Gene Details:
- MSU gene ID: LOC_Os10g39980
- RAPdb gene ID: Os10g0547500
- Gene Symbol: Lsi3
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- Similar to Lsi6, knockout of Lsi2 and Lsi3 also resulted in decreased distribution of Si to the panicles but increased Si to the flag leaf.
- Lsi3 was located in the parenchyma tissues between enlarged vascular bundles and diffuse vascular bundles.
- Orchestration of three transporters and distinct vascular structures in node for intervascular transfer of silicon in rice.
Function-related keywords:
Literature:
- Orchestration of three transporters and distinct vascular structures in node for intervascular transfer of silicon in rice . DOI: 10.1073/pnas.1508987112 ; PMID: 26283388
Related News:
Gene Resources:
- NCBI ID: LC069370
- UniProt accessions:
Sequences:
cDNA Sequence
- >LOC_Os10g39980.1
ACTCTCATCGCCACCACCACCTCCCACTCCAAGACGCTAGCTGCATTGTAGTGAGAGAGAGAGGCGGCCATGGCGCTGGCGTCGCTGCCGAAGGTGGTGATGGGGTCGGTGGCGTTCGGTGTGTTCTGGATGCTGGCGGTGTTCCCGTCGGTGCCGTTCCTGCCGATCGGGCGGACGGCGGGGGCGCTGCTGGGCGCGGTGCTGATGATCGTGTTCCACGTGATCAGCGCCGACGACGCCTACGCCTCCATCGACCTCCCCATCCTGGGCCTCCTCTTCGCCACCATGGTCGTCGGCGGCTACCTCAAGAACGCCGGCATGTTCAGGCACCTGGGCCGGCTGCTGGCGTGGCGGAGCCAGGGCGGGCGCGACCTCATGTGCCGCGTCTGCGTCGTCACCGCGCTCGCCAGCGCGCTCTTCACCAACGACACCTGCTGCGTCGTCCTCACCGAGTTCGTGCTCGAGCTCGCCGCCGAGCGCAACCTCCCGGCGAAGCCGTTCCTGCTCGCGCTCGCCACCAGCGCCAACATCGGCTCCAGCGCGACGCCCATCGGCAACCCGCAGAACCTGGTCATCGCCTTCAACAGCAAGATCTCCTTTATTTCCTTCCTCCTCGGCATCCTCCCCGCCATGCTCGCCGGCATGGGGATCAACATGCTCATGCTGCTCTGCATGTACTGGAAGGAGCTCGACGGCGGCGCCTGCAGCCCCGACGAGGTCGCCGCCGGCAAGCAGATGGAGGCCATCGAGGAGGGCCGCCGCACGGCGCTCAACAACAACAAGAAAGACGACGGCGACGCCGCCACCCCCGCATCGCCGGAGGACGACGACGGCGGCGACGCCGAGTCGATGATGTCGGAGAACATCTCGACGAAGCACCGGTGGTTCATGCAGTGCTCGGAGCACCGGCGGAAGCTGTTCCTCAAGAGCTTCGCGTACGTGGTCACCGTCGGCATGCTCGTCGCCTACATGCTCGGCCTCAACATGTCGTGGACCGCCATCACGACCGCCATCGCCCTCGTCGTCGTCGACTTCCGCGACGCCGAGCCATGCCTCGACAAGGTGTCGTACTCGCTGCTGGTGTTCTTCTCGGGGATGTTCGTGACGGTGAGCGGGTTCAACAAGACGGGGCTACCCGGGGCCATCTGGAACGTGATGGCGCCCTACTCAAAGATCAACCACGTCACCGGCGTCACCGTCCTCTCCGTCATCATCCTCCTCCTCTCCAACCTCGCCTCCAACGTCCCCACCGTGTTGTTGATGGGGGATGAGGTGGCGGCGGCGGCGGCGACGATATCACCGGCGGCGGTGACGCGGTCGTGGCTGCTGCTGGCGTGGGTGAGCACGGTGGCGGGGAACCTGTCGCTGCTGGGGTCGGCGGCGAACCTGATCGTGTGCGAGCAGGCGAGGCGGGCGACGCGCAACGCCTACGACCTCACCTTCTGGAACCACGTCATCTTCGGACTCCCATCCACCCTCGTCGTCACCGCCATCGGCATCCCTCTCATCGGCAAGATCAACATCTAGTATTCATTAAATTAATTAATTAATATAATCCGGCTAGCTACTATCTACAACGATCAGAAGAAGGCAGAATGATCGAGCATGCAAGAATTCATGCAAATTACAAGGGATGTGATATGATCATATTAATCCAAGGAAGCTAGTATGATGATTAAGTTTGTGATCAAGCCGTACTATGTGCATGCCAATGCATGCATGTGTTCAAGTGTACACTATGCTTGGTCTCAAGTGGATCAATTATATTGGTGCCATGCTCTGGGATAATTAGTTAATTAGTACTTATGATAAGCTAGAGAGGAGGATGCATTATATTGGTGCATGGTAATAAGGCAAATGAACAGCAGAATGCATGTATATATGTACTGTATCCCTGTTGCCAGCTGGTCTCTGTTTGAATGAAGTTGATAGCAACAAAGCTAGCACTAGCGAATGAGCTAGTGACTCAAGTACGCATGCCGGATTACCTCATTGCTCCAAACTTGCAATCAGTTTTGAACTTTTAATAAAGTTAATTTGGCTTTGTGCACTTGTCAATTTGCTCCCTCTTTGTTTAACCGATCTTGCCTAGTGCGTACGTAGCTAGATTGCACATTTAAG
CDS Sequence
- >LOC_Os10g39980.1
ATGGCGCTGGCGTCGCTGCCGAAGGTGGTGATGGGGTCGGTGGCGTTCGGTGTGTTCTGGATGCTGGCGGTGTTCCCGTCGGTGCCGTTCCTGCCGATCGGGCGGACGGCGGGGGCGCTGCTGGGCGCGGTGCTGATGATCGTGTTCCACGTGATCAGCGCCGACGACGCCTACGCCTCCATCGACCTCCCCATCCTGGGCCTCCTCTTCGCCACCATGGTCGTCGGCGGCTACCTCAAGAACGCCGGCATGTTCAGGCACCTGGGCCGGCTGCTGGCGTGGCGGAGCCAGGGCGGGCGCGACCTCATGTGCCGCGTCTGCGTCGTCACCGCGCTCGCCAGCGCGCTCTTCACCAACGACACCTGCTGCGTCGTCCTCACCGAGTTCGTGCTCGAGCTCGCCGCCGAGCGCAACCTCCCGGCGAAGCCGTTCCTGCTCGCGCTCGCCACCAGCGCCAACATCGGCTCCAGCGCGACGCCCATCGGCAACCCGCAGAACCTGGTCATCGCCTTCAACAGCAAGATCTCCTTTATTTCCTTCCTCCTCGGCATCCTCCCCGCCATGCTCGCCGGCATGGGGATCAACATGCTCATGCTGCTCTGCATGTACTGGAAGGAGCTCGACGGCGGCGCCTGCAGCCCCGACGAGGTCGCCGCCGGCAAGCAGATGGAGGCCATCGAGGAGGGCCGCCGCACGGCGCTCAACAACAACAAGAAAGACGACGGCGACGCCGCCACCCCCGCATCGCCGGAGGACGACGACGGCGGCGACGCCGAGTCGATGATGTCGGAGAACATCTCGACGAAGCACCGGTGGTTCATGCAGTGCTCGGAGCACCGGCGGAAGCTGTTCCTCAAGAGCTTCGCGTACGTGGTCACCGTCGGCATGCTCGTCGCCTACATGCTCGGCCTCAACATGTCGTGGACCGCCATCACGACCGCCATCGCCCTCGTCGTCGTCGACTTCCGCGACGCCGAGCCATGCCTCGACAAGGTGTCGTACTCGCTGCTGGTGTTCTTCTCGGGGATGTTCGTGACGGTGAGCGGGTTCAACAAGACGGGGCTACCCGGGGCCATCTGGAACGTGATGGCGCCCTACTCAAAGATCAACCACGTCACCGGCGTCACCGTCCTCTCCGTCATCATCCTCCTCCTCTCCAACCTCGCCTCCAACGTCCCCACCGTGTTGTTGATGGGGGATGAGGTGGCGGCGGCGGCGGCGACGATATCACCGGCGGCGGTGACGCGGTCGTGGCTGCTGCTGGCGTGGGTGAGCACGGTGGCGGGGAACCTGTCGCTGCTGGGGTCGGCGGCGAACCTGATCGTGTGCGAGCAGGCGAGGCGGGCGACGCGCAACGCCTACGACCTCACCTTCTGGAACCACGTCATCTTCGGACTCCCATCCACCCTCGTCGTCACCGCCATCGGCATCCCTCTCATCGGCAAGATCAACATCTAG
Protein Sequence
- >LOC_Os10g39980.1
MALASLPKVVMGSVAFGVFWMLAVFPSVPFLPIGRTAGALLGAVLMIVFHVISADDAYASIDLPILGLLFATMVVGGYLKNAGMFRHLGRLLAWRSQGGRDLMCRVCVVTALASALFTNDTCCVVLTEFVLELAAERNLPAKPFLLALATSANIGSSATPIGNPQNLVIAFNSKISFISFLLGILPAMLAGMGINMLMLLCMYWKELDGGACSPDEVAAGKQMEAIEEGRRTALNNNKKDDGDAATPASPEDDDGGDAESMMSENISTKHRWFMQCSEHRRKLFLKSFAYVVTVGMLVAYMLGLNMSWTAITTAIALVVVDFRDAEPCLDKVSYSLLVFFSGMFVTVSGFNKTGLPGAIWNVMAPYSKINHVTGVTVLSVIILLLSNLASNVPTVLLMGDEVAAAAATISPAAVTRSWLLLAWVSTVAGNLSLLGSAANLIVCEQARRATRNAYDLTFWNHVIFGLPSTLVVTAIGIPLIGKINI*