Gene Details:
- MSU gene ID: LOC_Os11g05570
- RAPdb gene ID: Os11g0153900
- Gene Symbol: LS1
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- DNA damage caused by HLHT stress induces ROS accumulation, which causes the injury and apoptosis of leaf cells in the LS1 mutant.
- <U+2022> We characterized and cloned LS1 by map-based cloning and genetic complementation.
- TUNEL and comet assays indicated that mutation of LS1 led to severe DNA damage under HLHT stress.
- Furthermore, we found excessive reactive oxygen species (ROS) accumulation in the LS1 mutant under HLHT stress.
Function-related keywords:
Literature:
- DNA damage and reactive oxygen species cause cell death in the rice local lesions 1 mutant under high light and high temperature . DOI: 10.1111/nph.15597 ; PMID: 30449034
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os11g05570.1
CTCGCCCCGCCCCGCCCGCCGCTCTCCTCCGCGCCGCCGCCCGCCGCCGTCTACTCCTCTCCCGCGCCGCCGGCCGCCGTGTTCCATCCTTTCCCCGGCGCCACAAGCTTCCGGCCCCTAGATAGCCCGCGAAGCCAAGCTGCCGGCCCCTCGCTCGCCCGCGCAGACGGCCGAGATGGTGGCAGCGGTGGCGCCGGAGTGGGCCACCAAGGAGCCCTGCCTCATGGGAATCGACGAGGCTGGGCGCGGCCCCGTTCTCGGTCCAATGGTGTATGGCTGCATGTACTGCGCTCGTTCCTACCAAGACACTCTTGCAACCCTTAAATTTGCAGATTCGAAGACCTTGAAGGAAGAACAAAGGGAGGAGCTGTTTGAAAGTCTAAAAGACAATAGTTCAATTGGGTGGGAAGTGGATGTCATATGCCCAAAGGAGCTATCTGCTAAAATGTTAAAAAGATCGAAAGTTAACCTGAATGAAATATCTCATAACTCTGCAATGGGTCTGGTCAAAAGAGCTCTTGACATGGGAGTTCTACTAGCAGAGGTCTACATTGATACGGTTGGAGATGCGGAGAAGTACAGGATCAAATTGACTGAAAAGTTCCCAGGCATCAAATTTGTGGTTGCCAAGAAGGCTGATAGCCTTTTCCCAGTTGTTAGTGGAGCAAGTATAGTTTCGAAGGTTACCAGAGACAGAGCCTTGAGAAACTGGGTATTTGATGAAACGGCTCAGAATATGCACATGAACACTGGGTCTGGTTATCCAGGAGATCCTTCCACTAAACAATGGTTAGAAGATCACAAACATCCGATATTTGGATTCCCGTCTTTGGTTCGTTTTAGCTGGGGAACTTGCACGCCCTTCTTCAATGACGCAATTGAAGTTACCTGGGAGTCCAATGAACTTGAAGAAGATGCAGGTAGCAACGGTAGTGTTAAGAGACAGGTCAAGCTATCAAGCTTAGGCTTTACTGGATTCAAAAGGAAGTCTGAGGAGATCGACTCAAGTGGGAAAGGCCGTTGCAAGTTCTTCCAGGCTCGCAAACTTGAACTTGTCAGGAAGTTTCAGTGATGCGTATCAGCTTCGTTGTCTGTACTACTAACTTTAAGTCAGAGTAGAAGGCTCTTATGGGGTTATGGCTTGTATTTCAGCTGTGACACTTGTGAGTTCAGTATAATGAAGGCTCTTATGGTGATATTGTATTTCAGCTATGAACTTGTGGGTTCAGTAAAATTCTGAATCGAGCATTTGAAGTGTTTTTCAGACATTTATTTGAACTGCTCCAAAGTTAATAGAATTATGTTAGATTGATTCTA
CDS Sequence
- >LOC_Os11g05570.1
ATGGTGGCAGCGGTGGCGCCGGAGTGGGCCACCAAGGAGCCCTGCCTCATGGGAATCGACGAGGCTGGGCGCGGCCCCGTTCTCGGTCCAATGGTGTATGGCTGCATGTACTGCGCTCGTTCCTACCAAGACACTCTTGCAACCCTTAAATTTGCAGATTCGAAGACCTTGAAGGAAGAACAAAGGGAGGAGCTGTTTGAAAGTCTAAAAGACAATAGTTCAATTGGGTGGGAAGTGGATGTCATATGCCCAAAGGAGCTATCTGCTAAAATGTTAAAAAGATCGAAAGTTAACCTGAATGAAATATCTCATAACTCTGCAATGGGTCTGGTCAAAAGAGCTCTTGACATGGGAGTTCTACTAGCAGAGGTCTACATTGATACGGTTGGAGATGCGGAGAAGTACAGGATCAAATTGACTGAAAAGTTCCCAGGCATCAAATTTGTGGTTGCCAAGAAGGCTGATAGCCTTTTCCCAGTTGTTAGTGGAGCAAGTATAGTTTCGAAGGTTACCAGAGACAGAGCCTTGAGAAACTGGGTATTTGATGAAACGGCTCAGAATATGCACATGAACACTGGGTCTGGTTATCCAGGAGATCCTTCCACTAAACAATGGTTAGAAGATCACAAACATCCGATATTTGGATTCCCGTCTTTGGTTCGTTTTAGCTGGGGAACTTGCACGCCCTTCTTCAATGACGCAATTGAAGTTACCTGGGAGTCCAATGAACTTGAAGAAGATGCAGGTAGCAACGGTAGTGTTAAGAGACAGGTCAAGCTATCAAGCTTAGGCTTTACTGGATTCAAAAGGAAGTCTGAGGAGATCGACTCAAGTGGGAAAGGCCGTTGCAAGTTCTTCCAGGCTCGCAAACTTGAACTTGTCAGGAAGTTTCAGTGA
Protein Sequence
- >LOC_Os11g05570.1
MVAAVAPEWATKEPCLMGIDEAGRGPVLGPMVYGCMYCARSYQDTLATLKFADSKTLKEEQREELFESLKDNSSIGWEVDVICPKELSAKMLKRSKVNLNEISHNSAMGLVKRALDMGVLLAEVYIDTVGDAEKYRIKLTEKFPGIKFVVAKKADSLFPVVSGASIVSKVTRDRALRNWVFDETAQNMHMNTGSGYPGDPSTKQWLEDHKHPIFGFPSLVRFSWGTCTPFFNDAIEVTWESNELEEDAGSNGSVKRQVKLSSLGFTGFKRKSEEIDSSGKGRCKFFQARKLELVRKFQ*