Gene Details:
- MSU gene ID: LOC_Os10g30850
- RAPdb gene ID: Os10g0445400
- Gene Symbol: OsHCI1
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- This study found that one rice gene encoding the RING finger protein was specifically induced by heat and cold stress treatments but not by salinity or dehydration and named it OsHCI1 (Oryza sativa heat and cold induced 1).
- OsHCI1 physically interacted with nuclear substrate proteins including a basic helix-loop-helix transcription factor.
- In contrast, OsHCI1 may have accumulated in the nucleus under high temperatures.
Function-related keywords:
Literature:
- The rice RING finger E3 ligase, OsHCI1, drives nuclear export of multiple substrate proteins and its heterogeneous overexpression enhances acquired thermotolerance . DOI: 10.1093/jxb/ert143 ; PMID: 23698632
Related News:
Gene Resources:
- NCBI ID: AK067013
- UniProt accessions:
Sequences:
cDNA Sequence
- >LOC_Os10g30850.2
GAGAGGAGTGGAGTGGGGCTCGGATTAGAGTTGGACTCGGCAACGCGACGAGCACCAAAAGCGAGGGAAGAAAACCAATCCGAATCCGGAGAGAGAAGCGCAGGAGGCAAAATCCACTCCAATTCAACCCAATCACCCGCGGCGAGCCGAGCGGGCGGCGGAGCACGACGACGACGAGGTTTAGGTAGGGGTTCTTGGCTTGTCGGCGTCGGCGGCGGCGGCGGCGGAGGAGGAGGAGGAGTCAGCGATGCGGAGGAGGTTCCAGGACTCCGTCAAGGCCCTCGAGGCCGACATCGAGCACGCCAATGAGCTGGCGTCGGAGTTCTTGCGGGATTACGACGGGGCGGTGATCCAGATGCGGATGGCGTACAGCGCCGTCGCGCACTTCCTCGTGCAGTGGATCGACTGCAAGCTCGCCGGCGCGCTCGGCCTCCTCAAGATCATGATCTACAAGGTGTACGCCGATGGCACCACGGCTCTGCCGGAGTGGGAGAGGGAGGCCAGCATCAGGCAATTCTACGGTGTCATCTTCCCGTCGCTGCTCCAGCTGCCGAGTGGGATAACTGAATTGGACGACAGGAAGCAGAGGAGGCTGTGCCTTCAGAAGTTCAGGAAGGTGGAGGAGAGGGTCTCGGAGGTGGATTTGGAGAGGGAGCTCGAGTGCGGCATCTGCCTCGAGGTGAATGCCAAGATTGTGCTGCCCGATTGCGCGCACTCGCTGTGCATGAGATGCTTCGAGGATTGGAACACCAAATCAAAGTCGTGCCCCTTCTGCCGCGCCTGCCTCAAGAAGGTGAATCCGAGCAGCCTGTGGTTGTACACCGACGACCGCGATGTTGTGGATATGGATACGTTGACTAGGGAGAACATTAGGCGCCTGTTCATGTTCATAAGTAAGCTTCCACTTGTAGTGCTCCATGTGGTTGACCTTGACATTTACGAGTACCGTATCAAGTGAAACTGTACTCTTTTGTTCATACCGGTGGGTCTCTGTACATATCAAATTCATCGGTGCTGATCTGTGATAGCTCAACCTGAGGCTGCAAATTAGCAGAGTTGTTTGTAGCTCAACGAGTTGATAATATTTTTGTGAAAAGAAGATGCTGAAGTGTACTCCAAAATTGCATATGC - >LOC_Os10g30850.1
GAGAGGAGTGGAGTGGGGCTCGGATTAGAGTTGGACTCGGCAACGCGACGAGCACCAAAAGCGAGGGAAGAAAACCAATCCGAATCCGGAGAGAGAAGCGCAGGAGGCAAAATCCACTCCAATTCAACCCAATCACCCGCGGCGAGCCGAGCGGGCGGCGGAGCACGACGACGACGAGGTTTAGGTAGGGGTTCTTGGCTTGTCGGCGTCGGCGGCGGCGGCGGCGGAGGAGGAGGAGGAGTCAGCGATGCGGAGGAGGTTCCAGGACTCCGTCAAGGCCCTCGAGGCCGACATCGAGCACGCCAATGAGCTGGCGTCGGAGTTCTTGCGGGATTACGACGGGGCGGTGATCCAGATGCGGATGGCGTACAGCGCCGTCGCGCACTTCCTCGTGCAGTGGATCGACTGCAAGCTCGCCGGCGCGCTCGGCCTCCTCAAGATCATGATCTACAAGGTGTACGCCGATGGCACCACGGCTCTGCCGGAGTGGGAGAGGGAGGCCAGCATCAGGCAATTCTACGGTGTCATCTTCCCGTCGCTGCTCCAGCTGCCGAGTGGGATAACTGAATTGGACGACAGGAAGCAGAGGAGGCTGTGCCTTCAGAAGTTCAGGAAGGTGGAGGAGAGGGTCTCGGAGGTGGATTTGGAGAGGGAGCTCGAGTGCGGCATCTGCCTCGAGGTGAATGCCAAGATTGTGCTGCCCGATTGCGCGCACTCGCTGTGCATGAGATGCTTCGAGGATTGGAACACCAAATCAAAGTCGTGCCCCTTCTGCCGCGCCTGCCTCAAGAAGGTGAATCCGAGCAGCCTGTGGTTGTACACCGACGACCGCGATGTTGTGGATATGGATACGTTGACTAGGGAGAACATTAGGCGCCTGTTCATGTTCATAAGTAAGCTTCCACTTGTAGTGCTCCATGTGGTTGACCTTGACATTTACGAGTACCGTATCAAGTGAAACTGTACTCTTTTGTTCATACCGGTGGGTCTCTGTACATATCAAATTCATCGGTGCTGATCTGTGATAGCTCAACCTGAGGCTGCAAATTAGCAGAGTTGTTTGTAGCTCAACGAGTTGATAATATTTTTGTGAAAAGAAGATGCTGAAGTGTACTCCAAAATTGCATATGC
CDS Sequence
- >LOC_Os10g30850.2
ATGCGGAGGAGGTTCCAGGACTCCGTCAAGGCCCTCGAGGCCGACATCGAGCACGCCAATGAGCTGGCGTCGGAGTTCTTGCGGGATTACGACGGGGCGGTGATCCAGATGCGGATGGCGTACAGCGCCGTCGCGCACTTCCTCGTGCAGTGGATCGACTGCAAGCTCGCCGGCGCGCTCGGCCTCCTCAAGATCATGATCTACAAGGTGTACGCCGATGGCACCACGGCTCTGCCGGAGTGGGAGAGGGAGGCCAGCATCAGGCAATTCTACGGTGTCATCTTCCCGTCGCTGCTCCAGCTGCCGAGTGGGATAACTGAATTGGACGACAGGAAGCAGAGGAGGCTGTGCCTTCAGAAGTTCAGGAAGGTGGAGGAGAGGGTCTCGGAGGTGGATTTGGAGAGGGAGCTCGAGTGCGGCATCTGCCTCGAGGTGAATGCCAAGATTGTGCTGCCCGATTGCGCGCACTCGCTGTGCATGAGATGCTTCGAGGATTGGAACACCAAATCAAAGTCGTGCCCCTTCTGCCGCGCCTGCCTCAAGAAGGTGAATCCGAGCAGCCTGTGGTTGTACACCGACGACCGCGATGTTGTGGATATGGATACGTTGACTAGGGAGAACATTAGGCGCCTGTTCATGTTCATAAGTAAGCTTCCACTTGTAGTGCTCCATGTGGTTGACCTTGACATTTACGAGTACCGTATCAAGTGA - >LOC_Os10g30850.1
ATGCGGAGGAGGTTCCAGGACTCCGTCAAGGCCCTCGAGGCCGACATCGAGCACGCCAATGAGCTGGCGTCGGAGTTCTTGCGGGATTACGACGGGGCGGTGATCCAGATGCGGATGGCGTACAGCGCCGTCGCGCACTTCCTCGTGCAGTGGATCGACTGCAAGCTCGCCGGCGCGCTCGGCCTCCTCAAGATCATGATCTACAAGGTGTACGCCGATGGCACCACGGCTCTGCCGGAGTGGGAGAGGGAGGCCAGCATCAGGCAATTCTACGGTGTCATCTTCCCGTCGCTGCTCCAGCTGCCGAGTGGGATAACTGAATTGGACGACAGGAAGCAGAGGAGGCTGTGCCTTCAGAAGTTCAGGAAGGTGGAGGAGAGGGTCTCGGAGGTGGATTTGGAGAGGGAGCTCGAGTGCGGCATCTGCCTCGAGGTGAATGCCAAGATTGTGCTGCCCGATTGCGCGCACTCGCTGTGCATGAGATGCTTCGAGGATTGGAACACCAAATCAAAGTCGTGCCCCTTCTGCCGCGCCTGCCTCAAGAAGGTGAATCCGAGCAGCCTGTGGTTGTACACCGACGACCGCGATGTTGTGGATATGGATACGTTGACTAGGGAGAACATTAGGCGCCTGTTCATGTTCATAAGTAAGCTTCCACTTGTAGTGCTCCATGTGGTTGACCTTGACATTTACGAGTACCGTATCAAGTGA
Protein Sequence
- >LOC_Os10g30850.2
MRRRFQDSVKALEADIEHANELASEFLRDYDGAVIQMRMAYSAVAHFLVQWIDCKLAGALGLLKIMIYKVYADGTTALPEWEREASIRQFYGVIFPSLLQLPSGITELDDRKQRRLCLQKFRKVEERVSEVDLERELECGICLEVNAKIVLPDCAHSLCMRCFEDWNTKSKSCPFCRACLKKVNPSSLWLYTDDRDVVDMDTLTRENIRRLFMFISKLPLVVLHVVDLDIYEYRIK* - >LOC_Os10g30850.1
MRRRFQDSVKALEADIEHANELASEFLRDYDGAVIQMRMAYSAVAHFLVQWIDCKLAGALGLLKIMIYKVYADGTTALPEWEREASIRQFYGVIFPSLLQLPSGITELDDRKQRRLCLQKFRKVEERVSEVDLERELECGICLEVNAKIVLPDCAHSLCMRCFEDWNTKSKSCPFCRACLKKVNPSSLWLYTDDRDVVDMDTLTRENIRRLFMFISKLPLVVLHVVDLDIYEYRIK*