Information report for OsNRT1.3;NRT1.1B
Gene Details
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Functional Descriptions
- Variation in NRT1.1B contributes to nitrate-use divergence between rice subspecies.
- Here we show that variation in a nitrate-transporter gene, NRT1.1B (OsNPF6.5), may contribute to this divergence in nitrate use.
- NRT1.1B is associated with root microbiota composition and nitrogen use in field-grown rice.
Functional Keywords
Literature and News
- Functional characterization of a putative nitrate transporter gene promoter from rice . DOI: 10.1111/j.1745-7270.2006.00225.x ; PMID: 17091197
- Variation in NRT1.1B contributes to nitrate-use divergence between rice subspecies . DOI: 10.1038/ng.3337 ; PMID: 26053497
- Efficient allelic replacement in rice by gene editing: A case study of the NRT1.1B gene . DOI: 10.1111/jipb.12650 ; PMID: 29575650
- NRT1.1B improves selenium concentrations in rice grains by facilitating selenomethinone translocation . DOI: 10.1111/pbi.13037 ; PMID: 30466149
- Nitrate-NRT1.1B-SPX4 cascade integrates nitrogen and phosphorus signalling networks in plants . DOI: 10.1038/s41477-019-0384-1 ; PMID: 30911122
- NRT1.1B is associated with root microbiota composition and nitrogen use in field-grown rice . DOI: 10.1038/s41587-019-0104-4 ; PMID: 31036930
- A putative 6-transmembrane nitrate transporter OsNRT1.1b plays a key role in rice under low nitrogen . DOI: 10.1111/jipb.12382 ; PMID: 26220694
- Plastic transport systems of rice for mineral elements in response to diverse soil environmental changes . DOI: 10.1111/nph.16335 ; PMID: 31758804
- The Amino Acid Transporter OsAAP4 Contributes to Rice Tillering and Grain Yield by Regulating Neutral Amino Acid Allocation through Two Splicing Variants . DOI: 10.1186/s12284-020-00446-9 ; PMID: 33409665
Gene Resources
- UniProt: Q336T8
- EMBL: AK068409, AP014966, DP000086
- AlphaFoldDB: Q336T8
- EnsemblPlants: Os10t0554200-02
- Gramene: Os10t0554200-02
- KEGG: osa:4349339
- Orthologous matrix: FVGTSFM
Sequences
cDNA Sequence
- >LOC_Os10g40600.1
