Information report for OsMADS56;GL10
Gene Details
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Functional Descriptions
- Overexpression of OsMADS56 (56OX) also resulted in delayed flowering under LD.
- These observations imply that OsMADS50 and OsMADS56 function antagonistically through OsLFL1-Ehd1 in regulating LD-dependent flowering.
- OsMADS50 and OsMADS56 function antagonistically in regulating long day (LD)-dependent flowering in rice.
- 8, OsMADS56 encoding a MADS-box transcription factor, was performed in this study.
- In these populations, decreased grain weight and size were associated with a reduction in the expression of OsMADS56.
- In transgenic populations of OsMADS56 driven by a strong constitutive promoter, grain weight and size of the positive plants were significantly higher than those of the negative plants.
- Cloning of OsMADS56 provides a new gene resource to improve grain weight and size through molecular design breeding.
- Control of Thousand-Grain Weight by OsMADS56 in Rice.
- GL10 regulates grain length by promoting greater longitudinal cell growth in the grain glume.
- 0-kb deletion in the first exon that abolishes its transcription, results in shorter grain length, lower grain weight and delayed flowering in GL10 plants.
- The knockout of GL10 in the HJX74 background leads to grain phenotypes similar to that of NIL-GL10, while overexpression of GL10 results in increased grain length and weight and earlier heading date.
- Our findings reveal an allelic variation of GL10 that may explain differences in grain length among modern cultivars and could be used to breed rice varieties with optimized grain shape.
- Additionally, GL10 participates in the regulation of gibberellic acid (GA) signaling pathway genes in young panicle tissues.
Functional Keywords
- flower , transcription-factor , grain , breeding , grain-weight , growth , grain-length , panicle , heading-date , signaling-pathway-gene , flowering , grain-shape
Literature and News
- A simple method for predicting the functional differentiation of duplicate genes and its application to MIKC-type MADS-box genes . DOI: 10.1093/nar/gni003 ; PMID: 15659573
- OsMADS50 and OsMADS56 function antagonistically in regulating long day (LD)-dependent flowering in rice . DOI: 10.1111/j.1365-3040.2009.02008.x ; PMID: 19558411
- Transcriptional and post-transcriptional regulation of heading date in rice . DOI: 10.1111/nph.17158 ; PMID: 33341945
- Control of Thousand-Grain Weight by OsMADS56 in Rice . DOI: 10.3390/ijms23010125 ; PMID: 35008551
- Natural variations in grain length 10 (GL10) regulate rice grain size . DOI: 10.1016/j.jgg.2022.01.008 ; PMID: 35151907
Gene Resources
- UniProt: P0C5B2
- EMBL: AC092697, AK070135, AP008216
- AlphaFoldDB: P0C5B2
