Information report for OsNIP3;1;DTE1
Gene Details
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Functional Descriptions
- OsNIP3;1, a rice boric acid channel, regulates boron distribution and is essential for growth under boron-deficient conditions.
- GFP-tagged OsNIP3;1 expressed in tobacco BY2 cells was localized to the plasma membrane.
- Promoter-GUS analysis suggested that OsNIP3;1 is expressed mainly in exodermal cells and steles in roots, as well as in cells around the vascular bundles in leaf sheaths and pericycle cells around the xylem in leaf blades.
- These data provide evidence that DTE1 is critical for vegetative growth and reproductive development in rice grown under B-deficient conditions.
- Map-based cloning revealed that DTE1 encodes a NOD26-LIKE INTRINSIC PROTEIN orthologous to known B channel proteins AtNIP5;1 in Arabidopsis and TASSEL-LESS1 in maize.
- Subcellular localization showed DTE1 is mainly localized in the plasma membrane.
- OsNIP3;1 was polarly localized at the xylem parenchyma cells of enlarged vascular bundles of nodes facing toward the xylem vessels.
- These results indicate that OsNIP3;1 located in the nodes is involved in the preferential distribution of B to the developing tissues by unloading B from the xylem in rice and that it is regulated at both transcriptional and protein level in response to external B level.
Functional Keywords
- boron , boric-acid , boron-distribution , growth , plasma-membrane , exodermal-cells , steles , root , sheath , leaf , development , map-based-cloning , vegetative , reproductive , reproductive-development , xylem , vascular-bundle , xylem-parenchyma
Literature and News
- OsNIP3;1, a rice boric acid channel, regulates boron distribution and is essential for growth under boron-deficient conditions . DOI: 10.1111/tpj.12511 ; PMID: 24654769
- Dwarf and tiller-enhancing 1 regulates growth and development by influencing boron uptake in boron limited conditions in rice . DOI: 10.1016/j.plantsci.2015.03.015 ; PMID: 26025517
- Preferential Distribution of Boron to Developing Tissues Is Mediated by the Intrinsic Protein OsNIP3 . DOI: 10.1104/pp.17.01641 ; PMID: 29217595
Gene Resources
- UniProt: Q0IWF3
- EMBL: AC068924, AP008216, AP014966
- AlphaFoldDB: Q0IWF3
- EnsemblPlants: Os10t0513200-01
- Gramene: Os10t0513200-01
- KEGG: dosa:Os10g0513200
- InterPro: IPR000425, IPR022357, IPR023271
- PANTHER: PTHR45724, PTHR45724:SF11
Sequences
cDNA Sequence
- >LOC_Os10g36924.1
GGGAGATACCTCGCTAGCAGTGGACGCCATTGACCTCGATCCATCGCCTCATGTGCGCACACTACGCCTATATACAGTCGCACCACACACAGCTACCTCCACCACCCAACCCCCCAAACACCTAGCTCACTGCATCTTCTTCCTCCTCCTCCTGATCAAATTAATCATCGTCTCCTCCATTGCATTCTTGCATCCATCCATCTAGCTAGTTAGTGTTGTTCTTGTTCGTGTTCTTGTTCTTGATGTGCATTGATCTTTCTTCTCTATTGATCTAATTGTTCTTAGATTGAGAGTGAAGTTGTGAGAGAGCTGGACACCATTTCTCTCATCAATATCCCTTAGCCAAACCTTGAGAAAAGCCTGTGAAGCATGTAAGAACACACCAGTTTGTTCCATCCAAACCCAACCCAAAAAAGCACCAAAAAAAAGGTCATCAGTTCCAAGTCCCAAAAGCATTGTTCTTTCATAACTAGGCATCTCGGTTAATTAGGGTGGATATTCCTCCACTAATCCCTTAGCGAAAAATCTACAAAAACCACTAGATCATGTAATTTTCGGCGAAATCATTCCACCCCCAGCTGAAGAAAAAAAAACAAAAAAAATATAGGCCAAGAGAATCATATTCCAGCATGCATCGTTAGCTAGTAGCCATCATCTCAGTCGCAGTCCGGTAGTAATACTGGACACAATCCTCCCATTGCTGTAGCATTTACCTCTGCAAAAGCCATCAAATCATGTAATTAGTAGCTAAAAACCCATCCTATTTCTACCTCATCATTCGCCTGAAAAGAGAAAAAAACAAGAACAAAAAAAAAAAGAAGTTGCAAGAAGAGGAGAGCAAGAAAGAGTTGATATATTAATGGAGATGGCGGCGCCGAACGGGGGCGGCGCGGCGGGGATGTCGTCGCCGGTGAACGGGGCGTCGGCGCCGGCGACGCCGGGGACGCCGGCGCCGCTGTTCGCGGGGCCGCGGGTGGACTCGCTGTCGTACGAGCGCAAGTCGATGCCGCGGTGCAAGTGCCTGCCGGCGGCGGTGGCGGAGGCGTGGGCGCCGTCGGCGCACGGCTGCGTCGTGGAGATCCCGGCGCCGGACGTCTCGCTCACCCGCAAGCTTGGAGCGGAGTTCGTGGGGACGTTCATCCTCATCTTCTTCGCGACGGCGGCGCCGATCGTGAACCAGAAGTACGGCGGCGCGATCTCGCCGTTCGGGAACGCGGCGTGCGCGGGGCTCGCCGTGACGACCATCATCCTGTCGACGGGGCACATCTCCGGCGCCCACCTCAACCCGTCGCTCACCATCGCCTTCGCCGCGCTCCGCCACTTCCCGTGGCTGCAGGTCCCGGCGTACGTCGCCGTCCAGGTGCTCGGCTCCATCTGCGCCGGCTTCGCCCTCAAGGGCGTCTTCCACCCCTTCCTCTCCGGCGGCGTCACCGTCCCCGACCCCACCATCTCCACCGCCCAGGCCTTCTTCACCGAGTTCATCATCACCTTCAACCTCCTCTTCGTCGTCACCGCCGTCGCCACCGACACCCGCGCCGTCGGCGAGCTCGCCGGCATCGCCGTCGGCGCCGCCGTCACCCTCAACATCCTCATCGCCGGGCCGACGACAGGAGGGTCGATGAACCCGGTGAGGACGCTGGGGCCGGCGGTGGCGGCGGGCAACTACCGGCAGCTGTGGATATACCTGATCGCGCCGACGCTGGGCGCGGTCGCCGGCGCCGGCGTGTACACGGCGGTGAAGCTCCGCGACGAGAACGGCGAGACCCCGCGCCCCCAGCGCAGCTTCCGCCGCTGATCCAAATCATATCCAAATCCATATCCATAAAAACAAATTATTATACACGACGTAGTTAACCTGAACAAATTATATGGCTTCCAATTAAAAAAAAATCAGTCGTGTCATCCTTGGGCCTTGTTCCACATGGGCCGAACACCAAGAGAAATCCGCGTGAATATGGGCCGTGATTTTGGTTGAAAATTTTCGGTCCATTCACGTAGATGGGCCGGGTTTGAGGCCTTTTCAAATGAGACCTTGGGGGCGTGTAATAAACCCCGTTTTGCTTCGTCCAGAACGGCAGAGTATAATAGTTCGAGTTGTGTGTGATGTGTCAGAACTCAGAATAAAAATGCACGCCGATGCACCGGGGTGATGGGCATCTTGCTGTGCGAATGGTGTAAGGTTTTATTTAATTTCCTATTTGACAAATTGTGTAATTTTCCCTGTTCCGACATTGATAATTGAGAAAAATTGTCCCAAAAACTGCGTAGCCAACTGTCAGTGAGACGTTAACAAAA
CDS Sequence
- >LOC_Os10g36924.1
ATGGAGATGGCGGCGCCGAACGGGGGCGGCGCGGCGGGGATGTCGTCGCCGGTGAACGGGGCGTCGGCGCCGGCGACGCCGGGGACGCCGGCGCCGCTGTTCGCGGGGCCGCGGGTGGACTCGCTGTCGTACGAGCGCAAGTCGATGCCGCGGTGCAAGTGCCTGCCGGCGGCGGTGGCGGAGGCGTGGGCGCCGTCGGCGCACGGCTGCGTCGTGGAGATCCCGGCGCCGGACGTCTCGCTCACCCGCAAGCTTGGAGCGGAGTTCGTGGGGACGTTCATCCTCATCTTCTTCGCGACGGCGGCGCCGATCGTGAACCAGAAGTACGGCGGCGCGATCTCGCCGTTCGGGAACGCGGCGTGCGCGGGGCTCGCCGTGACGACCATCATCCTGTCGACGGGGCACATCTCCGGCGCCCACCTCAACCCGTCGCTCACCATCGCCTTCGCCGCGCTCCGCCACTTCCCGTGGCTGCAGGTCCCGGCGTACGTCGCCGTCCAGGTGCTCGGCTCCATCTGCGCCGGCTTCGCCCTCAAGGGCGTCTTCCACCCCTTCCTCTCCGGCGGCGTCACCGTCCCCGACCCCACCATCTCCACCGCCCAGGCCTTCTTCACCGAGTTCATCATCACCTTCAACCTCCTCTTCGTCGTCACCGCCGTCGCCACCGACACCCGCGCCGTCGGCGAGCTCGCCGGCATCGCCGTCGGCGCCGCCGTCACCCTCAACATCCTCATCGCCGGGCCGACGACAGGAGGGTCGATGAACCCGGTGAGGACGCTGGGGCCGGCGGTGGCGGCGGGCAACTACCGGCAGCTGTGGATATACCTGATCGCGCCGACGCTGGGCGCGGTCGCCGGCGCCGGCGTGTACACGGCGGTGAAGCTCCGCGACGAGAACGGCGAGACCCCGCGCCCCCAGCGCAGCTTCCGCCGCTGA
Protein Sequence
- >LOC_Os10g36924.1
MEMAAPNGGGAAGMSSPVNGASAPATPGTPAPLFAGPRVDSLSYERKSMPRCKCLPAAVAEAWAPSAHGCVVEIPAPDVSLTRKLGAEFVGTFILIFFATAAPIVNQKYGGAISPFGNAACAGLAVTTIILSTGHISGAHLNPSLTIAFAALRHFPWLQVPAYVAVQVLGSICAGFALKGVFHPFLSGGVTVPDPTISTAQAFFTEFIITFNLLFVVTAVATDTRAVGELAGIAVGAAVTLNILIAGPTTGGSMNPVRTLGPAVAAGNYRQLWIYLIAPTLGAVAGAGVYTAVKLRDENGETPRPQRSFRR*