Information report for OscpSRP54b
Gene Details
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Functional Descriptions
- Knockout lines of OscpSRP54b (LOC_Os11g05556) exhibited similar pale green phenotype to pgl14 with reduced chlorophyll contents and impaired chloroplast development, but showed apparently arrested-growth and died within 3 weeks.
- Conclusion: Our study demonstrated that both OscpSRP54a and OscpSRP54b were essential for normal chloroplast development by interacting with OscpSRP43 in rice.
- OscpSRP54a and OscpSRP54b might play distinct roles in transporting different chloroplast proteins into thylakoids through cpSRP-mediated pathway.
- Both OscpSRP54a and OscpSRP54b were constitutively expressed mainly in shoots and leaves at the vegetative growth stage.
Functional Keywords
Literature and News
Gene Resources
- UniProt: H2KVZ4
- EMBL: DP000010
- AlphaFoldDB: H2KVZ4
- InterPro: IPR000897, IPR003593, IPR004125
- PANTHER: PTHR11564, PTHR11564:SF32
- SUPFAM: SSF47446, SSF52540
- PROSITE: PS00300
- Gene3D: 1.10.260.30, 1.20.120.140, 3.40.50.300
- Conserved Domain Database: cd18539
Sequences
cDNA Sequence
- >LOC_Os11g05556.2
ACGCCACCAAAAATGGAGGCCACCAGTAGTACTACACTAGCGCTCTCCTCGCCGCCCACCGCCGCCGCCCGCCGCTCGCCGGCGAAGGCGATCGTCGCCTCCCACCACCTGCGCCACTCCTCCGTCCCCGCCCTTCACCTCCGCGCGGTCCCCGGCCCCTCCTTCCGCGCCCTCCCCTCACCCGGCTTCCCGGTCCCTCCCAACTGCTAGTTTCTTGGTTTCTTCAATTCTTCCGCCCCGGAGAAATTTCGCTTTTGCTGATTTGTCTTGGATGCGTTCAGGGATGGAGGAGGAAGAGGGGAAGCGGGCTGGTTGTGCGGGCAGAGATGTTTGGGCAGCTCACGACCGGGCTGGAGTCCGCGTGGAACAAGCTGCGGGGAACAGATCAACTGACGAAGGACAACATCGCTGAACCAATGCGGGATATCAGAAGAGCACTTTTGGAGGCAGATGTGAGTTTGCCGGTAGTGAGAAGTTTTATTGAGTCCGTTACTGAAAAAGCTGTAGGCACTGATGTGATTCGAGGTGTCAAGCCTGAGCAACAGCTGGTGAAGGTTGTGAATGATGAACTTGTACAGTTGATGGGTGGGGAGGTATCAGATTTGGTGTTTGCAAAAACTGCCCCAACAGTTATCCTATTGGCGGGTCTACAAGGTGTTGGGAAAACTACTGTTTGTGCAAAGCTTGCCTATTATCTAAAGAAAATGGGGAAGAGTTGCATGCTGATTGCTGCGGATGTCTACAGGCCTGCTGCCATTGATCAACTCACTATTCTGGGGAAACAGGTTGGGGTTCCAGTTTACTCTGAAGGAACTGAAGCTAAACCTTCACAAATTGCCAAGAATGGCATAAAGGAGGCAAAAAGCAAGAAAACTGACGTAATCATAGTGGATACTGCTGGAAGGCTGCAGGTAGATAAAGCCATGATGAGTGAGTTGAAAGAGGTAAAAAGGGCAGTAAATCCTACAGAAGTTCTACTTGTGGTGGATGCCATGACTGGACAAGAAGCTGCATCATTGGTTAGCACCTTCAATGTTGAGATTGGTATTACTGGTGCTATACTGACAAAACTGGATGGTGATTCCAGAGGTGGAGCAGCACTAAGTATCAAAGAGGTATCTGGAAAGCCCATCAAGTTTGTAGGGCGAGGAGAACGCATGGAAGATCTTGAGCCTTTCTATCCTGATCGTATGGCACAACGAATCTTGGGAATGGGAGATGTACTTTCATTTGTTGAAAAGGCACAGGAAGTGATGCGTCAAGAAGATGCTGAGGAATTACAGAAGAAGATCCTGAGTGCAAAATTTAACTTCAATGACTTCTTGAAGCAAACACAAGCTATCGCACAAATGGGTTCATTTAGTCGTATAATTGGCATGATTCCAGGCATGAACAAGGTTACCCCTGCTCAAATTCGTGAAGCGGAGAAAAACCTTAAATTTATGGAGTCCATGATCAACGTAATGACCCCTGAGGAAAGGGAAAGACCAGAGCTACTTGCTGAATCACGCGAGAGGAGGATAAGAGTGGCCAAGGAATCCGGAAAAAACGAACGACAGGTGAGCCAATTGGTTGCGCAGCTCTTCCGAATGCGTGCTCAAATGCAGAAAATGATGGGTGCTATGCAAGGGCAAGACACCCCTGATATGGAAGGCCTCATGGATTCCATCAAGGCAGAAGAGCAGGCTGCCGCTGGTACTGGAAAGCGAAGGAGAAAGTATGGCAATCTGAGGCGGCGAGACCTGGATGCAATGCGCGGTTTCCGTCGACGATGAATGTTCATTGGCTCTTTCTGAACCAAAGTGTTTTGATGCCAGTTACATGTATAGGAAGCGAGAATTTGGATGCTTTTGGGGAGCTACTGGTTTGCTGTGATCACCATGTAGTTTCTGTTGTAATTTTTTTCTTTTTTTGAAAAGACGTACTAGTATATCGGTATATGTTGTATTTTTGGCCATCAATTTAGCTCATAAGTTGTGTTCCTTGCCCATTTTTTGTGATCTCTAGCTGAAACTCGCAAATGGTGGCAAAGTGGAACATACAAACTGCTCTCCATTTCAATTTATAATAATAATTTTTCTATATAA - >LOC_Os11g05556.1
ACGCCACCAAAAATGGAGGCCACCAGTAGTACTACACTAGCGCTCTCCTCGCCGCCCACCGCCGCCGCCCGCCGCTCGCCGGCGAAGGCGATCGTCGCCTCCCACCACCTGCGCCACTCCTCCGTCCCCGCCCTTCACCTCCGCGCGGTCCCCGGCCCCTCCTTCCGCGCCCTCCCCTCACCCGGCTTCCCGGTCCCTCCCAACTGCTAGTTTCTTGGTTTCTTCAATTCTTCCGCCCCGGAGAAATTTCGCTTTTGCTGATTTGTCTTGGATGCGTTCAGGGATGGAGGAGGAAGAGGGGAAGCGGGCTGGTTGTGCGGGCAGAGATGTTTGGGCAGCTCACGACCGGGCTGGAGTCCGCGTGGAACAAGCTGCGGGGAACAGATCAACTGACGAAGGACAACATCGCTGAACCAATGCGGGATATCAGAAGAGCACTTTTGGAGGCAGATGTGAGTTTGCCGGTAGTGAGAAGTTTTATTGAGTCCGTTACTGAAAAAGCTGTAGGCACTGATGTGATTCGAGGTGTCAAGCCTGAGCAACAGCTGGTGAAGGTTGTGAATGATGAACTTGTACAGTTGATGGGTGGGGAGGTATCAGATTTGGTGTTTGCAAAAACTGCCCCAACAGTTATCCTATTGGCGGGTCTACAAGGTGTTGGGAAAACTACTGTTTGTGCAAAGCTTGCCTATTATCTAAAGAAAATGGGGAAGAGTTGCATGCTGATTGCTGCGGATGTCTACAGGCCTGCTGCCATTGATCAACTCACTATTCTGGGGAAACAGGTTGGGGTTCCAGTTTACTCTGAAGGAACTGAAGCTAAACCTTCACAAATTGCCAAGAATGGCATAAAGGAGGCAAAAAGCAAGAAAACTGACGTAATCATAGTGGATACTGCTGGAAGGCTGCAGGTAGATAAAGCCATGATGAGTGAGTTGAAAGAGGTAAAAAGGGCAGTAAATCCTACAGAAGTTCTACTTGTGGTGGATGCCATGACTGGACAAGAAGCTGCATCATTGGTTAGCACCTTCAATGTTGAGATTGGTATTACTGGTGCTATACTGACAAAACTGGATGGTGATTCCAGAGGTGGAGCAGCACTAAGTATCAAAGAGGTATCTGGAAAGCCCATCAAGTTTGTAGGGCGAGGAGAACGCATGGAAGATCTTGAGCCTTTCTATCCTGATCGTATGGCACAACGAATCTTGGGAATGGGAGATGTACTTTCATTTGTTGAAAAGGCACAGGAAGTGATGCGTCAAGAAGATGCTGAGGAATTACAGAAGAAGATCCTGAGTGCAAAATTTAACTTCAATGACTTCTTGAAGCAAACACAAGCTATCGCACAAATGGGTTCATTTAGTCGTATAATTGGCATGATTCCAGGCATGAACAAGGTTACCCCTGCTCAAATTCGTGAAGCGGAGAAAAACCTTAAATTTATGGAGTCCATGATCAACGTAATGACCCCTGAGGAAAGGGAAAGACCAGAGCTACTTGCTGAATCACGCGAGAGGAGGATAAGAGTGGCCAAGGAATCCGGAAAAAACGAACGACAGGTGAGCCAATTGGTTGCGCAGCTCTTCCGAATGCGTGCTCAAATGCAGAAAATGATGGGTGCTATGCAAGGGCAAGACACCCCTGATATGGAAGGCCTCATGGATTCCATCAAGGCAGAAGAGCAGGCTGCCGCTGGTACTGGAAAGCGAAGGAGAAAGTATGGCAATCTGAGGCGGCGAGACCTGGATGCAATGCGCGGTTTCCGTCGACGATGAATGTTCATTGGCTCTTTCTGAACCAAAGTGTTTTGATGCCAGTTACATGTATAGGAAGCGAGAATTTGGATGCTTTTGGGGAGCTACTGGTTTGCTGTGATCACCATGTAGTTTCTGTTGTAATTTTTTTCTTTTTTTGAAAAGACGTACTAGTATATCGGTATATGTTGTATTTTTGGCCATCAATTTAGCTCATAAGTTGTGTTCCTTGCCCATTTTTTGTGATCTCTAGCTGAAACTCGCAAATGGTGGCAAAGTGGAACATACAAACTGCTCTCCATTTCAATTTATAATAATAATTTTTCTATATAA
CDS Sequence
- >LOC_Os11g05556.2
