Information report for TOM1;OsZIFL4
Gene Details
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Functional Descriptions
- Xenopus laevis oocytes expressing TOM1 or HvTOM1 released (14)C-labeled deoxymugineic acid but not (14)C-labeled nicotianamine, a structural analog and biosynthetic precursor of deoxymugineic acid, indicating that the TOM1 and HvTOM1 proteins are the phytosiderophore efflux transporters.
- In rice roots, the efficiency of deoxymugineic acid secretion was enhanced by overexpression of TOM1 and decreased by its repression, providing further evidence that TOM1 encodes the efflux transporter of deoxymugineic acid.
- Under conditions of iron deficiency, rice and barley roots express high levels of TOM1 and HvTOM1, respectively, and the overexpression of these genes increased tolerance to iron deficiency.
- Transcripts of OsZIFL4, OsZIFL5, OsZIFL7, and OsZIFL12 accumulate in response to Zn-excess and Fe-deficiency in roots, two stresses with partially overlapping responses.
Functional Keywords
- transporter , iron , root
Literature and News
- Phytosiderophore efflux transporters are crucial for iron acquisition in graminaceous plants . DOI: 10.1074/jbc.M110.180026 ; PMID: 21156806
- Identification of OsbHLH133 as a regulator of iron distribution between roots and shoots in Oryza sativa . DOI: 10.1111/j.1365-3040.2012.02569.x ; PMID: 22755510
- ZINC-INDUCED FACILITATOR-LIKE family in plants: lineage-specific expansion in monocotyledons and conserved genomic and expression features among rice (Oryza sativa) paralogs . DOI: 10.1186/1471-2229-11-20 ; PMID: 21266036
- Novel rice iron biofortification approaches using expression of ZmYS1 and OsTOM1 controlled by tissue-specific promoters . DOI: 10.1093/jxb/erac214 ; PMID: 35648686
Gene Resources
- UniProt: Q2RAW8
- EMBL: AP014967, DP000010
- AlphaFoldDB: Q2RAW8
- EnsemblPlants: Os11t0134900-01
- Gramene: Os11t0134900-01
- KEGG: osa:4349704
- Orthologous matrix: HPVAYFM
- InterPro: IPR011701, IPR020846, IPR036259
- PANTHER: PTHR23504, PTHR23504:SF30
- SUPFAM: SSF103473
- PROSITE: PS50850
- Gene3D: 1.20.1250.20
- SWISS-MODEL: Q2RAW8
- Conserved Domain Database: cd17330
- eggNOG: KOG2615
Sequences
cDNA Sequence
- >LOC_Os11g04020.1
GGACTTTTCAGGTCAGCTAGCTACTGCAAATAGTCAATGAGTGAGGAGGCACCGCCATCGCCGGTGATGAGGCCGGTGTTCTACGATGGCTGCCCCGGCTGCGCCATGGAACGGAAGCTGGAGAGCAGCCAAGGCATCCCCTACAAGGAGTTCTTCTTTGTTGGGATCACCACCATTGCCTCTTCTTTACCAATATCCTCGTTGTTCCCATTCCTCTACTTCATGATAGAAGATCTGCATGTGGCAAAAAAGGAACAAGATATTGGATTATACGCTGGATTTCTTGGTGCATCATATATGATCGGTAGATGTTTTGCCTCACTCTTTTGGGGTGTAGTTGCAGATCGTATAGGGAGGAAGCCTATCATTAAATTTTCTATTTTATCAGTGGTCATATTCAACACTCTGTTCGGATTAAGTGTGAAGTATTGGATGGCAATCGCCACAAGATTCCTTCTTGGTGCTCTAAATGGCATGCTGGCCCCAATAAAGGCTTATTCCATTGAAGTTTGTCGACCTGAACATCAAGCTCTAGGATTATCAATAGTAAGCACTGGTTGGGGCGTAGGGCTTGTTGTGGGTCCAGCCATTGGAGGCTACTTTGCACAGCCTGCTAAGCAATATCCAAATGTATTTTCCGAGAAGTCAATATTTGGGAGGTTCCCATACTTCTTGCCATGCCTTTGTATCTCACTCATTGCTCTTGTTGTTCTTATAAGCTGCATATGGCTACCGGAGACACTTCATAAGCATAAAGATACTGAAGGTGAAATTGAAATGATTGACAACTCAAGAAGTACACTTGAAGAAGATTCACATAAACAGAAGAGTCTCTACAAGAACTGGCCATTGATATCCTCTATTATTGCATATTGTGTTTTCACCCTTCATGATACAGCATATAGTGAGATATTTTCCTTATGGGCTGTAAGTGAGAAAAGATATGGTGGGTTAAGTTTTTCGTCTAAAGAAGTTGGTCAAGTTCTTGCAGTTGCAGGTGCTGGTCTACTTGTGTATCAGCTTTTCATCTATAGATCGGTCCATAAATTTCTTGGATCCATCAATTCATCTCGTATTGCATCAGCTTTATCTGTACCAATTCTCGCTACTTATCCCTTTATGACACACTTGTCAGGGTTTAGACTTGGAATAGCTCTTTACCTTGGAACCATTTTAAAGGGTGTTTTATCAATAACTATCATAACGGGCACTTCCCTACTCCAAAATAATGCGGTTTCACAAAGTCAAAGAGGTGCTGCAAATGGCATATCTACGACGGCAATGTCATTCTTCAAGGCAATTGCTCCAGCAGGAGCAGGAGCTCTGTTCTCTTGGGCCCAAGAACGCCAAAATGAAGCCTTCTTCCCAGGGGATCAAATGATATTCTTTATTCTGAATGTGATTGAATTAATTGGACTTGCGTTGACCTTCAAGCCGTTCCTGGCAATACCAAATTAAACAATTATCAGTTGAAGTAGAAGCTGGAATAGCACCCCCAAGCAATGAAGAATTATTATGCAAGACTACACTGTGTTGTGGTTTACTGAATTGATGTTTGGCTTAAGTGATGTACATAGAAATATATGGCCCATCTTCAGAATCATAAAATTAATGTACAAGAGACTGTTTATCTGAAAATGTTCTTCTTTCCATGAAGACCCTATGTATGGTGATGGATTAGAGTTTACATTGCGTGGATGCAAGCATAGACTTGAAGGCAGTGCAATGACTACTAATTTTAGCTTCCACATTTCTTGTACGCAAGCCTGTCTCTCTCCCCAGCTTCAAAGGAATGGGGAGATCTTGTTTCATGCGTACAGTGTTGGATGTTTACTACTCCGAATCAATCAATTACCCAGGAATTCAGGAATGTTT
CDS Sequence
- >LOC_Os11g04020.1
ATGAGTGAGGAGGCACCGCCATCGCCGGTGATGAGGCCGGTGTTCTACGATGGCTGCCCCGGCTGCGCCATGGAACGGAAGCTGGAGAGCAGCCAAGGCATCCCCTACAAGGAGTTCTTCTTTGTTGGGATCACCACCATTGCCTCTTCTTTACCAATATCCTCGTTGTTCCCATTCCTCTACTTCATGATAGAAGATCTGCATGTGGCAAAAAAGGAACAAGATATTGGATTATACGCTGGATTTCTTGGTGCATCATATATGATCGGTAGATGTTTTGCCTCACTCTTTTGGGGTGTAGTTGCAGATCGTATAGGGAGGAAGCCTATCATTAAATTTTCTATTTTATCAGTGGTCATATTCAACACTCTGTTCGGATTAAGTGTGAAGTATTGGATGGCAATCGCCACAAGATTCCTTCTTGGTGCTCTAAATGGCATGCTGGCCCCAATAAAGGCTTATTCCATTGAAGTTTGTCGACCTGAACATCAAGCTCTAGGATTATCAATAGTAAGCACTGGTTGGGGCGTAGGGCTTGTTGTGGGTCCAGCCATTGGAGGCTACTTTGCACAGCCTGCTAAGCAATATCCAAATGTATTTTCCGAGAAGTCAATATTTGGGAGGTTCCCATACTTCTTGCCATGCCTTTGTATCTCACTCATTGCTCTTGTTGTTCTTATAAGCTGCATATGGCTACCGGAGACACTTCATAAGCATAAAGATACTGAAGGTGAAATTGAAATGATTGACAACTCAAGAAGTACACTTGAAGAAGATTCACATAAACAGAAGAGTCTCTACAAGAACTGGCCATTGATATCCTCTATTATTGCATATTGTGTTTTCACCCTTCATGATACAGCATATAGTGAGATATTTTCCTTATGGGCTGTAAGTGAGAAAAGATATGGTGGGTTAAGTTTTTCGTCTAAAGAAGTTGGTCAAGTTCTTGCAGTTGCAGGTGCTGGTCTACTTGTGTATCAGCTTTTCATCTATAGATCGGTCCATAAATTTCTTGGATCCATCAATTCATCTCGTATTGCATCAGCTTTATCTGTACCAATTCTCGCTACTTATCCCTTTATGACACACTTGTCAGGGTTTAGACTTGGAATAGCTCTTTACCTTGGAACCATTTTAAAGGGTGTTTTATCAATAACTATCATAACGGGCACTTCCCTACTCCAAAATAATGCGGTTTCACAAAGTCAAAGAGGTGCTGCAAATGGCATATCTACGACGGCAATGTCATTCTTCAAGGCAATTGCTCCAGCAGGAGCAGGAGCTCTGTTCTCTTGGGCCCAAGAACGCCAAAATGAAGCCTTCTTCCCAGGGGATCAAATGATATTCTTTATTCTGAATGTGATTGAATTAATTGGACTTGCGTTGACCTTCAAGCCGTTCCTGGCAATACCAAATTAA
Protein Sequence
- >LOC_Os11g04020.1
MSEEAPPSPVMRPVFYDGCPGCAMERKLESSQGIPYKEFFFVGITTIASSLPISSLFPFLYFMIEDLHVAKKEQDIGLYAGFLGASYMIGRCFASLFWGVVADRIGRKPIIKFSILSVVIFNTLFGLSVKYWMAIATRFLLGALNGMLAPIKAYSIEVCRPEHQALGLSIVSTGWGVGLVVGPAIGGYFAQPAKQYPNVFSEKSIFGRFPYFLPCLCISLIALVVLISCIWLPETLHKHKDTEGEIEMIDNSRSTLEEDSHKQKSLYKNWPLISSIIAYCVFTLHDTAYSEIFSLWAVSEKRYGGLSFSSKEVGQVLAVAGAGLLVYQLFIYRSVHKFLGSINSSRIASALSVPILATYPFMTHLSGFRLGIALYLGTILKGVLSITIITGTSLLQNNAVSQSQRGAANGISTTAMSFFKAIAPAGAGALFSWAQERQNEAFFPGDQMIFFILNVIELIGLALTFKPFLAIPN*