTGGTGGTCCTGGATTCAACCAGCCTATGATCTATGGTAGAGGACCAGCACCAGCTGGAATGAGGATGGTCCCAATGGTGCTCCCTGACGGTCGTCTTGGATATGTTCTGCAACAGCCTGGTGGAATTCCCCCTCCACCACCAATGCGACGCGGTGACCGGAGGGATGGTGGCAGCCGAGGTGGTGAAGGGAGTCATGGCCGGCGATATCGCCCTTACTAG
Protein Sequence
- >LOC_Os11g14430.1
MSDRQQSEEPEEQVDLEGDDDNDVMDDDEDGYRRRRRREDSDEPDDDEEDPEVEGDGHGDAGTAAGEGGAHEMDKAAGGGGDGPEDDDEKRKWDELLALPPQGSEVFIGGLPRDTTEEDLRELCDSFGEIYEVRLMKDKETKENKGFAFVNFTAKEAAQRAIEELHDKEHKGRTLRCSLSQAKHRLFVGNVPKGLGEEELRKIIQGKGPGVVNIEMFKDLHDPSRNRGFLFVEYYNHACADYARQKLSAPNFKVDGSQLTVSWAEPKGSSDSSSAAAQVKTIYVKNLPENASKEKIKEIFEKHGEVTKVVLPPAKDGHKRDFGFVHFAERSSALKAVKGSEKYEFNGQVLEVSMAKPLGDKKPDHSFKPAGAPNFPLPPYGGYMGDPYGAYGGGGPGFNQPMIYGRGPAPAGMRMVPMVLPDGRLGYVLQQPGGIPPPPPMRRGDRRDGGSRGGEGSHGRRYRPY* - >LOC_Os11g14430.2
MSDRQQSEEPEEQVDLEGDDDNDVMDDDEDGYRRRRRREDSDEPDDDEEDPEVEGDGHGDAGTAAGEGGAHEMDKAAGGGGDGPEDDDEKRKWDELLALPPQGSEVFIGGLPRDTTEEDLRELCDSFGEIYEVRLMKDKETKENKGFAFVNFTAKEAAQRAIEELHDKEHKGRTLRCSLSQAKHRLFVGNVPKGLGEEELRKIIQGKGPGVVNIEMFKDLHDPSRNRGFLFVEYYNHACADYARQKLSAPNFKVDGSQLTVSWAEPKGSSDSSSAAAQVKTIYVKNLPENASKEKIKEIFEKHGEVTKVVLPPAKDGHKRDFGFVHFAERSSALKAVKGSEKYEFNGQVLEVSMAKPLGDKKPDHSFKPAGAPNFPLPPYGGYMGDPYGAYGGGGPGFNQPMIYGRGPAPAGMRMVPMVLPDGRLGYVLQQPGGIPPPPPMRRGDRRDGGSRGGEGSHGRRYRPY*