Gene Details:

Functional Descriptions:

  • To understand the molecular mechanism that regulates the starch biosynthesis in rice grains, we characterized a classic rice mutant dull endosperm1 (Du1) and isolated Du1 through a map-based cloning approach.
  • Du1, encoding a member of pre-mRNA processing (Prp1) family, is expressed mainly in panicles.
  • Du1 specifically affects the splicing efficiency of Wx(b) and regulates starch biosynthesis by mediating the expression of starch biosynthesis genes.
  • These results strongly suggest that Du1 may function as a regulator of the starch biosynthesis by affecting the splicing of Wx(b) and the expression of other genes involved in the rice starch biosynthetic pathways.
  • Du1, encoding a novel Prp1 protein, regulates starch biosynthesis through affecting the splicing of Wxb pre-mRNAs in rice (Oryza sativa L.).

Literature:

Gene Resources:

Sequences:

cDNA Sequence
  • >LOC_Os10g35550.1
    ATTCTTCCTCACGACCTCAAAAACCCAAACCAATCTACTCCGCCGCCGCCGCCGCGATGGTGTTCGTCCGCGCGCCGGACGGGAGGACCCACCACGTCGACCTCGACCCCTCCACCGCCACGCTCGCCGACCTCACGGCCTCCGCCTCCCGCGTCTGCGGCGGCGTCCCGCCGGAGCAGCTGCGGCTCTACCTCGCCCACCGCCGCCTCCTCCCGGCCGAGCCGTCCCCGCTGCTGTCCTCCCTCCGGGTCTCGGCCTCCTCCTCCCTGCTACTCCACCTCCCCCTGCTCGGAGGGATGACCGGCCCGACGACGACCCCCGCGGCACCCCCGCCCCCGCCGCCGCCGTCGGCGCAGCCGCCCGCCCGCCCCGCGCGCTACGACTTCCTCAACTCCAAGCCGCCCCCGAACTACGTGGCCGGTCTGGGGCGTGGCGCCACCGGGTTCACCACCCGTTCGGATATCGGGCCGGCCCGCGCGGCGCCCGATCTGCCTGACCGGTCCGCCGCCGCCGCCGCCGCCCCCGCCGTCGGGCGCGGCCGTGGGAAGCCACCCGGGGACGACGACGGCGACGACGATGGCGGCGACGAGGAGAAGGGGTACGACGAGAACCAGAAGTTCGACGAGTTCGAGGGCAACGACGCCGGGCTGTTCTCCAACGCCGACTACGACGACGACGACCGCGAGGCGGATGCGGTCTGGGAGAGCATCGACCAGAGGATGGACTCTCGCCGGAAGGATCGGCGGGAGGCGCGGCTGAAGCAGGAGATCGAGAAGTACCGTGCTTCCAACCCTAAGATCACCGAGCAATTCGCTGATTTGAAGCGTAAGTTGGTCGATTTGTCGGCGCAGGAGTGGGAAAGCATACCTGAAATTGGGGACTACTCGCTGCGCAACAAGAAGAAGCGATTTGAGAGCTTCGTTCCCGTGCCGGACACCCTGCTCGAGAAGGCTCGGCAGGAGCAGGAGCATGTCACGGCACTGGATCCCAAGAGCCGTGCAGCTGGTGGCACCGAGACGCCATGGGCGCAGACTCCGGTTACCGATCTGACGGCTGTGGGCGAAGGTCGTGGCACCGTGCTCTCCTTGAAGCTGGACAGGTTGTCGGATTCGGTATCTGGTCTTACTGTTGTTGATCCAAAGGGTTACTTGACGGACCTGAAAAGTATGAAGATTACTAGTGATGCTGAGATTTCTGACATTAAAAAGGCGCGATTGTTGCTTAAGTCAGTGACACAGACAAACCCGAAGCATCCACCAGGATGGATTGCTGCTGCTAGGCTTGAAGAGGTTGCTGGCAAGCTTCAGGTTGCTCGGCAGCTTATCCAGCGTGGCTGTGAGGAGTGCCCCACAAATGAGGATGTTTGGGTCGAGGCATGCCGGCTGGCCAGCCCAGACGAGGCAAAGGCAGTGATTGCTAGGGGCGTGAAGGCAATTCCCAATTCTGTGAAGCTGTGGTTGCAGGCAGCAAAGTTGGAAACTAGTGATTTGAATAAGAGCAGGGTTTTGAGAAAAGGGTTGGAACACATTCCTGATTCAGTCAGACTGTGGAAAGCAGTAGTAGAGCTTGCAAATGAGGAGGATGCAAGACTGTTGCTTCACAGGGCTGTGGAGTGCTGCCCACTCCATGTGGAACTGTGGCTTGCCCTAGCAAGGCTGGAGACATATGACCAAGCAAAGAAGGTACTTAACAAGGCAAGAGAAAAGCTTCCTAAGGAACCTGCCATCTGGATTACAGCTGCAAAGCTGGAGGAAGCTAATGGAAACACCCAGTCAGTAATCAAGGTGATTGAGAGAAGTATAAAAACTTTACAGAGAGAAGGATTGGATATTGACAGGGAGGCATGGCTAAAGGAAGCAGAAGCTGCTGAGCGTGCTGGATCTGTATTGACTTGCCAGGCTATTGTTAAGAGCACTATTGGCATTGGTGTTGATGAGGAAGACAGAAAACGCACATGGGTTGCCGATGCTGAGGAATGCAAGAAGCGTGGTTCAATTGAGACAGCCCGTGCCATCTATGCGCATGCACTCAGTGTCTTCGTTTCCAAGAAGAGTATTTGGCTGAAAGCGGCTCAGCTTGAGAAGAGCCATGGAACCAAGGAGTCTCTTTATAATCTCCTCAGAAAGGCTGTTACCTACAATCCACGTGCAGAAGTTTTATGGCTTATGAGTGCAAAGGAGAAATGGCTGGCTGGAGATGTCCCGGCTGCCCGAGCCATTCTTCAGGAAGCTTATGCTTCTCTCCCCAATTCAGAGGAGATCTGGCTAGCTGCCTTCAAGCTTGAGTTTGAGAACAATGAACCAGAGAGAGCAAGAATTCTTTTGTCAAAGGCCAGGGAAAGAGGAGGCACTGAGAGGGTCTGGATGAAATCTGCGATTGTTGAAAGGGAGTTAGGGAATGTAGACGAAGAAAGGAAGCTGTTGGAGGAAGGTCTGAAGTTATTCCCCTCATTCTTCAAGCTGTGGTTAATGCTTGGACAAATGGAAGACCGGCTTGGCCATGGATCCAAGGCAAAGGAGGTTTACGAGAATGCACTGAAGCACTGCCCGAGTTGCATCCCTCTTTGGCTCTCTCTAGCTAATCTAGAGGAGAAGATAAATGGCTTGAGCAAGTCACGTGCTGTCCTCACCATGGCAAGAAAGAAGAACCCAGCTACACCTGAACTCTGGCTTGCAGCAGTTAGGGCTGAATTGAGACATGGGAACAAGAAGGAAGCTGATGCTCTACTAGCCAAGGCATTACAGGAATGCCCGACAAGTGGTATTTTGTGGGCTGCAGCTATAGAGATGGTGCCACGTCCCCAGCGTAAAGCAAAGAGCTCAGATGCTATAAAACGATGTGACCATGATCCCCATGTCATTGCAGCTGTGGCCAAACTTTTCTGGCATGATAGGAAGGTTGATAAAGCTAGAAGTTGGTTGAATAGAGCTGTTACTCTTGCTCCAGACATTGGAGATTTTTGGGCCTTGTACTACAAATTTGAACTGCAACATGGAAATGCTGATACACAAAAGGATGTCCTACAAAGATGTGTTGCAGCAGAACCAAAGCATGGAGAGAGATGGCAAGCAATAACAAAGGCTGTTGAGAACTCACATCTGTCAATTGAGGCCCTTCTGAAGAAAGCTGTGTTGGCTCTTGGCCAGGAAGAAAATCCAAATGCTGCAGATCCCTAGTTTGTCTCACTTTTAACTTTTGATAAGTCTGGTCACAGGTCTAATTCTTCTGCGCATGCTGGCAATGGAATATATAGAGAAAGAAACACAGTTGGGTAGTGAACTGGGATGGACTCGAGCTGCGACCTCGTGATTCTGTGTACCACCGAACTGATTGCTGCACTCCTCCAACCATGAAGCCTTACCTGAAGAAGAATCAGGCATGCGATTACTACAATTTGTATCGGCGATCACCAGTTAAAACCTGTATCGTTTGTATGCCCTAATTGCCAGCAATACTTCTGTACTACCATGAGCATGTTTATTCCTCCAGATGCATACCACAAATTCTTAGATGGGTGTATTTGCTAGCCGCGACTTGGGATGATGTAATTTTTCTTGGGTTCGGTTTATTCTCAGAGCACTGGCGTCTGTATCTACGACTGTAAGATCTGCCTGAATGTCGGCTTAATATATGAGATAATGCCCCATTTTTCAGCACAGGCTGTGAGCATTTCTTC
