Information report for OsTMS18
Gene Details
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Functional Descriptions
- Further analysis showed that the tapetal transcription factor OsMS188 directly regulates OsTMS18 for pollen wall formation.
- Cellular analysis revealed the pollen wall of OsTMS18 to be defective, leading to aborted pollen under high temperature.
- Under low temperature, the flawed pollen wall in OsTMS18 is sufficient to protect its microspore, allowing for development of functional pollen and restoring fertility.
- OsTMS18 sterility is more stable in summer than the TGMS line carrying the widely used locus tms5 in the ZH11 genetic background, suggesting its potential application for rice breeding.
- The OsTMS18 TGMS trait is caused by the point mutation from Gly to Ser in a glucose-methanol-choline (GMC) oxidoreductase; knockout of the oxidoreductase was previously reported to cause complete male sterility.
Functional Keywords
- transcription-factor , temperature , development , fertility , pollen , sterility , pollen-wall , breeding , tapetal , male-sterility
Literature and News
Gene Resources
- UniProt: Q8H094
- EMBL: AK101367, AK119563, AP014966
- AlphaFoldDB: Q8H094
- EnsemblPlants: Os10t0524500-01
- Gramene: Os10t0524500-01
- KEGG: osa:4349162
- Orthologous matrix: MTPNIPK
- InterPro: IPR000172, IPR007867, IPR012132
- PANTHER: PTHR45968, PTHR45968:SF6
- SUPFAM: SSF51905, SSF54373
- PROSITE: PS00624
- Gene3D: 3.30.410.40, 3.50.50.60
- OrthoDB: Q8H094
- SWISS-MODEL: Q8H094
- eggNOG: KOG1238
Sequences
cDNA Sequence
- >LOC_Os10g38050.1
ATTCAAGACATCTACTCTTGATCTACCATTGAGCTAACTCCGGATATATAAACAGACCGAACGTTTCGTCCCAGGGGAATGTGAAAGTTAGCGAATTTGCCCGGCGAAAATGGCAGCACTTGGCCGCGCGAGCTCGTCGGCGCCGGTGCTTGCCGCCGCCGCCGCCGTGCTCCTCTCGCTCTGCCTCGCCGCGCTCTCGGAAGAGCAAGAGCAACTGGAGAACCTGCGGTTCGTGCGGCACGCGCAGGACGCGCCGCTGGTGTCGAGCTACAACTACATCGTCATCGGCGGCGGCACGGCGGGGTGCCCGCTGGCGGCGACGCTGTCGGAGCACTCGCGCGTGCTGCTGCTGGAGCGCGGCGGCCTGCCGTACGCCAACATGTCGAGCGAGCAGCACTTCACGGACGCGCTGGCCGACACGTCGCCGGCGTCGCCGGCGCAGCGGTTCATCTCGGAGGACGGCGTGGTGAACGCCCGGGCGCGGGTGCTCGGCGGCGGGAGCTGCCTCAACGCCGGGTTCTACACGCGGGCGAGCAACGAGTACGTGCGCGCCTCCGGGTGGGACGCGCGGCTGGTGAACTCGTCGTACCGGTGGGTGGAGCGCTCGCTGGTGTTCCGCCCCGACGTGCCGCCGTGGCAGGCGGCGCTCCGCGACGCGCTGCTCGAGGTCGGCGTCACGCCCGACAACGGCTTCACCTTCGACCACGTCACCGGCACCAAGATCGGCGGCACCATCTTCGACAACTCCGGCCAGCGCCACACCGCCGCCGACTTCCTCCGCCACGCCCGCCCCCGCGGCCTCACCGTCCTCCTCTACGCCACCGTCTCCCGTATCCTCTTCAAAAGCCAAGACGGGGTGCCGTACCCGGTGGCGTACGGGGTGGTGTTCTCGGACCCGCTGGGGGTGCAGCACCGGGTGTACCTCCGCGACGGCGACAAGAACGAGGTGATCGTGTCGGCGGGGACGCTGGGGAGCCCGCAGCTGCTGATGCTGAGCGGCGTCGGGCCGCAGGCGCACCTGGAGGCGCACGGCATCGAGGTGATCGTGGACCAACCCATGGTCGGGCAGGGCGTCGCCGACAACCCGATGAACTCGGTGTTCATCCCGTCGCCGGTGCCGGTGGAGCTCTCCCTGGTGCAGGTCGTCGGCATCACCCGCTCCGGCAGCTTCATCGAGGGGGTGAGCGGGTCGGAGTTCGGCATGCCGGTGTCGGACGGCGCGCTCCGGTGGGCGCGCAGCTTCGGGATGCTGTCGCCGCAGACGGGGCAGCTCGGCACGCTGCCGCCGAAGCAGAGGACGCCGGAGGCGCTGCAGCGGGCGGCGGAGGCGATGATGCGGCTGGACAGGAGGGCGTTCCGGGGAGGCTTCATCCTGGAGAAGATCCTCGGGCCGGTGTCCTCCGGCCACGTCGAGCTGCGAACCACCGACCCGAGGGCGAACCCGTCGGTGACGTTCAACTACTTCCGCGAGGCAGAGGATCTGGAGCGGTGCGTCCATGGCATCGAGACGATCGAGCGGGTGATCCAGTCGCGGGCCTTCTCCAACTTCACCTACGCCAACGCCTCCGTCGAGTCCATCTTCACCGATTCCGCCAACTTCCCCGTCAACCTGCTGCCGCGCCATGTCAACGACTCGCGCTCGCCGGAGCAGTACTGCATGGACACCGTCATGACCATCTGGCACTACCACGGCGGCTGCCATGTCGGCGCCGTCGTCGACGACGATTACCGGGTGTTCGGGGTGCAGGGGCTCAGGGTGATCGACAGCTCCACCTTCAAGTACTCCCCCGGCACCAACCCTCAGGCCACCGTCATGATGCTCGGCAGGTATATGGGTGTGAAGATTCAGTCCGAGAGATGGAAGAAATGATGAACAAAAGATAATTTCGTTTCAGGAGCAAAAAAATGCATGTAATTCAAGGAAAAGAAAATGTTCAACTGTCTTTAGAGTTTAGAGTAGATTTTATTTGCACCCACTTAATTTTTACTCTTCTCTAGACATAGGTTCAGTATCTGCTTGTTGATTATGTAACCTTGAAGAAGCATTGCAAAAACAAAGCGGAAACTTATGTTACCAAGGGCATGACGAAGAAATAAATGGATTAGATTTCATTGACACTTAGAAAATGGAACCAGCAAATCAAGGCTGAAAATAATTACACTAGAAACTTATTTTAATGGCTTTACATGTCGCTACATACTTAAATCAATCAAAGTTGCTACCAAAGCCATGTTCCCTAAACAGAGGGTTCCGGGCTTTCAAACATTCTTAATCTTCTATACATTGATAAAAAGTATACATAAAAAGAAAACCTATTAAGATGGAAATGTTGAATTCTCTTAAGAAAGGCATAAAAAATGCAGGGTAATAACCTTTTCTTGTCATGTCCTACTTGGTTTCAACCTATATTGCTAGCAAAATTTTCACGCTATCTATAACCTCAGGAAGCAGAATAGCTCAGAATCACTAGCAATTGTATACTTACAGATAATCGAAATTCATATTGTGAGGTTTTCTTGGATGGCTCGGAATGATCCACAGATGTTACCACCCATGTCTGGGAATGACGTACATCCTGGCAAGGGTTTCACCTTGCCCTTACGGTCAACACTTACAGGGTACTTCATTAGGTGGCCTCTCATCTCAGTCACCTCATTATCAACAAATCGTTCCCAGTTCTGTTCACCGATTTGGCGAACTCGTCTCATGCATTCCATGGTCTCTGGATAGTTGAAGCCTTCCTCAACCACTCCAATATGCTCCGCCCAAAGAGACATTCTGTAC
CDS Sequence
- >LOC_Os10g38050.1
