Information report for OsARF22
Gene Details
|
|
Functional Descriptions
- Meanwhile, the transcriptional repressors OsARF18 and OsARF22 were upregulated in the callus of hda710.
- The ChIP-qPCR analysis demonstrated that the callus of hda710 exhibited enhanced histone H3 acetylation levels at the chromatin regions of OsARF18 and OsARF22.
Functional Keywords
Literature and News
Gene Resources
- UniProt: Q9AV47
- EMBL: AC024594, AK318617, AP008216
- AlphaFoldDB: Q9AV47
- EnsemblPlants: Os10t0479900-01
- Gramene: Os10t0479900-01
- KEGG: dosa:Os10g0479900
- Orthologous matrix: ACGGMEC
- InterPro: IPR003340, IPR010525, IPR015300
- PANTHER: PTHR31384, PTHR31384:SF165
- SUPFAM: SSF101936
- PROSITE: PS50863, PS51745
- Gene3D: 2.30.30.1040, 2.40.330.10, 3.10.20.90
- OrthoDB: Q9AV47
- SWISS-MODEL: Q9AV47
- Conserved Domain Database: cd10017
- eggNOG: ENOG502QQ5I
Homologs
- Brachypodium distachyon: Bradi3g28950.1.p
- Hordeum vulgare: MLOC_64795.3, MLOC_64795.2, MLOC_64795.1
- Panicum virgatum: Pavir.9KG184300.2.p, Pavir.9KG184300.1.p
- Setaria italica: Seita.9G219800.1.p
- Setaria viridis: Sevir.9G219100.1.p
- Zea mays: GRMZM2G153233_P01
Sequences
cDNA Sequence
- >LOC_Os10g33940.1
ATAATTCCAATCCACTGTGCCCTAGCTCGCCCACCTCTTCCTCCCCCGCGAGAGAGAGAGGAGAGAGAATTCGATCTCTTCTTTCTCCCTTTTTTTCTGTTCGGTTTTTGCGGTGTGGGAGGGGGCGTGGATTTGATGTAGATTATTAGGGACTACCACCACCACCGTTTCTGTTGCAGTTGCGGAATTGGAGGATTGTGTGTTTGGTTTCTTGATCTGAGGAGGAAGAAGACATGAGAGGTTTGGTGGGTGAGCGGTGATCGCATTTGGGGGTTGGAGATGAAGGAGGTGGGGGAGGTGGAGGAGGTGAGGTGCTTGGACCCGCAGCTATGGCACGCGTGCGCGGGCGGGATGGTGCAGATGCCGGCGCCGCGTTCCCGGGTGTACTACTTCGCGCAGGGCCACGCCGAGCACGCCGACGGCGGAGGCGGGGCGGCGGCGGCGGCCGCGGAGCTGGGGCCGCGCGCGCTCCCGCCGCTCGTGCTCTGCCGCGTCGAAGGGGTCCAGTTCCTGGCCGATCGGGACTCCGACGAGGTGTACGCCAAGATCCGCCTCGCGCCGGTCGCCCCCGGGGAGGCCGAGTTCCGGGAGCCCGACGAGCTCTGCCCGCTCGGCGCCGCCGGCGACGCGGCGGAGCCGTCGCCGGAGAAGCCGACCTCGTTCGCCAAGACGCTCACGCAGTCCGACGCCAACAACGGCGGCGGCTTCTCGGTGCCCCGCTACTGCGCCGAGACCATCTTCCCCAAGCTGGACTACAGGGCCGACCCGCCGGTGCAGACGGTGCTCGCCAAGGACGTCCACGGCGTGGTCTGGAAGTTCCGCCACATCTACCGCGGCACGCCGCGCCGGCATTTGCTCACCACCGGGTGGAGCACGTTCGTGAACCAGAAGAAGCTCGTCGCGGGGGACTCGATCGTGTTCCTGCGCACCAGGCACGGGGAGCTCTGCGTCGGGATACGGCGGGCGAAGCGGATGGCGTGCGGGGGGATGGAGTGCATGTCGGGGTGGAACGCGCCGGGCTATGGCGGCGGCGGCTTCTCGGCGTTCTTAAAGGAGGAGGAGAGTAAGCTGATGAAGGGCCATGGTGGTGGTGGGTACATGAAGGGCAAGGGGAAGGTGAGGATGGCCGATGTCGTGGAGGCCGCTAGCCTCGCGTCGAGCGGGCAGCCGTTCGAGGTGGCGTACTACCCGAGGGCTAGCACCCCGGATTTTGTCGTGAAGGCTGCGTCGGTGCAGGCCGCAATGAGGATCCAGTGGTGCTCCGGGATGAGGTTCAAGATGGCTTTTGAGACAGAGGATTCATCAAGGATTAGCTGGTTTATGGGGACAATATCTTCTGTTCAGGTTGCTGATCCCAACAGATGGCCGAATTCGCCGTGGAGACTTCTTCAGGTGACATGGGATGAACCGGACCTGTTGCAGAATGTGAAATGTGTCAGCCCATGGCTTGTGGAGCTTGTGTCAAGTATTCCACCAATCCATTTAGGACCATTTTCGTCACCTCGAAAGAAGTTGCGGGTTCCCCCACATCCTGACTTCCCATTTGAGGGTCATCTTCTGAACCCAATTTTCCATGGGAACCCACTTGGTCCTAGCAACAGCCCACTATGCTGTTACCCGGACACCGCTCCTGCAGGCATACAGGGAGCCAGGCATGCTCAATTTGGTTTACCACTAACAGACCACCAGCTTAACAAGCTGCACCTTGGTCTGTTACATAGCGGCAGTTTTAACAGACTTGATGCTATTACTCCACCTTCCCGGATATCAAAGGGCTTTGTGGTCAGTAGTGCACCAGCCCATGACAATATCTCTTGTTTGTTGTCAATCAGTACACCACAGGTCGCAGAGAAATCTGATGACAGAAAGACGACACCCCATATAATGCTGTTTGGAAAGGCTATATTTACTGAGCAGCAGATAACTTCAAGCGGATCAACAGAGACACTCTCCCCTGGAGTTACTGGAAATAGCTCACCTAATGGCAATGCGCACAAGACAGGAAATGCATCTGATGGTTCTGGTTCATCAATTTGCATTGGTTTCTCATCTCAAGGTCACGAGGCTTCTGACCTTGGTTTAGAAGCTGGTCACTGCAAGGTATTTATGGAATCGGAGGACGTTGGTCGCACCATTGATTTGTCTGTCTTTGGGTCATACGAAGAACTGTATGGTCGGCTGGCTGACATGTTCGGAATCGAGAAAGAAGAAATCATAAACCATCTTCATTTCCGTGACGCAGCTGGTGTAGTCAAGCATCCGGGTGAGGTACCATTCAGTGACTTCATGAAAGCGGCACGGAGGCTTACAATAATAGCCGGCGACAGGGAGAGAATTGAGAGACCTCTCATCGAATGCTTAGTTGAGCAGGCGTGATAGTTCAATAAACTCCCGTTTGAATTTAATTCTGAAATATGAATCGTAGCGTGAAAAGACTTCCTTTGTTACATGTACTTGCGTTGGGCTGTTAACTAAGCAGACCTGCTTTGTATTGTCAGTGTTGTGGATTGCTCAAGTTAAGGTGTGTGTGTTTTTATCTTGCCTCGGTTAGCTGTCAGTTTCTTTGTTGCAATCAGTGGTCATGTTCTTCTGTTCAAGTTCGTAAACCAAACACTTGGATGAATCTTAGTCAAAATAAAAGTTCCTTGGGAAATCCTACAATTTCACAGCTCA
CDS Sequence
- >LOC_Os10g33940.1
ATGAAGGAGGTGGGGGAGGTGGAGGAGGTGAGGTGCTTGGACCCGCAGCTATGGCACGCGTGCGCGGGCGGGATGGTGCAGATGCCGGCGCCGCGTTCCCGGGTGTACTACTTCGCGCAGGGCCACGCCGAGCACGCCGACGGCGGAGGCGGGGCGGCGGCGGCGGCCGCGGAGCTGGGGCCGCGCGCGCTCCCGCCGCTCGTGCTCTGCCGCGTCGAAGGGGTCCAGTTCCTGGCCGATCGGGACTCCGACGAGGTGTACGCCAAGATCCGCCTCGCGCCGGTCGCCCCCGGGGAGGCCGAGTTCCGGGAGCCCGACGAGCTCTGCCCGCTCGGCGCCGCCGGCGACGCGGCGGAGCCGTCGCCGGAGAAGCCGACCTCGTTCGCCAAGACGCTCACGCAGTCCGACGCCAACAACGGCGGCGGCTTCTCGGTGCCCCGCTACTGCGCCGAGACCATCTTCCCCAAGCTGGACTACAGGGCCGACCCGCCGGTGCAGACGGTGCTCGCCAAGGACGTCCACGGCGTGGTCTGGAAGTTCCGCCACATCTACCGCGGCACGCCGCGCCGGCATTTGCTCACCACCGGGTGGAGCACGTTCGTGAACCAGAAGAAGCTCGTCGCGGGGGACTCGATCGTGTTCCTGCGCACCAGGCACGGGGAGCTCTGCGTCGGGATACGGCGGGCGAAGCGGATGGCGTGCGGGGGGATGGAGTGCATGTCGGGGTGGAACGCGCCGGGCTATGGCGGCGGCGGCTTCTCGGCGTTCTTAAAGGAGGAGGAGAGTAAGCTGATGAAGGGCCATGGTGGTGGTGGGTACATGAAGGGCAAGGGGAAGGTGAGGATGGCCGATGTCGTGGAGGCCGCTAGCCTCGCGTCGAGCGGGCAGCCGTTCGAGGTGGCGTACTACCCGAGGGCTAGCACCCCGGATTTTGTCGTGAAGGCTGCGTCGGTGCAGGCCGCAATGAGGATCCAGTGGTGCTCCGGGATGAGGTTCAAGATGGCTTTTGAGACAGAGGATTCATCAAGGATTAGCTGGTTTATGGGGACAATATCTTCTGTTCAGGTTGCTGATCCCAACAGATGGCCGAATTCGCCGTGGAGACTTCTTCAGGTGACATGGGATGAACCGGACCTGTTGCAGAATGTGAAATGTGTCAGCCCATGGCTTGTGGAGCTTGTGTCAAGTATTCCACCAATCCATTTAGGACCATTTTCGTCACCTCGAAAGAAGTTGCGGGTTCCCCCACATCCTGACTTCCCATTTGAGGGTCATCTTCTGAACCCAATTTTCCATGGGAACCCACTTGGTCCTAGCAACAGCCCACTATGCTGTTACCCGGACACCGCTCCTGCAGGCATACAGGGAGCCAGGCATGCTCAATTTGGTTTACCACTAACAGACCACCAGCTTAACAAGCTGCACCTTGGTCTGTTACATAGCGGCAGTTTTAACAGACTTGATGCTATTACTCCACCTTCCCGGATATCAAAGGGCTTTGTGGTCAGTAGTGCACCAGCCCATGACAATATCTCTTGTTTGTTGTCAATCAGTACACCACAGGTCGCAGAGAAATCTGATGACAGAAAGACGACACCCCATATAATGCTGTTTGGAAAGGCTATATTTACTGAGCAGCAGATAACTTCAAGCGGATCAACAGAGACACTCTCCCCTGGAGTTACTGGAAATAGCTCACCTAATGGCAATGCGCACAAGACAGGAAATGCATCTGATGGTTCTGGTTCATCAATTTGCATTGGTTTCTCATCTCAAGGTCACGAGGCTTCTGACCTTGGTTTAGAAGCTGGTCACTGCAAGGTATTTATGGAATCGGAGGACGTTGGTCGCACCATTGATTTGTCTGTCTTTGGGTCATACGAAGAACTGTATGGTCGGCTGGCTGACATGTTCGGAATCGAGAAAGAAGAAATCATAAACCATCTTCATTTCCGTGACGCAGCTGGTGTAGTCAAGCATCCGGGTGAGGTACCATTCAGTGACTTCATGAAAGCGGCACGGAGGCTTACAATAATAGCCGGCGACAGGGAGAGAATTGAGAGACCTCTCATCGAATGCTTAGTTGAGCAGGCGTGA
Protein Sequence
- >LOC_Os10g33940.1
MKEVGEVEEVRCLDPQLWHACAGGMVQMPAPRSRVYYFAQGHAEHADGGGGAAAAAAELGPRALPPLVLCRVEGVQFLADRDSDEVYAKIRLAPVAPGEAEFREPDELCPLGAAGDAAEPSPEKPTSFAKTLTQSDANNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGVVWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRTRHGELCVGIRRAKRMACGGMECMSGWNAPGYGGGGFSAFLKEEESKLMKGHGGGGYMKGKGKVRMADVVEAASLASSGQPFEVAYYPRASTPDFVVKAASVQAAMRIQWCSGMRFKMAFETEDSSRISWFMGTISSVQVADPNRWPNSPWRLLQVTWDEPDLLQNVKCVSPWLVELVSSIPPIHLGPFSSPRKKLRVPPHPDFPFEGHLLNPIFHGNPLGPSNSPLCCYPDTAPAGIQGARHAQFGLPLTDHQLNKLHLGLLHSGSFNRLDAITPPSRISKGFVVSSAPAHDNISCLLSISTPQVAEKSDDRKTTPHIMLFGKAIFTEQQITSSGSTETLSPGVTGNSSPNGNAHKTGNASDGSGSSICIGFSSQGHEASDLGLEAGHCKVFMESEDVGRTIDLSVFGSYEELYGRLADMFGIEKEEIINHLHFRDAAGVVKHPGEVPFSDFMKAARRLTIIAGDRERIERPLIECLVEQA*