Information report for SSIIC
Gene Details
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Functional Descriptions
Literature and News
- Knockout of a starch synthase gene OsSSIIIa/Flo5 causes white-core floury endosperm in rice (Oryza sativa L.) . DOI: 10.1007/s00299-007-0309-8 ; PMID: 17297616
- Genetic diversity and domestication history of African rice (Oryza glaberrima) as inferred from multiple gene sequences . DOI: 10.1007/s00122-011-1563-2 ; PMID: 21400109
- Allelic diversities in rice starch biosynthesis lead to a diverse array of rice eating and cooking qualities . DOI: 10.1073/pnas.0912396106 ; PMID: 20018713
- Genetic analysis of starch paste viscosity parameters in glutinous rice (Oryza sativa L.) . DOI: 10.1007/s00122-010-1423-5 ; PMID: 20737264
Gene Resources
- UniProt: D0TZN5
- EMBL: GQ150956, GQ150958, GQ150960
- AlphaFoldDB: D0TZN5
- EnsemblPlants: Os10t0437600-01
- Gramene: Os10t0437600-01
- KEGG: dosa:Os10g0437600
- Orthologous matrix: CYSPGCH
- InterPro: IPR011835, IPR013534
- PANTHER: PTHR45825, PTHR45825:SF2
- SUPFAM: SSF53756
- Gene3D: 3.40.50.2000
- OrthoDB: D0TZN5
- SWISS-MODEL: D0TZN5
- Conserved Domain Database: cd03791
Sequences
cDNA Sequence
- >LOC_Os10g30156.1
AAATCGTGGAACTCAACGGGAGTCTCCTCGCGAGGTCGAGTGGACTCCACCACCTTCTCCTCCTCCACTCCAAGCCCACGAATTCGGATCAGCGCCGCCGCCGCCGCCGCCGCCGCCGCGGGAGGAGGGCTCGCCGATTCCACTACTTCACTCCAGTAGGTGGCCAACGCGCGGGGTGGGAGCAGCAGCGACGACCTCCAATGGCGGCGGCGGCCGTCTCCTCCCTCCTCGCCCCTTCGGGATCCTGCTACTCCCCCGGATGCCACAGCTGCTGGGGTCCCGGGCCCGGAGGCGGGCGGCGCCTACCTTCCCCGCGCCGGCGCCCGATTACCGCCGCGGCTCGCCCTACTTGGGCAGTGCCGAGGAGGAGCAGGTTGGAGTGGGGGCGTGTGGAGGCTCAGAATTCGGGCGCTCGCACCAGCTGCCGAGCAGCACTGCAATGGCTATCATCCACGGCAAGGTCCCATGTGAATGTTGGTTATGGGTCGCCGCTGGTGTTCCCAGGTTTGACCAAACCGGGGTCAAGCAGGTGTCTATGCGTTGTTGGAATGGTCGGCAATGCAGGGAATCAAGTTGGTGACGATAGTGATGATGGAATCAAGGTTACCAATGAGAAGCTTCGTGCTGTTATCCGCAAGAGCAAAGAGGTGTTGGAGATCCATCGGAATCTACTTGAGAAGATATCGGCATCAGAAAGGAAGAAGATCACTTCAATTATAGAGGACAGTTCCATTTATAATGAGCAAGATCCATTTGGTCAAAGAGATAGTTCTTTTTATCATCTTGATGAAGTTCCAGACGATGATGAATTTAGCTATGACCTACAGATGTACCTTGATAGACGTCCAGATCAATCTGAAGTTGTTGCAACTCAGGATTATGAGGCACAACTAAGTCAAATAAGTGAAATGGGACAGTCAGTTGCTGAGGGCACTAGTGATGATCCATCTGCTTCAGCTGCTGTAGATCTTATCAATATCATATTGGTAGCGGCGGAGTGTGCTCCTTGGTCCAAAACAGGTGGGCTTGGAGATGTTGCTGGAGCTTTGCCAAAGGCTTTGGCTAGGAGAGGTCACCGTGTCATGGTAGTAGTGCCAATGTATAAAAACTACGCAGAACCTCAACAGCTAGGAGAGCCAAGGAGATACCAGGTTGCAGGGCAGGATATGGAGGTAATTTATTATCATGCATACATAGATGGTGTGGATTTTGTTTTCATTGACAATCCTATCTTCCACCACGTTGAGAATGACATTTATGGCGGAGACCGAACAGACATCTTAAAACGGATGGTTTTGTTGTGCAAAGCGGCTATAGAGGTTCCATGGTATGTTCCTTGTGGTGGCTACTGCTACGGTGATGGAAATCTTGTGTTCCTTGCAAATGATTGGCATACTGCACTACTGCCTGTTTATTTGAAGGCATACTATCATGACAATGGTTTCATGATATATGCCCGTTCTGTTCTTGTCATACACAATATAGCACATCAGGGTCGTGGCCCATTAGATGACTTCAGTTATCTGGATTTGCCAGTTGATTACATGGATCTTTTCAAACTTTATGACCCATTTGGGGGTGATCACCTAAACATATTTGCAGCTGGTATTAAAGCTGCTGACCGTTTGCTTACTGTAAGCCATGGTTATGCATGGGAGCTCAAAACAGCTGAAGGTGGTTGGGGTCTTCATGGGATCATCAATGAAAGCGATTGGAAATTTCAGGGCATTGTAAATGGCATTGATACAACTGATTGGAATCCTAGGTGTGATATCCACCTAAAATCTGATGGGTACACCAATTATTCTCTAGAAACAGTTCAGGCAGGTAAACAGCAATGTAAGGCAGCATTGCAGAAGGAACTTGGTCTCCCAGTTCGTGGCGATGTTCCTGTCATTGCTTTCATTGGACGGCTAGACCATCAAAAAGGTGTAGACCTTATAGCAGAAGCAATGCCATGGATTGCTGGCCAAGATGTACAGTTAATAATGTTGGGCACTGGACGGCAAGACCTCGAAGATACATTGAGGAGGCTTGAGAGCCAACATTACGATAGAGTTAGGGGGTGGGTTGGTTTTTCCATCAGGTTGGCTCATCGAATGACAGCAGGGGCTGATATACTATTGATGCCATCAAGGTTTGAGCCATGTGGATTGAATCAGCTCTATGCCATGATGTATGGGACTGTCCCAGTAGTCCATGCGGTCGGTGGTCTTCGAGACACCGTTGAGCACTACAATCCCTACGAGGAGTCCGGACTTGGTTGGACTTTTGAAAAGGCAGAGGCAAACAGACTGATTGATGCTCTAGGGCACTGCTTGAACACGTACAGGAACTACAGGACTAGTTGGGAGGGACTCCAAAAGAGAGGGATGATGCAAGATCTAAGTTGGGATAATGCTGCTAAGCTGTATGAGGAAGTCCTCCTAGCTGCCAAGTATCAATGGTGATCAGTCCAAGAAGACCTCGACGGTTGTTCAGTCATTCATGACCGAAATGCCTTTTTCTCGTGTCAGCTGCTCAGATGCGGCCACCATCTAGTTCCATGGCTTACATCTTCCTGTGATTTGGATGAACAGAGTTTTTTTGTCAGATCTGACATCATTTTCAAGAAGGCACATGATGAACCTACTTCCCAGGTGAATACAGCAGCGGACGATGCCTTTGTTGGAAGGTGGCAAAACACATGGAAGATTCAGCCGTCTGCCAGCATGCACCTCTGTCCTAAGGAGAGGCTCCAAGCCCCATTGTGCGCTCTGGAGAGGCTCCAAACCACCATTGTTCGCCCCTGGGTAGGTTGTTGAGCTCGGTTAGATGCTTTTAGTACAGTAGAATAGCAGATACTAGCGGATAGACTAGTTGATATTTCCCCTATGCACCGAGTGGTTCGGTTGTACCTTATTTTTTTCTTGGCTCTTGTTGTCCAGTTCTTCGATCTTTAGACGATTAGCGTCCCGGGATTTCCCAGATGACATTGACATTGATACTAGTGGGAATTTCCCCTGCAAATTTACTGTCAGCTTTTCCATTGGTCTGCAGCTATGATCAGTTAAACCCGTGGATCCCA
CDS Sequence
- >LOC_Os10g30156.1
ATGGCGGCGGCGGCCGTCTCCTCCCTCCTCGCCCCTTCGGGATCCTGCTACTCCCCCGGATGCCACAGCTGCTGGGGTCCCGGGCCCGGAGGCGGGCGGCGCCTACCTTCCCCGCGCCGGCGCCCGATTACCGCCGCGGCTCGCCCTACTTGGGCAGTGCCGAGGAGGAGCAGGTTGGAGTGGGGGCGTGTGGAGGCTCAGAATTCGGGCGCTCGCACCAGCTGCCGAGCAGCACTGCAATGGCTATCATCCACGGCAAGGTCCCATGTGAATGTTGGTTATGGGTCGCCGCTGGTGTTCCCAGGTTTGACCAAACCGGGGTCAAGCAGGTGTCTATGCGTTGTTGGAATGGTCGGCAATGCAGGGAATCAAGTTGGTGACGATAGTGATGATGGAATCAAGGTTACCAATGAGAAGCTTCGTGCTGTTATCCGCAAGAGCAAAGAGGTGTTGGAGATCCATCGGAATCTACTTGAGAAGATATCGGCATCAGAAAGGAAGAAGATCACTTCAATTATAGAGGACAGTTCCATTTATAATGAGCAAGATCCATTTGGTCAAAGAGATAGTTCTTTTTATCATCTTGATGAAGTTCCAGACGATGATGAATTTAGCTATGACCTACAGATGTACCTTGATAGACGTCCAGATCAATCTGAAGTTGTTGCAACTCAGGATTATGAGGCACAACTAAGTCAAATAAGTGAAATGGGACAGTCAGTTGCTGAGGGCACTAGTGATGATCCATCTGCTTCAGCTGCTGTAGATCTTATCAATATCATATTGGTAGCGGCGGAGTGTGCTCCTTGGTCCAAAACAGGTGGGCTTGGAGATGTTGCTGGAGCTTTGCCAAAGGCTTTGGCTAGGAGAGGTCACCGTGTCATGGTAGTAGTGCCAATGTATAAAAACTACGCAGAACCTCAACAGCTAGGAGAGCCAAGGAGATACCAGGTTGCAGGGCAGGATATGGAGGTAATTTATTATCATGCATACATAGATGGTGTGGATTTTGTTTTCATTGACAATCCTATCTTCCACCACGTTGAGAATGACATTTATGGCGGAGACCGAACAGACATCTTAAAACGGATGGTTTTGTTGTGCAAAGCGGCTATAGAGGTTCCATGGTATGTTCCTTGTGGTGGCTACTGCTACGGTGATGGAAATCTTGTGTTCCTTGCAAATGATTGGCATACTGCACTACTGCCTGTTTATTTGAAGGCATACTATCATGACAATGGTTTCATGATATATGCCCGTTCTGTTCTTGTCATACACAATATAGCACATCAGGGTCGTGGCCCATTAGATGACTTCAGTTATCTGGATTTGCCAGTTGATTACATGGATCTTTTCAAACTTTATGACCCATTTGGGGGTGATCACCTAAACATATTTGCAGCTGGTATTAAAGCTGCTGACCGTTTGCTTACTGTAAGCCATGGTTATGCATGGGAGCTCAAAACAGCTGAAGGTGGTTGGGGTCTTCATGGGATCATCAATGAAAGCGATTGGAAATTTCAGGGCATTGTAAATGGCATTGATACAACTGATTGGAATCCTAGGTGTGATATCCACCTAAAATCTGATGGGTACACCAATTATTCTCTAGAAACAGTTCAGGCAGGTAAACAGCAATGTAAGGCAGCATTGCAGAAGGAACTTGGTCTCCCAGTTCGTGGCGATGTTCCTGTCATTGCTTTCATTGGACGGCTAGACCATCAAAAAGGTGTAGACCTTATAGCAGAAGCAATGCCATGGATTGCTGGCCAAGATGTACAGTTAATAATGTTGGGCACTGGACGGCAAGACCTCGAAGATACATTGAGGAGGCTTGAGAGCCAACATTACGATAGAGTTAGGGGGTGGGTTGGTTTTTCCATCAGGTTGGCTCATCGAATGACAGCAGGGGCTGATATACTATTGATGCCATCAAGGTTTGAGCCATGTGGATTGAATCAGCTCTATGCCATGATGTATGGGACTGTCCCAGTAGTCCATGCGGTCGGTGGTCTTCGAGACACCGTTGAGCACTACAATCCCTACGAGGAGTCCGGACTTGGTTGGACTTTTGAAAAGGCAGAGGCAAACAGACTGATTGATGCTCTAGGGCACTGCTTGAACACGTACAGGAACTACAGGACTAGTTGGGAGGGACTCCAAAAGAGAGGGATGATGCAAGATCTAAGTTGGGATAATGCTGCTAAGCTGTATGAGGAAGTCCTCCTAGCTGCCAAGTATCAATGGTGA
Protein Sequence
- >LOC_Os10g30156.1
MAAAAVSSLLAPSGSCYSPGCHSCWGPGPGGGRRLPSPRRRPITAAARPTWAVPRRSRLEWGRVEAQNSGARTSCRAALQWLSSTARSHVNVGYGSPLVFPGLTKPGSSRCLCVVGMVGNAGNQVGDDSDDGIKVTNEKLRAVIRKSKEVLEIHRNLLEKISASERKKITSIIEDSSIYNEQDPFGQRDSSFYHLDEVPDDDEFSYDLQMYLDRRPDQSEVVATQDYEAQLSQISEMGQSVAEGTSDDPSASAAVDLINIILVAAECAPWSKTGGLGDVAGALPKALARRGHRVMVVVPMYKNYAEPQQLGEPRRYQVAGQDMEVIYYHAYIDGVDFVFIDNPIFHHVENDIYGGDRTDILKRMVLLCKAAIEVPWYVPCGGYCYGDGNLVFLANDWHTALLPVYLKAYYHDNGFMIYARSVLVIHNIAHQGRGPLDDFSYLDLPVDYMDLFKLYDPFGGDHLNIFAAGIKAADRLLTVSHGYAWELKTAEGGWGLHGIINESDWKFQGIVNGIDTTDWNPRCDIHLKSDGYTNYSLETVQAGKQQCKAALQKELGLPVRGDVPVIAFIGRLDHQKGVDLIAEAMPWIAGQDVQLIMLGTGRQDLEDTLRRLESQHYDRVRGWVGFSIRLAHRMTAGADILLMPSRFEPCGLNQLYAMMYGTVPVVHAVGGLRDTVEHYNPYEESGLGWTFEKAEANRLIDALGHCLNTYRNYRTSWEGLQKRGMMQDLSWDNAAKLYEEVLLAAKYQW*