Gene Details:
- MSU gene ID: LOC_Os11g10740
- RAPdb gene ID: Os11g0213500
- Gene Symbol: Os_SMK1 Os_Smk1 SMK1
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- This result indicates that the loss of Os_SMK1 function in rice causes a chalky and shrunken seed phenotype, similar to the small kernel phenotype in smk1 mutants in maize.
- The mutant phenotypic analysis indicates that Os_SMK1 is required for seed development in rice.
Function-related keywords:
Literature:
- Small kernel 1 encodes a pentatricopeptide repeat protein required for mitochondrial nad7 transcript editing and seed development in maize (Zea mays) and rice (Oryza sativa) . DOI: 10.1111/tpj.12584 ; PMID: 24923534
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os11g10740.1
ATGGCGGCGCCCGTGGCCGGCCGCCTCTCCGGGCTCCTCCGGCGATGCGCGGCGGCCGGGGCGGTCCGGCCGGGAGAGCAGGCGCACGCGAGGGCGGTGGTGGGCGGGTGGCTCCCCGACGCCACCCTGGAGACCGACCTCGTGCTGATGTACTGCAGGTGCGGCGAGCGTCGGCGCGCACGCAGGGTGTTCGACGGAATGCGTGCGCCGTCCATGCACGCGTACAACGTGCTCCTCGCGGCGTCGCCTCCCCGCGACGCGATGGAGGTGTTCTCCCGCCTCCTCGCGTCGGGGCTCCGCCCTGACGGTTACTCTGTCCCCGCCGTGGTACGTGCCTGCGCTGAGCTCCCCGACGCGGTGCTTGGCGGGGTGATCCACGGCTTCGCCGTCCGGCTCGGCTTGATGGGGAACGTTGTTGTGGCCGCTGCGCTTCTGGATATGTATGCCAAGGCTGGTTTCCTGGATGATGCGGTGAGGGTGTTCGACGAGATGACGGAGAGGGATGCTGTCGTCTGGAACTGCATGGTTGCAGGGTATGCGAGGGCTGGGAGGGCAGTAGAAACCTTTGAGATTTTCAGCAGAGCGCAGGTTGAGGCGGTGAACATGGTGAATGGTCTGCAGGCTGTGCCCAGCGTGTTGAATATCTGCGCGAAGGAAGGGGAGCTGATGAAGGGTAGGGAAATCCATGGTAGGATGGTGAGGTGCCTTGCATTTGATTCGGATATCGCAGTGGGGAACGCTTTGATCAACATGTATGCAAAGTGCGGCCGGGTCAATGTATCACAAGCAGTGTTTTCTGGCATGCAGCAGAGGGATGTGGTGAGCTGGTCTACAATGATTCATAGCTACAGCATTCATGGCAAGGGGGAACAGGCATTGAAGGTTTACATGGAAATGTTGTCTGAGGGAGTGAAACCAAATTGGATCACATTCACATCAGTTCTGTCAAGTTGCAGCCACTCCGGGCTTGTAACCGAGGGTCGGAAGATCTTCGAGTCGATGACTAAGGTTCATGGTGTCCACCCTGCTGCTGAGCACTATGCATGTATGGTTGACCTCTTAGGGCGTGCTGGAGCCATTGAAGAAGCTGTTGGGCTTATAAGGAAGATGCCCATGGAACCTTGTGCTAGCGTGTGGGGAGCTTTGCTCTCTGCATGTGCTATGCATAATAACGTCGATGTTGGAGAGATTGCAGCTTTTAGGCTATTTGAGTTAGAAGAAGGCAGTGCTAGCAATTATGTTACCCTCTGTGGAATTTATGACGCAGTTGGTCAATCTGATGGTGTTGCAGGGTTGAGATCAAGGATGAGAGAACTCGGCATGGTGAAGACGCCTGGGTGCAGTCGGATCGATGTGAAGGGAAGAGCTCATGCTTTCTACCAGGGGAGCATCCCACGTTATTTGAGGAGATGA
