Gene Details:

Functional Descriptions:

  • Osa-miR1320 targets the ERF transcription factor OsERF096 to regulate cold tolerance via JA-mediated signaling.
  • Furthermore, an AP2/ERF (APETALA2/ethylene-responsive factor) transcription factor OsERF096 was identified as a target of miR1320 via 5'-RACE and dual luciferase assays.
  • Consistently, OsERF096 negatively regulated cold stress tolerance.
  • OsERF096 expression was altered by miR1320 overexpression and knockdown and exhibited an opposite pattern to that of miR1320 in different tissues and under cold stress.
  • Furthermore, we suggested that OsERF096 could bind to the GCC and DRE cis-elements and act as a transcriptional activator in the nucleus.

Literature:

Gene Resources:

  • NCBI ID:
  • UniProt accessions:

Sequences:

cDNA Sequence
  • >LOC_Os10g41330.1
    CTCGCTCGCGCGCCACACTCCTCGAACCACCACCACCACCACCACGTGTTCGATCGCGTCCTCCAAGCCCCAGCACCTACGCGTCGTCGCGCCATGGCCGGCTTCGGCTTGGACCAGCACCTCGACCTCATCCGCGCCCACCTCCTCGAAGACGCCCACCACCACGTCCTCGCGCCATCGCCGTCGCCCTCGCCACCGGGTACTGGGCGTGTCAGGCCGGCGCCCGTGTCGCTGCCCCCGAGGCCGCCGCTCCTGTGGGCGGCGGCGTCGGCGGCGCCGCGGCAGCAGGAGGAGTGCTTCGAGCTCGGCGGCGGCTACGCGGGGGAGGGGGAGGGGGAGGAGGAGGACGACTTCCGGCGGTACCGCGGGGTGCGGCAGCGGCCGTGGGGCAAGTACGCGGCGGAGATCCGGGACCCGGCGAGGAAGGGCGCGAGGGTGTGGCTCGGCACCTACGACACCGCCGTCGAGGCCGCGCGCGCCTACGACCGCGCCGCGTTCCAGCTCCGCGGGTCCAAGGCCATCCTCAACTTCCCCAACGAGGTCGCCGCCGACGCCGCCGTCAAGTGGGCCCCTCCCGTCGCCCCTATCCCCGCCGCCGCCATGTCCGCCGGAAGAGGCAAGAGGGTGAGGTCGGAGGAGCAGTACTACTTGAGGGAGGTGAAGAAGGAGAGGCTGATCATGGCGCCGCCGGAGAACTCCTCCTCGTCGTCGTCGTCGGCGGCGGCGGCAGCCGGAGACATCTGGGACGAGCTGAAGGGGATCTGCAGCCTGCCGCCGCTCTCGCCGCTGTCGCCGCACCCGCACATGGCCTTCCCGCAGCTGTTCGTAATCGATTTGGCTTTCGGCCAAATATTGAATTCTTTCGTTCTATTGCTGCTCAGAACACGTGATTTTGCTTTTGACTATGCTATTTGATGATTAAACAGAGAAGAAATATTCGTCTTACAAGATCATATCACCGAAAAGACTAGCTAGGCGCATGGAGTAGTACTGGAAACAAGCTCTGCTAAGGCCCTCTTTGTTTAGGCTTAAGCTTATTGGACTAGACTTTTAAGCCAGCTGTGGTTAATCTAGGCCCATTTTGGAAAAAAAAACATTAGCTGTAATTTTTCTCGAAGTTATATATTTCTTGCACTAAAAAATTA
  • >LOC_Os10g41330.2
    CTCGCTCGCGCGCCACACTCCTCGAACCACCACCACCACCACCACGTGTTCGATCGCGTCCTCCAAGCCCCAGCACCTACGCGTCGTCGCGCCATGGCCGGCTTCGGCTTGGACCAGCACCTCGACCTCATCCGCGCCCACCTCCTCGAAGACGCCCACCACCACGTCCTCGCGCCATCGCCGTCGCCCTCGCCACCGGGTACTGGGCGTGTCAGGCCGGCGCCCGTGTCGCTGCCCCCGAGGCCGCCGCTCCTGTGGGCGGCGGCGTCGGCGGCGCCGCGGCAGCAGGAGGAGTGCTTCGAGCTCGGCGGCGGCTACGCGGGGGAGGGGGAGGGGGAGGAGGAGGACGACTTCCGGCGGTACCGCGGGGTGCGGCAGCGGCCGTGGGGCAAGTACGCGGCGGAGATCCGGGACCCGGCGAGGAAGGGCGCGAGGGTGTGGCTCGGCACCTACGACACCGCCGTCGAGGCCGCGCGCGCCTACGACCGCGCCGCGTTCCAGCTCCGCGGGTCCAAGGCCATCCTCAACTTCCCCAACGAGGTCGCCGCCGACGCCGCCGTCAAGTGGGCCCCTCCCGTCGCCCCTATCCCCGCCGCCGCCATGTCCGCCGGAAGAGGCAAGAGGGTGAGGTCGGAGGAGCAGTACTACTTGAGGGAGGTGAAGAAGGAGAGGCTGATCATGGCGCCGCCGGAGAACTCCTCCTCGTCGTCGTCGTCGGCGGCGGCGGCAGCCGGAGACATCTGGGACGAGCTGAAGGGGATCTGCAGCCTGCCGCCGCTCTCGCCGCTGTCGCCGCACCCGCACATGGCCTTCCCGCAGCTGTTCGTAATCGATTTGGCTTTCGGCCAAATATTGAATTCTTTCGTTCTATTGCTGCTCAGAACACGTGATTTTGCTTTTGACTATGCTATTTGATGATTAAACAGAGAAGAAATATTCGTCTTACAAGATCATATCACCGAAAAGACTAGCTAGGCGCATGGAGTAGTACTGGAAACAAGCTCTGCTAAGGCCCTCTTTGTTTAGGCTTAAGCTTATTGGACTAGACTTTTAAGCCAGCTGTGGTTAATCTAGGCCCATTTTGGAAAAAAAAACATTAGCTGTAATTTTTCTCGAAGTTATATATTTCTTGCACTAAAAAATTA
CDS Sequence
  • >LOC_Os10g41330.1
    ATGGCCGGCTTCGGCTTGGACCAGCACCTCGACCTCATCCGCGCCCACCTCCTCGAAGACGCCCACCACCACGTCCTCGCGCCATCGCCGTCGCCCTCGCCACCGGGTACTGGGCGTGTCAGGCCGGCGCCCGTGTCGCTGCCCCCGAGGCCGCCGCTCCTGTGGGCGGCGGCGTCGGCGGCGCCGCGGCAGCAGGAGGAGTGCTTCGAGCTCGGCGGCGGCTACGCGGGGGAGGGGGAGGGGGAGGAGGAGGACGACTTCCGGCGGTACCGCGGGGTGCGGCAGCGGCCGTGGGGCAAGTACGCGGCGGAGATCCGGGACCCGGCGAGGAAGGGCGCGAGGGTGTGGCTCGGCACCTACGACACCGCCGTCGAGGCCGCGCGCGCCTACGACCGCGCCGCGTTCCAGCTCCGCGGGTCCAAGGCCATCCTCAACTTCCCCAACGAGGTCGCCGCCGACGCCGCCGTCAAGTGGGCCCCTCCCGTCGCCCCTATCCCCGCCGCCGCCATGTCCGCCGGAAGAGGCAAGAGGGTGAGGTCGGAGGAGCAGTACTACTTGAGGGAGGTGAAGAAGGAGAGGCTGATCATGGCGCCGCCGGAGAACTCCTCCTCGTCGTCGTCGTCGGCGGCGGCGGCAGCCGGAGACATCTGGGACGAGCTGAAGGGGATCTGCAGCCTGCCGCCGCTCTCGCCGCTGTCGCCGCACCCGCACATGGCCTTCCCGCAGCTGTTCGTAATCGATTTGGCTTTCGGCCAAATATTGAATTCTTTCGTTCTATTGCTGCTCAGAACACGTGATTTTGCTTTTGACTATGCTATTTGA
  • >LOC_Os10g41330.2
    ATGGCCGGCTTCGGCTTGGACCAGCACCTCGACCTCATCCGCGCCCACCTCCTCGAAGACGCCCACCACCACGTCCTCGCGCCATCGCCGTCGCCCTCGCCACCGGGTACTGGGCGTGTCAGGCCGGCGCCCGTGTCGCTGCCCCCGAGGCCGCCGCTCCTGTGGGCGGCGGCGTCGGCGGCGCCGCGGCAGCAGGAGGAGTGCTTCGAGCTCGGCGGCGGCTACGCGGGGGAGGGGGAGGGGGAGGAGGAGGACGACTTCCGGCGGTACCGCGGGGTGCGGCAGCGGCCGTGGGGCAAGTACGCGGCGGAGATCCGGGACCCGGCGAGGAAGGGCGCGAGGGTGTGGCTCGGCACCTACGACACCGCCGTCGAGGCCGCGCGCGCCTACGACCGCGCCGCGTTCCAGCTCCGCGGGTCCAAGGCCATCCTCAACTTCCCCAACGAGGTCGCCGCCGACGCCGCCGTCAAGTGGGCCCCTCCCGTCGCCCCTATCCCCGCCGCCGCCATGTCCGCCGGAAGAGGCAAGAGGGTGAGGTCGGAGGAGCAGTACTACTTGAGGGAGGTGAAGAAGGAGAGGCTGATCATGGCGCCGCCGGAGAACTCCTCCTCGTCGTCGTCGTCGGCGGCGGCGGCAGCCGGAGACATCTGGGACGAGCTGAAGGGGATCTGCAGCCTGCCGCCGCTCTCGCCGCTGTCGCCGCACCCGCACATGGCCTTCCCGCAGCTGTTCGTAATCGATTTGGCTTTCGGCCAAATATTGAATTCTTTCGTTCTATTGCTGCTCAGAACACGTGATTTTGCTTTTGACTATGCTATTTGA
Protein Sequence
  • >LOC_Os10g41330.1
    MAGFGLDQHLDLIRAHLLEDAHHHVLAPSPSPSPPGTGRVRPAPVSLPPRPPLLWAAASAAPRQQEECFELGGGYAGEGEGEEEDDFRRYRGVRQRPWGKYAAEIRDPARKGARVWLGTYDTAVEAARAYDRAAFQLRGSKAILNFPNEVAADAAVKWAPPVAPIPAAAMSAGRGKRVRSEEQYYLREVKKERLIMAPPENSSSSSSSAAAAAGDIWDELKGICSLPPLSPLSPHPHMAFPQLFVIDLAFGQILNSFVLLLLRTRDFAFDYAI*
  • >LOC_Os10g41330.2
    MAGFGLDQHLDLIRAHLLEDAHHHVLAPSPSPSPPGTGRVRPAPVSLPPRPPLLWAAASAAPRQQEECFELGGGYAGEGEGEEEDDFRRYRGVRQRPWGKYAAEIRDPARKGARVWLGTYDTAVEAARAYDRAAFQLRGSKAILNFPNEVAADAAVKWAPPVAPIPAAAMSAGRGKRVRSEEQYYLREVKKERLIMAPPENSSSSSSSAAAAAGDIWDELKGICSLPPLSPLSPHPHMAFPQLFVIDLAFGQILNSFVLLLLRTRDFAFDYAI*