ATGTTTGGGCAGCTCACGACCGGGCTGGAGTCCGCGTGGAACAAGCTGCGGGGAACAGATCAACTGACGAAGGACAACATCGCTGAACCAATGCGGGATATCAGAAGAGCACTTTTGGAGGCAGATGTGAGTTTGCCGGTAGTGAGAAGTTTTATTGAGTCCGTTACTGAAAAAGCTGTAGGCACTGATGTGATTCGAGGTGTCAAGCCTGAGCAACAGCTGGTGAAGGTTGTGAATGATGAACTTGTACAGTTGATGGGTGGGGAGGTATCAGATTTGGTGTTTGCAAAAACTGCCCCAACAGTTATCCTATTGGCGGGTCTACAAGGTGTTGGGAAAACTACTGTTTGTGCAAAGCTTGCCTATTATCTAAAGAAAATGGGGAAGAGTTGCATGCTGATTGCTGCGGATGTCTACAGGCCTGCTGCCATTGATCAACTCACTATTCTGGGGAAACAGGTTGGGGTTCCAGTTTACTCTGAAGGAACTGAAGCTAAACCTTCACAAATTGCCAAGAATGGCATAAAGGAGGCAAAAAGCAAGAAAACTGACGTAATCATAGTGGATACTGCTGGAAGGCTGCAGGTAGATAAAGCCATGATGAGTGAGTTGAAAGAGGTAAAAAGGGCAGTAAATCCTACAGAAGTTCTACTTGTGGTGGATGCCATGACTGGACAAGAAGCTGCATCATTGGTTAGCACCTTCAATGTTGAGATTGGTATTACTGGTGCTATACTGACAAAACTGGATGGTGATTCCAGAGGTGGAGCAGCACTAAGTATCAAAGAGGTATCTGGAAAGCCCATCAAGTTTGTAGGGCGAGGAGAACGCATGGAAGATCTTGAGCCTTTCTATCCTGATCGTATGGCACAACGAATCTTGGGAATGGGAGATGTACTTTCATTTGTTGAAAAGGCACAGGAAGTGATGCGTCAAGAAGATGCTGAGGAATTACAGAAGAAGATCCTGAGTGCAAAATTTAACTTCAATGACTTCTTGAAGCAAACACAAGCTATCGCACAAATGGGTTCATTTAGTCGTATAATTGGCATGATTCCAGGCATGAACAAGGTTACCCCTGCTCAAATTCGTGAAGCGGAGAAAAACCTTAAATTTATGGAGTCCATGATCAACGTAATGACCCCTGAGGAAAGGGAAAGACCAGAGCTACTTGCTGAATCACGCGAGAGGAGGATAAGAGTGGCCAAGGAATCCGGAAAAAACGAACGACAGGTGAGCCAATTGGTTGCGCAGCTCTTCCGAATGCGTGCTCAAATGCAGAAAATGATGGGTGCTATGCAAGGGCAAGACACCCCTGATATGGAAGGCCTCATGGATTCCATCAAGGCAGAAGAGCAGGCTGCCGCTGGTACTGGAAAGCGAAGGAGAAAGTATGGCAATCTGAGGCGGCGAGACCTGGATGCAATGCGCGGTTTCCGTCGACGATGA - >LOC_Os11g05556.1
ATGTTTGGGCAGCTCACGACCGGGCTGGAGTCCGCGTGGAACAAGCTGCGGGGAACAGATCAACTGACGAAGGACAACATCGCTGAACCAATGCGGGATATCAGAAGAGCACTTTTGGAGGCAGATGTGAGTTTGCCGGTAGTGAGAAGTTTTATTGAGTCCGTTACTGAAAAAGCTGTAGGCACTGATGTGATTCGAGGTGTCAAGCCTGAGCAACAGCTGGTGAAGGTTGTGAATGATGAACTTGTACAGTTGATGGGTGGGGAGGTATCAGATTTGGTGTTTGCAAAAACTGCCCCAACAGTTATCCTATTGGCGGGTCTACAAGGTGTTGGGAAAACTACTGTTTGTGCAAAGCTTGCCTATTATCTAAAGAAAATGGGGAAGAGTTGCATGCTGATTGCTGCGGATGTCTACAGGCCTGCTGCCATTGATCAACTCACTATTCTGGGGAAACAGGTTGGGGTTCCAGTTTACTCTGAAGGAACTGAAGCTAAACCTTCACAAATTGCCAAGAATGGCATAAAGGAGGCAAAAAGCAAGAAAACTGACGTAATCATAGTGGATACTGCTGGAAGGCTGCAGGTAGATAAAGCCATGATGAGTGAGTTGAAAGAGGTAAAAAGGGCAGTAAATCCTACAGAAGTTCTACTTGTGGTGGATGCCATGACTGGACAAGAAGCTGCATCATTGGTTAGCACCTTCAATGTTGAGATTGGTATTACTGGTGCTATACTGACAAAACTGGATGGTGATTCCAGAGGTGGAGCAGCACTAAGTATCAAAGAGGTATCTGGAAAGCCCATCAAGTTTGTAGGGCGAGGAGAACGCATGGAAGATCTTGAGCCTTTCTATCCTGATCGTATGGCACAACGAATCTTGGGAATGGGAGATGTACTTTCATTTGTTGAAAAGGCACAGGAAGTGATGCGTCAAGAAGATGCTGAGGAATTACAGAAGAAGATCCTGAGTGCAAAATTTAACTTCAATGACTTCTTGAAGCAAACACAAGCTATCGCACAAATGGGTTCATTTAGTCGTATAATTGGCATGATTCCAGGCATGAACAAGGTTACCCCTGCTCAAATTCGTGAAGCGGAGAAAAACCTTAAATTTATGGAGTCCATGATCAACGTAATGACCCCTGAGGAAAGGGAAAGACCAGAGCTACTTGCTGAATCACGCGAGAGGAGGATAAGAGTGGCCAAGGAATCCGGAAAAAACGAACGACAGGTGAGCCAATTGGTTGCGCAGCTCTTCCGAATGCGTGCTCAAATGCAGAAAATGATGGGTGCTATGCAAGGGCAAGACACCCCTGATATGGAAGGCCTCATGGATTCCATCAAGGCAGAAGAGCAGGCTGCCGCTGGTACTGGAAAGCGAAGGAGAAAGTATGGCAATCTGAGGCGGCGAGACCTGGATGCAATGCGCGGTTTCCGTCGACGATGA
Protein Sequence
- >LOC_Os11g05556.2
MFGQLTTGLESAWNKLRGTDQLTKDNIAEPMRDIRRALLEADVSLPVVRSFIESVTEKAVGTDVIRGVKPEQQLVKVVNDELVQLMGGEVSDLVFAKTAPTVILLAGLQGVGKTTVCAKLAYYLKKMGKSCMLIAADVYRPAAIDQLTILGKQVGVPVYSEGTEAKPSQIAKNGIKEAKSKKTDVIIVDTAGRLQVDKAMMSELKEVKRAVNPTEVLLVVDAMTGQEAASLVSTFNVEIGITGAILTKLDGDSRGGAALSIKEVSGKPIKFVGRGERMEDLEPFYPDRMAQRILGMGDVLSFVEKAQEVMRQEDAEELQKKILSAKFNFNDFLKQTQAIAQMGSFSRIIGMIPGMNKVTPAQIREAEKNLKFMESMINVMTPEERERPELLAESRERRIRVAKESGKNERQVSQLVAQLFRMRAQMQKMMGAMQGQDTPDMEGLMDSIKAEEQAAAGTGKRRRKYGNLRRRDLDAMRGFRRR* - >LOC_Os11g05556.1
MFGQLTTGLESAWNKLRGTDQLTKDNIAEPMRDIRRALLEADVSLPVVRSFIESVTEKAVGTDVIRGVKPEQQLVKVVNDELVQLMGGEVSDLVFAKTAPTVILLAGLQGVGKTTVCAKLAYYLKKMGKSCMLIAADVYRPAAIDQLTILGKQVGVPVYSEGTEAKPSQIAKNGIKEAKSKKTDVIIVDTAGRLQVDKAMMSELKEVKRAVNPTEVLLVVDAMTGQEAASLVSTFNVEIGITGAILTKLDGDSRGGAALSIKEVSGKPIKFVGRGERMEDLEPFYPDRMAQRILGMGDVLSFVEKAQEVMRQEDAEELQKKILSAKFNFNDFLKQTQAIAQMGSFSRIIGMIPGMNKVTPAQIREAEKNLKFMESMINVMTPEERERPELLAESRERRIRVAKESGKNERQVSQLVAQLFRMRAQMQKMMGAMQGQDTPDMEGLMDSIKAEEQAAAGTGKRRRKYGNLRRRDLDAMRGFRRR*