Gene Details:
- MSU gene ID: LOC_Os11g07240
- RAPdb gene ID: Os11g0173550
- Gene Symbol: Hwi1
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- The dominant Hybrid weakness i1 (Hwi1) gene from wild rice is genetically incompatible with Teqing and induced a set of weakness symptoms, including growth suppression, yield decrease, impaired nutrient absorption, and the retardation of crown root initiation.
Function-related keywords:
- crown , root , crown-root , yield , growth
Literature:
- Genetic and physiological analysis of a novel type of interspecific hybrid weakness in rice . DOI: 10.1093/mp/sss146 ; PMID: 23220941
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os11g07240.1
ATGAAAGCTCCTTCAGTTGGAGAGCTTCTCTTGGTGTTCATAGCCTGCTCTTGCTGTGCACATGTCGTCTGCAGCTCGTTGCCTGGAAATGAGACAGACAGACTGTCACTGCTTGAGTTCAAGAAGGCGATCAGTGGCAATATCTCTCCATCAATTGCCAACCTGACATTCCTAAAGTCTCTTTCTCTGGGTAAAAATTCATTCTTTGGAGAAATCCCTGCATCACTTGGCCACCTGCATCGCCTACAAACTCTTGTTTTGAGTTACAACAAATTGCAAGGGAGGATACCTGATCTGGCAAACTGTTCTAACCTCAGGTCCCTATGGCTTGATCGCAATAATCTTGTCGGAAAAATTCCAAATTTGCCGCCTCGGCTTCAAGAGCTTATGCTTCATGTTAACAACCTGAGTGGAACTATCCCTCCTTCTTTGGGCAATATCACAACGCTAACTAAGTTTGGTTGTGCATTTAACAATATTGAGGGTAACATCCCAACTGAATTTGAAAGGTTGCCTGGGCTTCAGTATTTATCAGTCAATACCAATAAGTTGGCAGGTTGGTTTCAACTAGCCATCCTAAATATTTCCACTCTTGTTACTCTTGATCTTGGTGCGAATAATCTACGGGGGGAGGTACCATCTAATCTTGGAAACTCTTTGCCCAACCTCCAGTATCTCATATTGTCAGACAACTTCTTTCATGGGCATTTCCCTTCTTCATTGATAAATTCTTCCAAGCTGAACCTTATTGACATGGCAGAGAATAATTTCACTGGGGTGATCCCTAGCTCCATTGGAAAGCTTGCAAAACTCAACGTTTTGAGTCTTCAGTTGAATCAATTTCAAGCTGGCACCAAGAAAGAGTGGGAGTTCATGGATAGCCTGGCCAATTGTACTGAGCTAGAAGTTTTCTCCGTAGCGAGAAATCATTTACAAGGCCAAGTACCAAGCTCACTAAGTAATATTTCTTCTCAGCTTCAGTATCTATATTTAGGGAAAAATCAACTATCTGGAGGTTTTCCTTCTGGAATAGCAAAATTCCACAACCTAATTATTTTAGGATTGGATCACAATCAATTTACAGGTGTTGTTCCAGAGTGGCTTGGAACTCTTCAAGCATTACAAAAATTAAGCTTGCTTGACAACAACTTCATAGGGTTTCTTCCAACCTCCCTTTCAAATTTGTCTCAATTGAGTGAACTCTTTTTGGGCTCTAACAAATTTGACGGGAACATACCACTAGGCTTGGGTGACCTCCAAATGCTTCAAGTATTGAGTATTTCCAACAACAATATTCAAGGTAGGAGCTTTCCTCCAATAAGTTATTTTGGTGATATACCAAATACTTTGAGCAATTGTGAAAGTCTAGAAGACATCAGGTTGGATAGAAATGCTTTTACTGGAATCATCCCTACTTCATTAGGCAACATAAGAAGCTTAAAAGTTCTCAACTTGTCTCACAATAAATTAACTGGATCAATACCAGTATCGCTTGGCAACCTACAGCTTCTTGAGCAACTTGATTTGTCATTCAACCATCTTAAGGGCAAGGTCCCGACAAATGGTGTTTTCATGAATGAAACTGCCATACAGATTGATGGAAAATCATGGGCTCTGTGGAGGAGAAAACATGAAGGGAATAGCACATCTTTGCCTTCGTTTGGTAGAAAGTTTCCAAAAGTTCCCTACAATGAGCTTGCTGAGGCAACTGAAGGGTTCTCCGAGTCCAATTTAATTGGCAAAGGAAGATATGGTTATGTTTATCGAGGAAACCTGTTTCAAGGCACAAATGTAGTTGCGATCAAAGTTTTCAATCTAGAGACAATGGGGGCACAAAAGAGCTTCATCGCAGAATGTAATGCTTTGAGAAATGTGCGACATCGTAATCTAGTTCCAATTCTAACTGCTTGCTCAAGCATTGATCCCAATGGAAATGATTTCAAAGCTTTGGTCTATGAGTTCATGCCAATGGGAGACTTGTATAACCTACTATACGCACCTCAATGTGATTCAAATTTGAGACACATTACACTAGCTCAAAGGATTGGAATAGTGGCAGATGTAGCAGACGCGATGGACTACCTCCACCATAACAACCAAGGTACTATTGTTCATTGTGATTTGAAGCCAAGCAAAATTCTTCTCGATGATAATATGACGGCTCATGTTGGAGACTTCGGCCTGGTAAGATTCAATTTTGGTTCCACAACAGCATCTCTCGGAGACACGAACTCAACTTCTTCTGCTGCGATAAAGGGAACAATTGGATATATTGCTCCAGAATGTGCAGGGGGTGGCCAGGTTTCAACTGCTGCAGATGTCTATAGCTTTGGAGTTGTTCTCCTCGAGATATTCATAAGGAGGAGGCCAACAGATGACATGTTCAAGGATGGATTGACCATTGCAAAGTTCACAGAGATCAACATCCCTGATAAGATGCAGGATATTGTTGATCCTCAGCTGGCTCAAGAGCTGGGTCTATGCGAAGAAGCTCCAATGGCTGATGAAGAAAGTGGAGCGCGTTGCCTGCTTTCTGTGCTTAATATTGGACTATGTTGCACTCGATTGGCACCAAACGAGCGCATCAGTATGAAGGAGGTGGCTTCCAAGATGCATGGAATCAGAGGTGCATATCTCAGATGA
CDS Sequence
- >LOC_Os11g07240.1
ATGAAAGCTCCTTCAGTTGGAGAGCTTCTCTTGGTGTTCATAGCCTGCTCTTGCTGTGCACATGTCGTCTGCAGCTCGTTGCCTGGAAATGAGACAGACAGACTGTCACTGCTTGAGTTCAAGAAGGCGATCAGTGGCAATATCTCTCCATCAATTGCCAACCTGACATTCCTAAAGTCTCTTTCTCTGGGTAAAAATTCATTCTTTGGAGAAATCCCTGCATCACTTGGCCACCTGCATCGCCTACAAACTCTTGTTTTGAGTTACAACAAATTGCAAGGGAGGATACCTGATCTGGCAAACTGTTCTAACCTCAGGTCCCTATGGCTTGATCGCAATAATCTTGTCGGAAAAATTCCAAATTTGCCGCCTCGGCTTCAAGAGCTTATGCTTCATGTTAACAACCTGAGTGGAACTATCCCTCCTTCTTTGGGCAATATCACAACGCTAACTAAGTTTGGTTGTGCATTTAACAATATTGAGGGTAACATCCCAACTGAATTTGAAAGGTTGCCTGGGCTTCAGTATTTATCAGTCAATACCAATAAGTTGGCAGGTTGGTTTCAACTAGCCATCCTAAATATTTCCACTCTTGTTACTCTTGATCTTGGTGCGAATAATCTACGGGGGGAGGTACCATCTAATCTTGGAAACTCTTTGCCCAACCTCCAGTATCTCATATTGTCAGACAACTTCTTTCATGGGCATTTCCCTTCTTCATTGATAAATTCTTCCAAGCTGAACCTTATTGACATGGCAGAGAATAATTTCACTGGGGTGATCCCTAGCTCCATTGGAAAGCTTGCAAAACTCAACGTTTTGAGTCTTCAGTTGAATCAATTTCAAGCTGGCACCAAGAAAGAGTGGGAGTTCATGGATAGCCTGGCCAATTGTACTGAGCTAGAAGTTTTCTCCGTAGCGAGAAATCATTTACAAGGCCAAGTACCAAGCTCACTAAGTAATATTTCTTCTCAGCTTCAGTATCTATATTTAGGGAAAAATCAACTATCTGGAGGTTTTCCTTCTGGAATAGCAAAATTCCACAACCTAATTATTTTAGGATTGGATCACAATCAATTTACAGGTGTTGTTCCAGAGTGGCTTGGAACTCTTCAAGCATTACAAAAATTAAGCTTGCTTGACAACAACTTCATAGGGTTTCTTCCAACCTCCCTTTCAAATTTGTCTCAATTGAGTGAACTCTTTTTGGGCTCTAACAAATTTGACGGGAACATACCACTAGGCTTGGGTGACCTCCAAATGCTTCAAGTATTGAGTATTTCCAACAACAATATTCAAGGTAGGAGCTTTCCTCCAATAAGTTATTTTGGTGATATACCAAATACTTTGAGCAATTGTGAAAGTCTAGAAGACATCAGGTTGGATAGAAATGCTTTTACTGGAATCATCCCTACTTCATTAGGCAACATAAGAAGCTTAAAAGTTCTCAACTTGTCTCACAATAAATTAACTGGATCAATACCAGTATCGCTTGGCAACCTACAGCTTCTTGAGCAACTTGATTTGTCATTCAACCATCTTAAGGGCAAGGTCCCGACAAATGGTGTTTTCATGAATGAAACTGCCATACAGATTGATGGAAAATCATGGGCTCTGTGGAGGAGAAAACATGAAGGGAATAGCACATCTTTGCCTTCGTTTGGTAGAAAGTTTCCAAAAGTTCCCTACAATGAGCTTGCTGAGGCAACTGAAGGGTTCTCCGAGTCCAATTTAATTGGCAAAGGAAGATATGGTTATGTTTATCGAGGAAACCTGTTTCAAGGCACAAATGTAGTTGCGATCAAAGTTTTCAATCTAGAGACAATGGGGGCACAAAAGAGCTTCATCGCAGAATGTAATGCTTTGAGAAATGTGCGACATCGTAATCTAGTTCCAATTCTAACTGCTTGCTCAAGCATTGATCCCAATGGAAATGATTTCAAAGCTTTGGTCTATGAGTTCATGCCAATGGGAGACTTGTATAACCTACTATACGCACCTCAATGTGATTCAAATTTGAGACACATTACACTAGCTCAAAGGATTGGAATAGTGGCAGATGTAGCAGACGCGATGGACTACCTCCACCATAACAACCAAGGTACTATTGTTCATTGTGATTTGAAGCCAAGCAAAATTCTTCTCGATGATAATATGACGGCTCATGTTGGAGACTTCGGCCTGGTAAGATTCAATTTTGGTTCCACAACAGCATCTCTCGGAGACACGAACTCAACTTCTTCTGCTGCGATAAAGGGAACAATTGGATATATTGCTCCAGAATGTGCAGGGGGTGGCCAGGTTTCAACTGCTGCAGATGTCTATAGCTTTGGAGTTGTTCTCCTCGAGATATTCATAAGGAGGAGGCCAACAGATGACATGTTCAAGGATGGATTGACCATTGCAAAGTTCACAGAGATCAACATCCCTGATAAGATGCAGGATATTGTTGATCCTCAGCTGGCTCAAGAGCTGGGTCTATGCGAAGAAGCTCCAATGGCTGATGAAGAAAGTGGAGCGCGTTGCCTGCTTTCTGTGCTTAATATTGGACTATGTTGCACTCGATTGGCACCAAACGAGCGCATCAGTATGAAGGAGGTGGCTTCCAAGATGCATGGAATCAGAGGTGCATATCTCAGATGA
Protein Sequence
- >LOC_Os11g07240.1
MKAPSVGELLLVFIACSCCAHVVCSSLPGNETDRLSLLEFKKAISGNISPSIANLTFLKSLSLGKNSFFGEIPASLGHLHRLQTLVLSYNKLQGRIPDLANCSNLRSLWLDRNNLVGKIPNLPPRLQELMLHVNNLSGTIPPSLGNITTLTKFGCAFNNIEGNIPTEFERLPGLQYLSVNTNKLAGWFQLAILNISTLVTLDLGANNLRGEVPSNLGNSLPNLQYLILSDNFFHGHFPSSLINSSKLNLIDMAENNFTGVIPSSIGKLAKLNVLSLQLNQFQAGTKKEWEFMDSLANCTELEVFSVARNHLQGQVPSSLSNISSQLQYLYLGKNQLSGGFPSGIAKFHNLIILGLDHNQFTGVVPEWLGTLQALQKLSLLDNNFIGFLPTSLSNLSQLSELFLGSNKFDGNIPLGLGDLQMLQVLSISNNNIQGRSFPPISYFGDIPNTLSNCESLEDIRLDRNAFTGIIPTSLGNIRSLKVLNLSHNKLTGSIPVSLGNLQLLEQLDLSFNHLKGKVPTNGVFMNETAIQIDGKSWALWRRKHEGNSTSLPSFGRKFPKVPYNELAEATEGFSESNLIGKGRYGYVYRGNLFQGTNVVAIKVFNLETMGAQKSFIAECNALRNVRHRNLVPILTACSSIDPNGNDFKALVYEFMPMGDLYNLLYAPQCDSNLRHITLAQRIGIVADVADAMDYLHHNNQGTIVHCDLKPSKILLDDNMTAHVGDFGLVRFNFGSTTASLGDTNSTSSAAIKGTIGYIAPECAGGGQVSTAADVYSFGVVLLEIFIRRRPTDDMFKDGLTIAKFTEINIPDKMQDIVDPQLAQELGLCEEAPMADEESGARCLLSVLNIGLCCTRLAPNERISMKEVASKMHGIRGAYLR*