CDS Sequence
  • >LOC_Os10g35550.1
    ATGGTGTTCGTCCGCGCGCCGGACGGGAGGACCCACCACGTCGACCTCGACCCCTCCACCGCCACGCTCGCCGACCTCACGGCCTCCGCCTCCCGCGTCTGCGGCGGCGTCCCGCCGGAGCAGCTGCGGCTCTACCTCGCCCACCGCCGCCTCCTCCCGGCCGAGCCGTCCCCGCTGCTGTCCTCCCTCCGGGTCTCGGCCTCCTCCTCCCTGCTACTCCACCTCCCCCTGCTCGGAGGGATGACCGGCCCGACGACGACCCCCGCGGCACCCCCGCCCCCGCCGCCGCCGTCGGCGCAGCCGCCCGCCCGCCCCGCGCGCTACGACTTCCTCAACTCCAAGCCGCCCCCGAACTACGTGGCCGGTCTGGGGCGTGGCGCCACCGGGTTCACCACCCGTTCGGATATCGGGCCGGCCCGCGCGGCGCCCGATCTGCCTGACCGGTCCGCCGCCGCCGCCGCCGCCCCCGCCGTCGGGCGCGGCCGTGGGAAGCCACCCGGGGACGACGACGGCGACGACGATGGCGGCGACGAGGAGAAGGGGTACGACGAGAACCAGAAGTTCGACGAGTTCGAGGGCAACGACGCCGGGCTGTTCTCCAACGCCGACTACGACGACGACGACCGCGAGGCGGATGCGGTCTGGGAGAGCATCGACCAGAGGATGGACTCTCGCCGGAAGGATCGGCGGGAGGCGCGGCTGAAGCAGGAGATCGAGAAGTACCGTGCTTCCAACCCTAAGATCACCGAGCAATTCGCTGATTTGAAGCGTAAGTTGGTCGATTTGTCGGCGCAGGAGTGGGAAAGCATACCTGAAATTGGGGACTACTCGCTGCGCAACAAGAAGAAGCGATTTGAGAGCTTCGTTCCCGTGCCGGACACCCTGCTCGAGAAGGCTCGGCAGGAGCAGGAGCATGTCACGGCACTGGATCCCAAGAGCCGTGCAGCTGGTGGCACCGAGACGCCATGGGCGCAGACTCCGGTTACCGATCTGACGGCTGTGGGCGAAGGTCGTGGCACCGTGCTCTCCTTGAAGCTGGACAGGTTGTCGGATTCGGTATCTGGTCTTACTGTTGTTGATCCAAAGGGTTACTTGACGGACCTGAAAAGTATGAAGATTACTAGTGATGCTGAGATTTCTGACATTAAAAAGGCGCGATTGTTGCTTAAGTCAGTGACACAGACAAACCCGAAGCATCCACCAGGATGGATTGCTGCTGCTAGGCTTGAAGAGGTTGCTGGCAAGCTTCAGGTTGCTCGGCAGCTTATCCAGCGTGGCTGTGAGGAGTGCCCCACAAATGAGGATGTTTGGGTCGAGGCATGCCGGCTGGCCAGCCCAGACGAGGCAAAGGCAGTGATTGCTAGGGGCGTGAAGGCAATTCCCAATTCTGTGAAGCTGTGGTTGCAGGCAGCAAAGTTGGAAACTAGTGATTTGAATAAGAGCAGGGTTTTGAGAAAAGGGTTGGAACACATTCCTGATTCAGTCAGACTGTGGAAAGCAGTAGTAGAGCTTGCAAATGAGGAGGATGCAAGACTGTTGCTTCACAGGGCTGTGGAGTGCTGCCCACTCCATGTGGAACTGTGGCTTGCCCTAGCAAGGCTGGAGACATATGACCAAGCAAAGAAGGTACTTAACAAGGCAAGAGAAAAGCTTCCTAAGGAACCTGCCATCTGGATTACAGCTGCAAAGCTGGAGGAAGCTAATGGAAACACCCAGTCAGTAATCAAGGTGATTGAGAGAAGTATAAAAACTTTACAGAGAGAAGGATTGGATATTGACAGGGAGGCATGGCTAAAGGAAGCAGAAGCTGCTGAGCGTGCTGGATCTGTATTGACTTGCCAGGCTATTGTTAAGAGCACTATTGGCATTGGTGTTGATGAGGAAGACAGAAAACGCACATGGGTTGCCGATGCTGAGGAATGCAAGAAGCGTGGTTCAATTGAGACAGCCCGTGCCATCTATGCGCATGCACTCAGTGTCTTCGTTTCCAAGAAGAGTATTTGGCTGAAAGCGGCTCAGCTTGAGAAGAGCCATGGAACCAAGGAGTCTCTTTATAATCTCCTCAGAAAGGCTGTTACCTACAATCCACGTGCAGAAGTTTTATGGCTTATGAGTGCAAAGGAGAAATGGCTGGCTGGAGATGTCCCGGCTGCCCGAGCCATTCTTCAGGAAGCTTATGCTTCTCTCCCCAATTCAGAGGAGATCTGGCTAGCTGCCTTCAAGCTTGAGTTTGAGAACAATGAACCAGAGAGAGCAAGAATTCTTTTGTCAAAGGCCAGGGAAAGAGGAGGCACTGAGAGGGTCTGGATGAAATCTGCGATTGTTGAAAGGGAGTTAGGGAATGTAGACGAAGAAAGGAAGCTGTTGGAGGAAGGTCTGAAGTTATTCCCCTCATTCTTCAAGCTGTGGTTAATGCTTGGACAAATGGAAGACCGGCTTGGCCATGGATCCAAGGCAAAGGAGGTTTACGAGAATGCACTGAAGCACTGCCCGAGTTGCATCCCTCTTTGGCTCTCTCTAGCTAATCTAGAGGAGAAGATAAATGGCTTGAGCAAGTCACGTGCTGTCCTCACCATGGCAAGAAAGAAGAACCCAGCTACACCTGAACTCTGGCTTGCAGCAGTTAGGGCTGAATTGAGACATGGGAACAAGAAGGAAGCTGATGCTCTACTAGCCAAGGCATTACAGGAATGCCCGACAAGTGGTATTTTGTGGGCTGCAGCTATAGAGATGGTGCCACGTCCCCAGCGTAAAGCAAAGAGCTCAGATGCTATAAAACGATGTGACCATGATCCCCATGTCATTGCAGCTGTGGCCAAACTTTTCTGGCATGATAGGAAGGTTGATAAAGCTAGAAGTTGGTTGAATAGAGCTGTTACTCTTGCTCCAGACATTGGAGATTTTTGGGCCTTGTACTACAAATTTGAACTGCAACATGGAAATGCTGATACACAAAAGGATGTCCTACAAAGATGTGTTGCAGCAGAACCAAAGCATGGAGAGAGATGGCAAGCAATAACAAAGGCTGTTGAGAACTCACATCTGTCAATTGAGGCCCTTCTGAAGAAAGCTGTGTTGGCTCTTGGCCAGGAAGAAAATCCAAATGCTGCAGATCCCTAG
Protein Sequence
  • >LOC_Os10g35550.1
    MVFVRAPDGRTHHVDLDPSTATLADLTASASRVCGGVPPEQLRLYLAHRRLLPAEPSPLLSSLRVSASSSLLLHLPLLGGMTGPTTTPAAPPPPPPPSAQPPARPARYDFLNSKPPPNYVAGLGRGATGFTTRSDIGPARAAPDLPDRSAAAAAAPAVGRGRGKPPGDDDGDDDGGDEEKGYDENQKFDEFEGNDAGLFSNADYDDDDREADAVWESIDQRMDSRRKDRREARLKQEIEKYRASNPKITEQFADLKRKLVDLSAQEWESIPEIGDYSLRNKKKRFESFVPVPDTLLEKARQEQEHVTALDPKSRAAGGTETPWAQTPVTDLTAVGEGRGTVLSLKLDRLSDSVSGLTVVDPKGYLTDLKSMKITSDAEISDIKKARLLLKSVTQTNPKHPPGWIAAARLEEVAGKLQVARQLIQRGCEECPTNEDVWVEACRLASPDEAKAVIARGVKAIPNSVKLWLQAAKLETSDLNKSRVLRKGLEHIPDSVRLWKAVVELANEEDARLLLHRAVECCPLHVELWLALARLETYDQAKKVLNKAREKLPKEPAIWITAAKLEEANGNTQSVIKVIERSIKTLQREGLDIDREAWLKEAEAAERAGSVLTCQAIVKSTIGIGVDEEDRKRTWVADAEECKKRGSIETARAIYAHALSVFVSKKSIWLKAAQLEKSHGTKESLYNLLRKAVTYNPRAEVLWLMSAKEKWLAGDVPAARAILQEAYASLPNSEEIWLAAFKLEFENNEPERARILLSKARERGGTERVWMKSAIVERELGNVDEERKLLEEGLKLFPSFFKLWLMLGQMEDRLGHGSKAKEVYENALKHCPSCIPLWLSLANLEEKINGLSKSRAVLTMARKKNPATPELWLAAVRAELRHGNKKEADALLAKALQECPTSGILWAAAIEMVPRPQRKAKSSDAIKRCDHDPHVIAAVAKLFWHDRKVDKARSWLNRAVTLAPDIGDFWALYYKFELQHGNADTQKDVLQRCVAAEPKHGERWQAITKAVENSHLSIEALLKKAVLALGQEENPNAADP*