Gene Details:
- MSU gene ID: LOC_Os10g33370
- RAPdb gene ID: Os10g0472900
- Gene Symbol: SD38
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- Significant changes were observed in the expression of genes involved in ethylene synthesis, which resulted in reduced content of the ethylene precursor 1-aminocyclopropane-1-carboxylic acid (ACC) in the SD38 mutant.
- Exogenously supplied VLCFA (C24:0) increased the expression levels of OsACS3, OsACS4, and OsACO7 and the plant height of SD38 mutant seedlings, similar to the effect of exogenous application of ACC and ethephon.
Function-related keywords:
Literature:
- A very-long-chain fatty acid synthesis gene, SD38, influences plant height by activating ethylene biosynthesis in rice . DOI: 10.1111/tpj.15998 ; PMID: 36196616
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os10g33370.1
AAGTTGTGAATACTATGTTAATATATGCGCACAAACTATAAGGTAGCAGCACTGAATTGCTATACTGCATGCTGAAGAACATGGCGAGCACCTGACTAAACACTGCAAGCGAGAGCAGCACAGAATTAACTTAGCTAGCTAGCCAAGCTCGATCAGTCAAGCTGGAGGACGAATTGTGGGTGCCATCACCCAAGTTCACCAAGCAGTTTCTCAATTCTTCCAGATACTAAAGGGGCAGCAACAGCGATAATCGAGTGGTTACCATTGTATTTTCAAACCCTGCAGTGCATTGAACAAGTTTGCACCCCCAAGTGCTTTTTCCTCGACTTAAATTTGAGTATATATATATATCGCAGTGGATCATGGAAATCATGTTTTGCTTGATTTTGTATGTTTGGTACCTAAAATAGTCCTCTGCCTTTCCCATTCGACACTAAGTTTGAAACATATATATTGTTGCTCGTAGGGTATATATATATAGATGAAATTAATGTAGTGGGACACAAAAAAAAAGGTATTTTGTGTGACCTAATAAAACATTATTATCAAAATTAATATATTTTGTATATGTCCACAAATGAAGGAAGACTTAAGTCCCCGTTCTTTTATCATTACAGACACCAAATTATGCGAGGCACACTTTCCAAACACTCTCGATTTTTGAGAAAACTTTCTTCATCAGCATTTCTTGAAAAAAAATACCTTTTCTAAATCAACTTAAGTTATACGGTGGTTCTCTCAAACTCAGTTTCACCTATTACCATTTTTAAACATGCTCTTAGGTTAAGTTTGGTAGACAACAGCCCTGACCTGCATACCTTGTTGGTCTCTTCATCCTAAAAATCTAAAGATCAATCATAAATATTCATATTTTTTTAAAAAAAAAAGGTAAGGAGGAGTACTTAAGGGTAGTGGTGTAGTTACATATATATATATATATATATATGACTATTCACCAATATTTAAATCCGTGTCTAAATTTTGCGCGCATGCACGTACATTTTCTATAGACTCTAATAACAATCTCCGTAAGGAAAGAAACATTGTGTTTGGTGTACACGTCGTCTTTCATTAAAAAATAATTTTGAAGACAAAAGGTTGAAAATAAACCTGCACTACTAATTTTAATTTAAATGAAAAAAAAGAATCTTCTCATGAGCCATGCATGATCCCTCTTTATTTTTTCAATAAAATAAAATAAAGATCCATGAGCCACTCCACCTTAGCTCCTATAAAGACTCCCCCCCTCTCCCCTCCCCTTTCCTCTAAACCCCTTCCAATAATCCCTCACCAACCCATACCCCCACACTCCCTCTCACACTCCACTCTAGCTAGCTAAGCTACCTTCTTACTCCATTTGAGCAAACCAAAGCTCATCTAGAGAGAGAGAGAGAGATCTAGAGAGAGAAACCAGCAACCACTCTTCCTCCATCTCCATGAGCAAGAGACCAGATCGTTCGTTCTAGATTGTTCTAGCTAGATAGCTTCATCGTCAACCTTGGCAACGCCAAGAAAATTAACCAGCAAGAACACAAGAAGCGGCGGCGGCGGCGATGGAGGTGGCGACGATGCTGACGCTGACGCTGCTGGCGTACTCGGCGGCGATGCTGGCGCGGCTGCTGGTGGCGCGGTCCCGGCGGCGGCGGTGCTACCTCCTCGACTACGTGTGCTACAAGGCGACCGACGACCGGAAGCTCCCCACCGACCTGTGCGGCGAGATCATCCAGCGGAACAAGCTGCTGGGGCTGGAGGAGTACAAGTTCCTCCTCAAGGTCATCGTCAACTCCGGCATCGGCGAGGAGACCTACGGGCCCCGGAACATCATCGGCGGCGGCGACGCCCGCCCCGACCGCCTCGCCGAGGGGATGGAGGAGATGGACGAGACGTTCCACGCCGTGCTCGACGAGCTGTTCGCGCGCTCGTCCGCGGCGGGCGGCGGCGGCGTCCGCCCCGCCGACGTCGACCTCCTCGTCGTCAACGTGTCCATGTTCTCGCCGGCGCCGTCGCTCTCCGCCCGCGTCGTGCGCCGCTACAACCTCCGGGAGGACGTGAAGGTGTACAACCTCACCGGCATGGGATGCAGCGCCACCCTCATCGCCCTCGACCTCGTCAACAACTTCCTCAGGACGCACGCGAACAAGGTGGCGCTGGTGATGACGTCGGAGTCGATCGCCCCAAACTGGTACGCCGGGAACAAGCGCAGCTTCATGCTGGGCAACTGCCTCTTCCGCTCCGGCGGCTGCGCCTACTTCCTCACCAACGACCCCCGCCACCGCCGCCACGCCAAGCTCCGCCTCCGCCACCTCGTCCGCACCCACACCGGCGCCTCCGACGACGCCTACTCCTGCGCCCTCCAGATGGAGGACGACGCCGGCCGCCCGGGATTCCACCTCGGCAAGGACCTCCCCCGCGCCGCCGTCCACGCCTTCGTCAAGAACCTCCGCCTCCTCGCCCCCCGCGTCCTCCCCCTCCCCGAGCTCCTCCGCCTCGCCTTCGCCACCTTCCTCTCCTCCGGCCGCCGCAGCGGCGGCAAGAAGACCTCGCCGTCGCAGCAGCCGCTCACCATCCGCATGAAGGCCGGCGTCGACCACTTCTGCGTGCACACCGGCGGCGCCGCGGTGATCGACGGCGTCGGCAAGGGGCTCACCCTGACGGAGCACGACCTCGAGCCGTCGCGGATGACGCTGCACAGGTTCGGGAACACGTCGGCGAGCAGCGTCTGGTACGTGCTCGGCTACATGGAGGCCAAGCGCCGCCTCCGCCCCGGCGACCGCGTCCTCATGCTCACCTTCGGCGCCGGCTTCAAGTGCAACAGCTGCGTCTGGACCGTCGAGAAGCCCGTCTCCGACGCCGGCGTCTGGAAGGACTGCATCGACCACTACCCTCCCAAGGAGCTCGCCAACCCCTTCATGGAGAAGTACGGCTTCGTCAAGGACATGATGAACTTGTGATCGATCCATCAAATTCCCCAATTAATTCCTCGATCGATCTCTCAAGAACCAATATAATCAATCGATATTGCATGTGCTTGCTTGCGTGCATGGATTAATTAAGCGATCGGTTAGTTAATTAATTTTATCGCCATTTGCTGCAGCTCTGTTGATGATTAGGATGAACATTATATTTACAGGGAGGGGGAAGAAGAAGTAAGAACAATCAATGAGTTGAACAAAAAAAAAACTAAGGATTCAATTCATAGGTACATATAGCAGCTTGTGATTCCATAATTTTCTTTTCAGCATGGTGGTAGTATATGGATTTTATTTATTTATCTTATTTTTTTTGTTGTTGTTTGTAACTCTCTGTATGTTGCTAGCTACGAGTGTCGTCCTAGCTGGTGGCAGGTGTTGTGTCTTTCATTAATTGTTCATGGTGATGGACTATTTCTATTCAAGGATCAAATTAAATTATTTTTTTTTGAAAGGAGGATTATTTATCAGTTCATGGTCATGTGCAAGTCTCATGCTGCAATAAATATCATATACCCTGTAAAGATACAAATAGTATACTATGTACTAGCTACTATAAGGAGTATATGTTTTATTCATATCTTTTGAGAACC