ATGGCAGCACTTGGCCGCGCGAGCTCGTCGGCGCCGGTGCTTGCCGCCGCCGCCGCCGTGCTCCTCTCGCTCTGCCTCGCCGCGCTCTCGGAAGAGCAAGAGCAACTGGAGAACCTGCGGTTCGTGCGGCACGCGCAGGACGCGCCGCTGGTGTCGAGCTACAACTACATCGTCATCGGCGGCGGCACGGCGGGGTGCCCGCTGGCGGCGACGCTGTCGGAGCACTCGCGCGTGCTGCTGCTGGAGCGCGGCGGCCTGCCGTACGCCAACATGTCGAGCGAGCAGCACTTCACGGACGCGCTGGCCGACACGTCGCCGGCGTCGCCGGCGCAGCGGTTCATCTCGGAGGACGGCGTGGTGAACGCCCGGGCGCGGGTGCTCGGCGGCGGGAGCTGCCTCAACGCCGGGTTCTACACGCGGGCGAGCAACGAGTACGTGCGCGCCTCCGGGTGGGACGCGCGGCTGGTGAACTCGTCGTACCGGTGGGTGGAGCGCTCGCTGGTGTTCCGCCCCGACGTGCCGCCGTGGCAGGCGGCGCTCCGCGACGCGCTGCTCGAGGTCGGCGTCACGCCCGACAACGGCTTCACCTTCGACCACGTCACCGGCACCAAGATCGGCGGCACCATCTTCGACAACTCCGGCCAGCGCCACACCGCCGCCGACTTCCTCCGCCACGCCCGCCCCCGCGGCCTCACCGTCCTCCTCTACGCCACCGTCTCCCGTATCCTCTTCAAAAGCCAAGACGGGGTGCCGTACCCGGTGGCGTACGGGGTGGTGTTCTCGGACCCGCTGGGGGTGCAGCACCGGGTGTACCTCCGCGACGGCGACAAGAACGAGGTGATCGTGTCGGCGGGGACGCTGGGGAGCCCGCAGCTGCTGATGCTGAGCGGCGTCGGGCCGCAGGCGCACCTGGAGGCGCACGGCATCGAGGTGATCGTGGACCAACCCATGGTCGGGCAGGGCGTCGCCGACAACCCGATGAACTCGGTGTTCATCCCGTCGCCGGTGCCGGTGGAGCTCTCCCTGGTGCAGGTCGTCGGCATCACCCGCTCCGGCAGCTTCATCGAGGGGGTGAGCGGGTCGGAGTTCGGCATGCCGGTGTCGGACGGCGCGCTCCGGTGGGCGCGCAGCTTCGGGATGCTGTCGCCGCAGACGGGGCAGCTCGGCACGCTGCCGCCGAAGCAGAGGACGCCGGAGGCGCTGCAGCGGGCGGCGGAGGCGATGATGCGGCTGGACAGGAGGGCGTTCCGGGGAGGCTTCATCCTGGAGAAGATCCTCGGGCCGGTGTCCTCCGGCCACGTCGAGCTGCGAACCACCGACCCGAGGGCGAACCCGTCGGTGACGTTCAACTACTTCCGCGAGGCAGAGGATCTGGAGCGGTGCGTCCATGGCATCGAGACGATCGAGCGGGTGATCCAGTCGCGGGCCTTCTCCAACTTCACCTACGCCAACGCCTCCGTCGAGTCCATCTTCACCGATTCCGCCAACTTCCCCGTCAACCTGCTGCCGCGCCATGTCAACGACTCGCGCTCGCCGGAGCAGTACTGCATGGACACCGTCATGACCATCTGGCACTACCACGGCGGCTGCCATGTCGGCGCCGTCGTCGACGACGATTACCGGGTGTTCGGGGTGCAGGGGCTCAGGGTGATCGACAGCTCCACCTTCAAGTACTCCCCCGGCACCAACCCTCAGGCCACCGTCATGATGCTCGGCAGGTATATGGGTGTGAAGATTCAGTCCGAGAGATGGAAGAAATGA
Protein Sequence
- >LOC_Os10g38050.1
MAALGRASSSAPVLAAAAAVLLSLCLAALSEEQEQLENLRFVRHAQDAPLVSSYNYIVIGGGTAGCPLAATLSEHSRVLLLERGGLPYANMSSEQHFTDALADTSPASPAQRFISEDGVVNARARVLGGGSCLNAGFYTRASNEYVRASGWDARLVNSSYRWVERSLVFRPDVPPWQAALRDALLEVGVTPDNGFTFDHVTGTKIGGTIFDNSGQRHTAADFLRHARPRGLTVLLYATVSRILFKSQDGVPYPVAYGVVFSDPLGVQHRVYLRDGDKNEVIVSAGTLGSPQLLMLSGVGPQAHLEAHGIEVIVDQPMVGQGVADNPMNSVFIPSPVPVELSLVQVVGITRSGSFIEGVSGSEFGMPVSDGALRWARSFGMLSPQTGQLGTLPPKQRTPEALQRAAEAMMRLDRRAFRGGFILEKILGPVSSGHVELRTTDPRANPSVTFNYFREAEDLERCVHGIETIERVIQSRAFSNFTYANASVESIFTDSANFPVNLLPRHVNDSRSPEQYCMDTVMTIWHYHGGCHVGAVVDDDYRVFGVQGLRVIDSSTFKYSPGTNPQATVMMLGRYMGVKIQSERWKK*