- EnsemblPlants: Os10t0536100-01
- Gramene: Os10t0536100-01
- KEGG: dosa:Os10g0536100
- Orthologous matrix: KAYTKDH
- InterPro: IPR002100, IPR002487, IPR033896
Sequences
cDNA Sequence
- >LOC_Os10g39130.1
CACCTGGTGGTAGTGTTGGGGCGGGGCCTCGCCCACTTGTTCCTACGCCCCTTTCCGCGCGAGGAGGTGGGACGAGAGACGACGGCGATCCACGGCCAATGGCGATTGCCGGTCTCGGTCGGTCGCACTCGCGCTCGCGCGCGGGCGCCTCGTGGGTCGCGGGTTTCCCAGGACGGGAAGTCGCTCGCGCGGTCGCCTTCTTTATTTGGCTACCTCCTCCTCCTCTCCCCTCCCCACCCATCTCGCCCTCGTCTCGTCTCGTCTCTCCACTCCCCCACCTCCCATCCGCTACTGCTAGTACTACTACTACCCGGCCTCTCGCCTTCTCGCGCGGCCGCGATTTCCGTTCGCAAATCCGCACCCACGGCGGCGCGAGGTCGCCGTCGTCGTCGAGCCATTTCGGGGGGGTAGTTTATAAGGGCTTGCGCGAGGAGGGGGAGGAGTAGCGGGTAGCGGCGGCTCGAGTCGAGTCGTCGTCGTCGTCGGCGGCGGCGGTCGAGAGAGATCGGGATCGATGGTGCGGGGGAGGACGGAGCTGAAGCGGATTGAGAACCCGACGAGCCGGCAGGTGACCTTCTCCAAGCGCCGGAATGGCCTCCTCAAGAAGGCGTTCGAGCTCTCCGTCCTCTGCGACGCCGAGGTCGCCCTCATCGTCTTCTCCCCCCGCGGCCGCCTCTACGAGTTCGCCAGCGCCCCCAGCCTACAGAAAACCATCGACCGCTATAAAGCATACACAAAGGATCATGTCAACAATAAGACAATTCAACAAGATATCCAGCAAGTCAAAGATGATACTTTAGGCTTGGCCAAGAAACTTGAAGCTCTTGATGAGTCCAGACGGAAAATATTGGGAGAAAATTTAGAAGGATTCTCTATTGAAGAACTGCGTGGTCTAGAAATGAAACTTGAGAAGAGCCTCCACAAGATAAGACTAAAGAAGACCGAGCTTCTGGAGCAGCAGATAGCCAAGCTGAAAGAGAAGGAGCGGACTTTGCTTAAAGACAACGAAAATTTACGCGGAAAGCATCGCAACCTTGAGGCTGCGGCGCTGGTGGCTAACCACATGACGACGACGACGGCGCCGGCGGCGTGGCCGCGGGACGTGCCTATGACGAGCAGCACAGCCGGCGCCGCCGACGCCATGGACGTGGAGACTGATCTGTACATTGGATTGCCCGGCACTGAGCGCTCCTCCAACCGGTCGGAGACAGGTTGAAGAAGGCCAGCCACAGCAACAGCTGCTATATAGCATGCAGTAGCAGCAACGACGCCAGTGACATCCTGTTCATCTCACAAGAATAACCAGAGCTCTACGCATGCGCACATGAAACCCAGGCATGCAGTTCTCGGTGGGTAAATTATTATCTCGCATTATTAGCTATATGCGTGTCCTTGTCTTTTTCTTTAGGCAATGGAATAAAATTTCCGGTAAGTACAAACACAAACGGAAACAAAGAATTAACAAAGCTGTAGCAGACCAGATCGGCAAATTGAAATGCCAGGTAATCCAGTATATATTTCGCTTCCAGCTGCCTCTACCCTCATATCTCACCTGCCTGTGTGTTTGTGTAAATTGAGCTTGCGAAAGAGGAAGGTAGATGCTGTTAATTTATGGGAGTGGAAGCTAAATGTTGTACTACTGGAGTACTGATTTGTAGCTGATCCAACTGCCACGAGTTTTGGGCGTCG - >LOC_Os10g39130.2
CACCTGGTGGTAGTGTTGGGGCGGGGCCTCGCCCACTTGTTCCTACGCCCCTTTCCGCGCGAGGAGGTGGGACGAGAGACGACGGCGATCCACGGCCAATGGCGATTGCCGGTCTCGGTCGGTCGCACTCGCGCTCGCGCGCGGGCGCCTCGTGGGTCGCGGGTTTCCCAGGACGGGAAGTCGCTCGCGCGGTCGCCTTCTTTATTTGGCTACCTCCTCCTCCTCTCCCCTCCCCACCCATCTCGCCCTCGTCTCGTCTCGTCTCTCCACTCCCCCACCTCCCATCCGCTACTGCTAGTACTACTACTACCCGGCCTCTCGCCTTCTCGCGCGGCCGCGATTTCCGTTCGCAAATCCGCACCCACGGCGGCGCGAGGTCGCCGTCGTCGTCGAGCCATTTCGGGGGGGTAGTTTATAAGGGCTTGCGCGAGGAGGGGGAGGAGTAGCGGGTAGCGGCGGCTCGAGTCGAGTCGTCGTCGTCGTCGGCGGCGGCGGTCGAGAGAGATCGGGATCGATGGTGCGGGGGAGGACGGAGCTGAAGCGGATTGAGAACCCGACGAGCCGGCAGGTGACCTTCTCCAAGCGCCGGAATGGCCTCCTCAAGAAGGCGTTCGAGCTCTCCGTCCTCTGCGACGCCGAGGTCGCCCTCATCGTCTTCTCCCCCCGCGGCCGCCTCTACGAGTTCGCCAGCGCCCCCAGCCTACAGAAAACCATCGACCGCTATAAAGCATACACAAAGGATCATGTCAACAATAAGACAATTCAACAAGATATCCAGCAAGTCAAAGATGATACTTTAGGCTTGGCCAAGAAACTTGAAGCTCTTGATGAGTCCAGACGGAAAATATTGGGAGAAAATTTAGAAGGATTCTCTATTGAAGAACTGCGTGGTCTAGAAATGAAACTTGAGAAGAGCCTCCACAAGATAAGACTAAAGAAGACCGAGCTTCTGGAGCAGCAGATAGCCAAGCTGAAAGAGAAGGAGCGGACTTTGCTTAAAGACAACGAAAATTTACGCGGAAAGCATCGCAACCTTGAGGCTGCGGCGCTGGTGGCTAACCACATGACGACGACGACGGCGCCGGCGGCGTGGCCGCGGGACGTGCCTATGACGAGCAGCACAGCCGGCGCCGCCGACGCCATGGACGTGGAGACTGATCTGTACATTGGATTGCCCGGCACTGAGCGCTCCTCCAACCGGTCGGAGACAGGTTGAAGAAGGCCAGCCACAGCAACAGCTGCTATATAGCATGCAGTAGCAGCAACGACGCCAGTGACATCCTGTTCATCTCACAAGAATAACCAGAGCTCTACGCATGCGCACATGAAACCCAGGCATGCAGTTCTCGGTGGGTAAATTATTATCTCGCATTATTAGCTATATGCGTGTCCTTGTCTTTTTCTTTAGGCAATGGAATAAAATTTCCGGTAAGTACAAACACAAACGGAAACAAAGAATTAACAAAGCTGTAGCAGACCAGATCGGCAAATTGAAATGCCAGGTAATCCAGTATATATTTCGCTTCCAGCTGCCTCTACCCTCATATCTCACCTGCCTGTGTGTTTGTGTAAATTGAGCTTGCGAAAGAGGAAGGTAGATGCTGTTAATTTATGGGAGTGGAAGCTAAATGTTGTACTACTGGAGTACTGATTTGTAGCTGATCCAACTGCCACGAGTTTTGGGCGTCG
CDS Sequence
- >LOC_Os10g39130.1
ATGGTGCGGGGGAGGACGGAGCTGAAGCGGATTGAGAACCCGACGAGCCGGCAGGTGACCTTCTCCAAGCGCCGGAATGGCCTCCTCAAGAAGGCGTTCGAGCTCTCCGTCCTCTGCGACGCCGAGGTCGCCCTCATCGTCTTCTCCCCCCGCGGCCGCCTCTACGAGTTCGCCAGCGCCCCCAGCCTACAGAAAACCATCGACCGCTATAAAGCATACACAAAGGATCATGTCAACAATAAGACAATTCAACAAGATATCCAGCAAGTCAAAGATGATACTTTAGGCTTGGCCAAGAAACTTGAAGCTCTTGATGAGTCCAGACGGAAAATATTGGGAGAAAATTTAGAAGGATTCTCTATTGAAGAACTGCGTGGTCTAGAAATGAAACTTGAGAAGAGCCTCCACAAGATAAGACTAAAGAAGACCGAGCTTCTGGAGCAGCAGATAGCCAAGCTGAAAGAGAAGGAGCGGACTTTGCTTAAAGACAACGAAAATTTACGCGGAAAGCATCGCAACCTTGAGGCTGCGGCGCTGGTGGCTAACCACATGACGACGACGACGGCGCCGGCGGCGTGGCCGCGGGACGTGCCTATGACGAGCAGCACAGCCGGCGCCGCCGACGCCATGGACGTGGAGACTGATCTGTACATTGGATTGCCCGGCACTGAGCGCTCCTCCAACCGGTCGGAGACAGGTTGA - >LOC_Os10g39130.2
ATGGTGCGGGGGAGGACGGAGCTGAAGCGGATTGAGAACCCGACGAGCCGGCAGGTGACCTTCTCCAAGCGCCGGAATGGCCTCCTCAAGAAGGCGTTCGAGCTCTCCGTCCTCTGCGACGCCGAGGTCGCCCTCATCGTCTTCTCCCCCCGCGGCCGCCTCTACGAGTTCGCCAGCGCCCCCAGCCTACAGAAAACCATCGACCGCTATAAAGCATACACAAAGGATCATGTCAACAATAAGACAATTCAACAAGATATCCAGCAAGTCAAAGATGATACTTTAGGCTTGGCCAAGAAACTTGAAGCTCTTGATGAGTCCAGACGGAAAATATTGGGAGAAAATTTAGAAGGATTCTCTATTGAAGAACTGCGTGGTCTAGAAATGAAACTTGAGAAGAGCCTCCACAAGATAAGACTAAAGAAGACCGAGCTTCTGGAGCAGCAGATAGCCAAGCTGAAAGAGAAGGAGCGGACTTTGCTTAAAGACAACGAAAATTTACGCGGAAAGCATCGCAACCTTGAGGCTGCGGCGCTGGTGGCTAACCACATGACGACGACGACGGCGCCGGCGGCGTGGCCGCGGGACGTGCCTATGACGAGCAGCACAGCCGGCGCCGCCGACGCCATGGACGTGGAGACTGATCTGTACATTGGATTGCCCGGCACTGAGCGCTCCTCCAACCGGTCGGAGACAGGTTGA
Protein Sequence
- >LOC_Os10g39130.1
MVRGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASAPSLQKTIDRYKAYTKDHVNNKTIQQDIQQVKDDTLGLAKKLEALDESRRKILGENLEGFSIEELRGLEMKLEKSLHKIRLKKTELLEQQIAKLKEKERTLLKDNENLRGKHRNLEAAALVANHMTTTTAPAAWPRDVPMTSSTAGAADAMDVETDLYIGLPGTERSSNRSETG* - >LOC_Os10g39130.2
MVRGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASAPSLQKTIDRYKAYTKDHVNNKTIQQDIQQVKDDTLGLAKKLEALDESRRKILGENLEGFSIEELRGLEMKLEKSLHKIRLKKTELLEQQIAKLKEKERTLLKDNENLRGKHRNLEAAALVANHMTTTTAPAAWPRDVPMTSSTAGAADAMDVETDLYIGLPGTERSSNRSETG*