CDS Sequence
- >LOC_Os10g33370.1
ATGGAGGTGGCGACGATGCTGACGCTGACGCTGCTGGCGTACTCGGCGGCGATGCTGGCGCGGCTGCTGGTGGCGCGGTCCCGGCGGCGGCGGTGCTACCTCCTCGACTACGTGTGCTACAAGGCGACCGACGACCGGAAGCTCCCCACCGACCTGTGCGGCGAGATCATCCAGCGGAACAAGCTGCTGGGGCTGGAGGAGTACAAGTTCCTCCTCAAGGTCATCGTCAACTCCGGCATCGGCGAGGAGACCTACGGGCCCCGGAACATCATCGGCGGCGGCGACGCCCGCCCCGACCGCCTCGCCGAGGGGATGGAGGAGATGGACGAGACGTTCCACGCCGTGCTCGACGAGCTGTTCGCGCGCTCGTCCGCGGCGGGCGGCGGCGGCGTCCGCCCCGCCGACGTCGACCTCCTCGTCGTCAACGTGTCCATGTTCTCGCCGGCGCCGTCGCTCTCCGCCCGCGTCGTGCGCCGCTACAACCTCCGGGAGGACGTGAAGGTGTACAACCTCACCGGCATGGGATGCAGCGCCACCCTCATCGCCCTCGACCTCGTCAACAACTTCCTCAGGACGCACGCGAACAAGGTGGCGCTGGTGATGACGTCGGAGTCGATCGCCCCAAACTGGTACGCCGGGAACAAGCGCAGCTTCATGCTGGGCAACTGCCTCTTCCGCTCCGGCGGCTGCGCCTACTTCCTCACCAACGACCCCCGCCACCGCCGCCACGCCAAGCTCCGCCTCCGCCACCTCGTCCGCACCCACACCGGCGCCTCCGACGACGCCTACTCCTGCGCCCTCCAGATGGAGGACGACGCCGGCCGCCCGGGATTCCACCTCGGCAAGGACCTCCCCCGCGCCGCCGTCCACGCCTTCGTCAAGAACCTCCGCCTCCTCGCCCCCCGCGTCCTCCCCCTCCCCGAGCTCCTCCGCCTCGCCTTCGCCACCTTCCTCTCCTCCGGCCGCCGCAGCGGCGGCAAGAAGACCTCGCCGTCGCAGCAGCCGCTCACCATCCGCATGAAGGCCGGCGTCGACCACTTCTGCGTGCACACCGGCGGCGCCGCGGTGATCGACGGCGTCGGCAAGGGGCTCACCCTGACGGAGCACGACCTCGAGCCGTCGCGGATGACGCTGCACAGGTTCGGGAACACGTCGGCGAGCAGCGTCTGGTACGTGCTCGGCTACATGGAGGCCAAGCGCCGCCTCCGCCCCGGCGACCGCGTCCTCATGCTCACCTTCGGCGCCGGCTTCAAGTGCAACAGCTGCGTCTGGACCGTCGAGAAGCCCGTCTCCGACGCCGGCGTCTGGAAGGACTGCATCGACCACTACCCTCCCAAGGAGCTCGCCAACCCCTTCATGGAGAAGTACGGCTTCGTCAAGGACATGATGAACTTGTGA
Protein Sequence
- >LOC_Os10g33370.1
MEVATMLTLTLLAYSAAMLARLLVARSRRRRCYLLDYVCYKATDDRKLPTDLCGEIIQRNKLLGLEEYKFLLKVIVNSGIGEETYGPRNIIGGGDARPDRLAEGMEEMDETFHAVLDELFARSSAAGGGGVRPADVDLLVVNVSMFSPAPSLSARVVRRYNLREDVKVYNLTGMGCSATLIALDLVNNFLRTHANKVALVMTSESIAPNWYAGNKRSFMLGNCLFRSGGCAYFLTNDPRHRRHAKLRLRHLVRTHTGASDDAYSCALQMEDDAGRPGFHLGKDLPRAAVHAFVKNLRLLAPRVLPLPELLRLAFATFLSSGRRSGGKKTSPSQQPLTIRMKAGVDHFCVHTGGAAVIDGVGKGLTLTEHDLEPSRMTLHRFGNTSASSVWYVLGYMEAKRRLRPGDRVLMLTFGAGFKCNSCVWTVEKPVSDAGVWKDCIDHYPPKELANPFMEKYGFVKDMMNL*