CDS Sequence
- >LOC_Os11g10740.1
ATGGCGGCGCCCGTGGCCGGCCGCCTCTCCGGGCTCCTCCGGCGATGCGCGGCGGCCGGGGCGGTCCGGCCGGGAGAGCAGGCGCACGCGAGGGCGGTGGTGGGCGGGTGGCTCCCCGACGCCACCCTGGAGACCGACCTCGTGCTGATGTACTGCAGGTGCGGCGAGCGTCGGCGCGCACGCAGGGTGTTCGACGGAATGCGTGCGCCGTCCATGCACGCGTACAACGTGCTCCTCGCGGCGTCGCCTCCCCGCGACGCGATGGAGGTGTTCTCCCGCCTCCTCGCGTCGGGGCTCCGCCCTGACGGTTACTCTGTCCCCGCCGTGGTACGTGCCTGCGCTGAGCTCCCCGACGCGGTGCTTGGCGGGGTGATCCACGGCTTCGCCGTCCGGCTCGGCTTGATGGGGAACGTTGTTGTGGCCGCTGCGCTTCTGGATATGTATGCCAAGGCTGGTTTCCTGGATGATGCGGTGAGGGTGTTCGACGAGATGACGGAGAGGGATGCTGTCGTCTGGAACTGCATGGTTGCAGGGTATGCGAGGGCTGGGAGGGCAGTAGAAACCTTTGAGATTTTCAGCAGAGCGCAGGTTGAGGCGGTGAACATGGTGAATGGTCTGCAGGCTGTGCCCAGCGTGTTGAATATCTGCGCGAAGGAAGGGGAGCTGATGAAGGGTAGGGAAATCCATGGTAGGATGGTGAGGTGCCTTGCATTTGATTCGGATATCGCAGTGGGGAACGCTTTGATCAACATGTATGCAAAGTGCGGCCGGGTCAATGTATCACAAGCAGTGTTTTCTGGCATGCAGCAGAGGGATGTGGTGAGCTGGTCTACAATGATTCATAGCTACAGCATTCATGGCAAGGGGGAACAGGCATTGAAGGTTTACATGGAAATGTTGTCTGAGGGAGTGAAACCAAATTGGATCACATTCACATCAGTTCTGTCAAGTTGCAGCCACTCCGGGCTTGTAACCGAGGGTCGGAAGATCTTCGAGTCGATGACTAAGGTTCATGGTGTCCACCCTGCTGCTGAGCACTATGCATGTATGGTTGACCTCTTAGGGCGTGCTGGAGCCATTGAAGAAGCTGTTGGGCTTATAAGGAAGATGCCCATGGAACCTTGTGCTAGCGTGTGGGGAGCTTTGCTCTCTGCATGTGCTATGCATAATAACGTCGATGTTGGAGAGATTGCAGCTTTTAGGCTATTTGAGTTAGAAGAAGGCAGTGCTAGCAATTATGTTACCCTCTGTGGAATTTATGACGCAGTTGGTCAATCTGATGGTGTTGCAGGGTTGAGATCAAGGATGAGAGAACTCGGCATGGTGAAGACGCCTGGGTGCAGTCGGATCGATGTGAAGGGAAGAGCTCATGCTTTCTACCAGGGGAGCATCCCACGTTATTTGAGGAGATGA
Protein Sequence
- >LOC_Os11g10740.1
MAAPVAGRLSGLLRRCAAAGAVRPGEQAHARAVVGGWLPDATLETDLVLMYCRCGERRRARRVFDGMRAPSMHAYNVLLAASPPRDAMEVFSRLLASGLRPDGYSVPAVVRACAELPDAVLGGVIHGFAVRLGLMGNVVVAAALLDMYAKAGFLDDAVRVFDEMTERDAVVWNCMVAGYARAGRAVETFEIFSRAQVEAVNMVNGLQAVPSVLNICAKEGELMKGREIHGRMVRCLAFDSDIAVGNALINMYAKCGRVNVSQAVFSGMQQRDVVSWSTMIHSYSIHGKGEQALKVYMEMLSEGVKPNWITFTSVLSSCSHSGLVTEGRKIFESMTKVHGVHPAAEHYACMVDLLGRAGAIEEAVGLIRKMPMEPCASVWGALLSACAMHNNVDVGEIAAFRLFELEEGSASNYVTLCGIYDAVGQSDGVAGLRSRMRELGMVKTPGCSRIDVKGRAHAFYQGSIPRYLRR*