ATCACAGCATCCATCGCCGCCGGCCACCACCACCACCACCGCCGCCGCCGTCTTACTCTCTCTGTCTCGAGCTCGAGCTTGTTGTTGTTGATATGGCGATGGTGTTGCCGGAGACGGCGGCGGAGGGGAAGGCGCTGACGGACGCGTGGGACTACAAGGGGAGGCCGGCGGGGAGGGCGGCCACCGGCGGGTGGGGCTGCGCGGCGATGATCCTCGGGGCGGAGCTGTTCGAGCGGATGACGACGCTGGGCATCGCCGTCAACCTGGTGCCGTACATGACCGGGACGATGCACCTCGGCAATGCCGCCGCCGCCAACACGGTCACCAACTTCATCGGCACCTCCTTCATGCTCTGCCTCCTCGGCGGCTTCGTCGCCGACACCTACCTCGGCCGCTACCTCACCATCGCCATCTTCGAGGCCGTCCAGGCCACCGGCGTGATGATACTCACGATCTCCACGGCGGCGCCGGGGCTGCGGCCGCCGGCGTGCGGCGACCCGAAGGGGGCGAGCGCGGAGTGCGTGGCGGCGGACGGGACGCAGCTCGGGGTGCTCTACCTGGGGCTCTACCTGACGGCGCTGGGCACGGGGGGGCTCAAGTCCAGCGTCTCCGGCTTCGGCTCCGACCAGTTCGACGAGTCCGACGTCGACGGCGAGAGGAAGAAGATGATGCGCTTCTTCAACTGGTTCTACTTCTTCGTCAGCCTCGGCGCGCTGCTCGCCGTCACCGTGCTGGTGTACGTGCAGGACAACGTCGGACGCCGGTGGGGGTACGGCATCTGCGCCGCCGGCATCCTCGCCGGCCTCGCCGTGTTCCTCTCCGGGACCAGGAGGTACAGGTTCAAGAAGCTGGTGGGGAGCCCCCTCACCCAGGTCGCCGCCGTCACCGCCGCCGCCTGGAGCAAGAGGTCGCTGCCGCTGCCGTCCGACCCAGACATGCTCTACGACGTCGACGACGCCGCCGCCGCCGGCCATGACGTCAAGGGCAAGCAGAGGATGCCACACAGCAAGGAGTGCCGGTTCCTGGACCATGCGGCGATCATCGACAGGTCGGCGGCGGAGTCGCCGGCGACGGCGAGCAAGTGGAGGCTGTGCACGAGGACGGACGTGGAGGAGGTGAAGCAGGTGGTGCGGATGCTCCCCATCTGGGCGACCACCATCATGTTCTGGACCATCCACGCCCAGATGACCACCTTCGCCGTCGCGCAGGCCGAGCTCATGGACCGCCGCCTCGCCGGCGGCTTCCTCATCCCGGCGGGCTCCCTCACCGTCTTCCTCATCGCCTCCATCCTCCTCACCGTCCCCTTCTACGACCGCCTCGTCGTCCCCGTCGCGCGCCGCGCCACGGCCAACCCGCACGGCCTCACCCCGCTCCAGCGCGTCTTCGTGGGCCTCTCCCTCTCCATCGCCGGCATGGCCGTCGCCGCGGCCGTCGAGCGCCACCGCGCCACCGCCTCCGCCTCCGCCGCCGCCGCCGCGCCCACGGTGTTCCTCCTCATGCCGCAGTTCCTCCTCGTCGGCGCCGGCGAGGCGTTCACCTACATGGGCCAGCTCGACTTCTTCCTCCGCGAGTGCCCCAAGGGGATGAAGACCATGAGCACGGGCCTCTTCCTCAGCACCTGCGCCATCGGCTTCTTCTTCAGCACGCTGCTCGTCACCATCGTCCACAAGGTCACCGGCCATGGCGCCCGCGGCGGCGGCTGGCTCGCCGACAACCTCGACGACGGCAGGCTCGACTACTTCTACTGGCTGCTCGCCGTCATCAGCGCCATCAACCTCGTCCTCTTCACCGTCGCCGCCAGGGGGTACGTCTACAAGGAGAAGCGCCTCGCCGACGCCGGCATCGAGCTCGCCGACGAGGAGACCATCGCCGTCGGCCACTAATAGTGACCGATCGATGCGTCAGCATGACATACGCAAGCTAGCTACCAGTTAGCTGCACGCGTCGTGTATGTACGTCGTCCTTGTAATAACTTTGGTTTTTTCTTTTCTTGTATTTTGAATTTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCGTGTATTGTATTCGACGTATTTCGCCGGGTATAATTTGGGTGTATTCTCATCGCACGTATAATTAATTAATTAACCAACTACGTAATAACTACGTGGAGTTAATTAATGTGTACGTACGTGGGGTGTATGTAGAAGGAAGATATATACGTACGTAGGGAAGGGGGAGATTTATACGGCAATGTATAATTTGCCACAAAGTGTATTACTGATGTATATGTTTATACGTCTTTTATACTGATAGTGTGCAGGGCAGGAGGAAATTCCTGCATATGCGAGGTGCGGGCGCACCTCTCAATCTGATCAATAAATTAAACACAAAAAAGTTTTTGTTCATATGAGAAA
CDS Sequence
- >LOC_Os10g40600.1
ATGGCGATGGTGTTGCCGGAGACGGCGGCGGAGGGGAAGGCGCTGACGGACGCGTGGGACTACAAGGGGAGGCCGGCGGGGAGGGCGGCCACCGGCGGGTGGGGCTGCGCGGCGATGATCCTCGGGGCGGAGCTGTTCGAGCGGATGACGACGCTGGGCATCGCCGTCAACCTGGTGCCGTACATGACCGGGACGATGCACCTCGGCAATGCCGCCGCCGCCAACACGGTCACCAACTTCATCGGCACCTCCTTCATGCTCTGCCTCCTCGGCGGCTTCGTCGCCGACACCTACCTCGGCCGCTACCTCACCATCGCCATCTTCGAGGCCGTCCAGGCCACCGGCGTGATGATACTCACGATCTCCACGGCGGCGCCGGGGCTGCGGCCGCCGGCGTGCGGCGACCCGAAGGGGGCGAGCGCGGAGTGCGTGGCGGCGGACGGGACGCAGCTCGGGGTGCTCTACCTGGGGCTCTACCTGACGGCGCTGGGCACGGGGGGGCTCAAGTCCAGCGTCTCCGGCTTCGGCTCCGACCAGTTCGACGAGTCCGACGTCGACGGCGAGAGGAAGAAGATGATGCGCTTCTTCAACTGGTTCTACTTCTTCGTCAGCCTCGGCGCGCTGCTCGCCGTCACCGTGCTGGTGTACGTGCAGGACAACGTCGGACGCCGGTGGGGGTACGGCATCTGCGCCGCCGGCATCCTCGCCGGCCTCGCCGTGTTCCTCTCCGGGACCAGGAGGTACAGGTTCAAGAAGCTGGTGGGGAGCCCCCTCACCCAGGTCGCCGCCGTCACCGCCGCCGCCTGGAGCAAGAGGTCGCTGCCGCTGCCGTCCGACCCAGACATGCTCTACGACGTCGACGACGCCGCCGCCGCCGGCCATGACGTCAAGGGCAAGCAGAGGATGCCACACAGCAAGGAGTGCCGGTTCCTGGACCATGCGGCGATCATCGACAGGTCGGCGGCGGAGTCGCCGGCGACGGCGAGCAAGTGGAGGCTGTGCACGAGGACGGACGTGGAGGAGGTGAAGCAGGTGGTGCGGATGCTCCCCATCTGGGCGACCACCATCATGTTCTGGACCATCCACGCCCAGATGACCACCTTCGCCGTCGCGCAGGCCGAGCTCATGGACCGCCGCCTCGCCGGCGGCTTCCTCATCCCGGCGGGCTCCCTCACCGTCTTCCTCATCGCCTCCATCCTCCTCACCGTCCCCTTCTACGACCGCCTCGTCGTCCCCGTCGCGCGCCGCGCCACGGCCAACCCGCACGGCCTCACCCCGCTCCAGCGCGTCTTCGTGGGCCTCTCCCTCTCCATCGCCGGCATGGCCGTCGCCGCGGCCGTCGAGCGCCACCGCGCCACCGCCTCCGCCTCCGCCGCCGCCGCCGCGCCCACGGTGTTCCTCCTCATGCCGCAGTTCCTCCTCGTCGGCGCCGGCGAGGCGTTCACCTACATGGGCCAGCTCGACTTCTTCCTCCGCGAGTGCCCCAAGGGGATGAAGACCATGAGCACGGGCCTCTTCCTCAGCACCTGCGCCATCGGCTTCTTCTTCAGCACGCTGCTCGTCACCATCGTCCACAAGGTCACCGGCCATGGCGCCCGCGGCGGCGGCTGGCTCGCCGACAACCTCGACGACGGCAGGCTCGACTACTTCTACTGGCTGCTCGCCGTCATCAGCGCCATCAACCTCGTCCTCTTCACCGTCGCCGCCAGGGGGTACGTCTACAAGGAGAAGCGCCTCGCCGACGCCGGCATCGAGCTCGCCGACGAGGAGACCATCGCCGTCGGCCACTAA
Protein Sequence
- >LOC_Os10g40600.1
MAMVLPETAAEGKALTDAWDYKGRPAGRAATGGWGCAAMILGAELFERMTTLGIAVNLVPYMTGTMHLGNAAAANTVTNFIGTSFMLCLLGGFVADTYLGRYLTIAIFEAVQATGVMILTISTAAPGLRPPACGDPKGASAECVAADGTQLGVLYLGLYLTALGTGGLKSSVSGFGSDQFDESDVDGERKKMMRFFNWFYFFVSLGALLAVTVLVYVQDNVGRRWGYGICAAGILAGLAVFLSGTRRYRFKKLVGSPLTQVAAVTAAAWSKRSLPLPSDPDMLYDVDDAAAAGHDVKGKQRMPHSKECRFLDHAAIIDRSAAESPATASKWRLCTRTDVEEVKQVVRMLPIWATTIMFWTIHAQMTTFAVAQAELMDRRLAGGFLIPAGSLTVFLIASILLTVPFYDRLVVPVARRATANPHGLTPLQRVFVGLSLSIAGMAVAAAVERHRATASASAAAAAPTVFLLMPQFLLVGAGEAFTYMGQLDFFLRECPKGMKTMSTGLFLSTCAIGFFFSTLLVTIVHKVTGHGARGGGWLADNLDDGRLDYFYWLLAVISAINLVLFTVAARGYVYKEKRLADAGIELADEETIAVGH*