Gene Details:
- MSU gene ID: LOC_Os10g25130
- RAPdb gene ID: Os10g0390500
- Gene Symbol: AlaAT OsAlaAT1
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- These results suggest that AlaAT is involved in nitrogen metabolism during the maturation of rice seed.
- A cDNA clone encoding alanine aminotransferase (AlaAT) has isolated from randomly sequenced clones derived from a cDNA library of maturing rice seeds by comparison to previously identified genes.
- OsAlaAT1 is predominantly expressed in developing seeds during active starch synthesis.
- Thus, our observations suggest that OsAlaAT1 plays an essential role in starch synthesis in developing seeds that are exposed to low concentrations of oxygen.
- Alanine aminotransferase (OsAlaAT1) modulates nitrogen utilization, grain yield, and quality in rice.
Function-related keywords:
Literature:
- Molecular characterization of a gene for alanine aminotransferase from rice (Oryza sativa) . DOI: 10.1023/a:1006156214716 ; PMID: 10080717
- Alanine aminotransferase 1 (OsAlaAT1) plays an essential role in the regulation of starch storage in rice endosperm . DOI: 10.1016/j.plantsci.2015.07.027 ; PMID: 26475189
- Bin-based genome-wide association studies reveal superior alleles for improvement of appearance quality using a 4-way MAGIC population in rice . DOI: 10.1016/j.jare.2020.08.001 ; PMID: 33364055
Related News:
Gene Resources:
- NCBI ID: AB007404
- UniProt accessions:
Sequences:
cDNA Sequence
- >LOC_Os10g25130.1
TGTCACTAAAAGGTTAGACTTTTTTGGGTTCTTGTGCAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATTGTGGATGCGAAAACCGCAGCTGGGGGCGGCGGTTCTGCGTCCTCGGTCGCTTTCCATCCGGTGGGCGCATCGCGTTTTTGCGGTTTTTGCTTCTCTTCTTCTTTATAAGGAGCAGCCAATTTGGTGCGGGGAGCCGTCGATTCGCCACGAAACCCAACCCGTCAACGCTGCCGCTGAATCTCACTTTCTCTCTCTGTTCTTGGTGCTTCCGCCGCCATGGCTGCTCCCAGCGTCGCCGTCGACAACCTCAACCCCAAGGTTTTGAATTGTGAGTATGCAGTGCGTGGAGAGATTGTGATCCATGCTCAGCGCCTGCAGCAACAGCTACAGACTCAACCAGGGTCTCTTCCTTTTGATGAGATCCTATACTGCAACATTGGGAATCCCCAGTCTCTTGGTCAGAAGCCAGTTACATTCTTCAGGGAGGTTATTGCTCTTTGTGATCATCCATGCTTGTTGGAAAAGGAGGAAACCAAATCATTGTTCAGTGCTGATGCCATTTCTCGAGCAACAACAATTCTTGCCTCGATTCCTGGAAGAGCAACTGGAGCATACAGCCACAGCCAGGGCATCAAAGGGCTGCGTGATGCAATTGCTGCTGGAATTGCATCACGTGACGGATACCCTGCAAATGCAGACGACATTTTCCTTACTGACGGAGCAAGCCCTGGAGTTCACATGATGATGCAGTTACTGATAAGGAACGAGAAAGATGGCATTCTCTGCCCAATTCCTCAATATCCTTTGTACTCAGCCTCCATTGCTCTTCATGGTGGAGCTCTTGTCCCGTATTATCTTAATGAATCAACAGGCTGGGGTTTGGAGATCTCTGACCTTAAGAAGCAACTCGAAGATTCTCGGTTGAAAGGCATTGATGTTAGGGCTTTGGTAGTTATCAATCCAGGAAATCCAACTGGGCAGGTTCTTGCTGAGGAAAACCAACGGGACATAGTGAAGTTCTGCAAAAATGAGGGACTTGTTCTTCTGGCTGATGAGGTGTACCAAGAGAACATCTATGTTGACAACAAGAAATTTAACTCTTTCAAGAAGATAGCGAGATCCATGGGATACAACGAGGATGATCTCCCTTTAGTATCATTTCAATCTGTTTCTAAGGGATATTATGGTGAATGTGGCAAAAGAGGAGGCTACATGGAGATTACTGGCTTCAGTGCTCCAGTTAGAGAGCAGATCTACAAAGTGGCGTCAGTGAACTTATGTTCCAATATCACTGGCCAGATCCTTGCCAGCCTCGTCATGAATCCACCAAAGGCTGGAGATGCATCATATGCTTCATACAAGGCAGAGAAAGATGGAATCCTCCAATCATTAGCTCGCCGTGCAAAGGCATTGGAGAATGCTTTCAACAGTCTTGAGGGAATTACATGCAACAAAACTGAAGGAGCAATGTACCTCTTCCCTCAGCTTAGTCTGCCACAAAAGGCAATTGACGCTGCTAAAGCTGCTAACAAAGCACCTGATGCTTTCTATGCCCTTCGTCTCCTCGAGGCAACCGGAATTGTTGTTGTCCCTGGATCTGGATTTGGCCAAGTTCCTGGCACATGGCACATCAGATGCACAATCCTGCCACAGGAGGAGAAGATCCCCGCGATCATCTCCCGCTTCAAGGCATTCCATGAGGGCTTCATGGCAGCGTACCGCGACTGAATTGCCATTCACCATTGAACAGATGGGGAGTTCTATACAAGCCTGATGGATTTTCCCCAGGCCTTCTTTTTTTTTGTCCCCATGATAGCATCATCGTGTAGACCAAAACAAAATAAATCAAAGCCAGACATGCTTTTTTTTAGTGTGCTAATCACAGAGGGTACTGAAAAACTGATGCCTTCGATGGCAAATTGAGGAGAAATTTACCTGCCATTTCGTTGTTGTGCCTGTTACTGTATAAATGTTAAGATTTTGGTGCAGAGGCAGCTATAGTTTTGAGATGTTGGAGTTGGCTGAACTGTATGAGAATGGCTTGATCTGATTGTGAGACCCACCAGCTATTCATCTCTGATTTGAATAGCGTTGGTTGGTAGGAGTGCTGCTGAACAAAATGCTCTGAATAAAATGAGACCTTTCAGTGTCTTTTACTCT
CDS Sequence
- >LOC_Os10g25130.1
ATGGCTGCTCCCAGCGTCGCCGTCGACAACCTCAACCCCAAGGTTTTGAATTGTGAGTATGCAGTGCGTGGAGAGATTGTGATCCATGCTCAGCGCCTGCAGCAACAGCTACAGACTCAACCAGGGTCTCTTCCTTTTGATGAGATCCTATACTGCAACATTGGGAATCCCCAGTCTCTTGGTCAGAAGCCAGTTACATTCTTCAGGGAGGTTATTGCTCTTTGTGATCATCCATGCTTGTTGGAAAAGGAGGAAACCAAATCATTGTTCAGTGCTGATGCCATTTCTCGAGCAACAACAATTCTTGCCTCGATTCCTGGAAGAGCAACTGGAGCATACAGCCACAGCCAGGGCATCAAAGGGCTGCGTGATGCAATTGCTGCTGGAATTGCATCACGTGACGGATACCCTGCAAATGCAGACGACATTTTCCTTACTGACGGAGCAAGCCCTGGAGTTCACATGATGATGCAGTTACTGATAAGGAACGAGAAAGATGGCATTCTCTGCCCAATTCCTCAATATCCTTTGTACTCAGCCTCCATTGCTCTTCATGGTGGAGCTCTTGTCCCGTATTATCTTAATGAATCAACAGGCTGGGGTTTGGAGATCTCTGACCTTAAGAAGCAACTCGAAGATTCTCGGTTGAAAGGCATTGATGTTAGGGCTTTGGTAGTTATCAATCCAGGAAATCCAACTGGGCAGGTTCTTGCTGAGGAAAACCAACGGGACATAGTGAAGTTCTGCAAAAATGAGGGACTTGTTCTTCTGGCTGATGAGGTGTACCAAGAGAACATCTATGTTGACAACAAGAAATTTAACTCTTTCAAGAAGATAGCGAGATCCATGGGATACAACGAGGATGATCTCCCTTTAGTATCATTTCAATCTGTTTCTAAGGGATATTATGGTGAATGTGGCAAAAGAGGAGGCTACATGGAGATTACTGGCTTCAGTGCTCCAGTTAGAGAGCAGATCTACAAAGTGGCGTCAGTGAACTTATGTTCCAATATCACTGGCCAGATCCTTGCCAGCCTCGTCATGAATCCACCAAAGGCTGGAGATGCATCATATGCTTCATACAAGGCAGAGAAAGATGGAATCCTCCAATCATTAGCTCGCCGTGCAAAGGCATTGGAGAATGCTTTCAACAGTCTTGAGGGAATTACATGCAACAAAACTGAAGGAGCAATGTACCTCTTCCCTCAGCTTAGTCTGCCACAAAAGGCAATTGACGCTGCTAAAGCTGCTAACAAAGCACCTGATGCTTTCTATGCCCTTCGTCTCCTCGAGGCAACCGGAATTGTTGTTGTCCCTGGATCTGGATTTGGCCAAGTTCCTGGCACATGGCACATCAGATGCACAATCCTGCCACAGGAGGAGAAGATCCCCGCGATCATCTCCCGCTTCAAGGCATTCCATGAGGGCTTCATGGCAGCGTACCGCGACTGA
Protein Sequence
- >LOC_Os10g25130.1
MAAPSVAVDNLNPKVLNCEYAVRGEIVIHAQRLQQQLQTQPGSLPFDEILYCNIGNPQSLGQKPVTFFREVIALCDHPCLLEKEETKSLFSADAISRATTILASIPGRATGAYSHSQGIKGLRDAIAAGIASRDGYPANADDIFLTDGASPGVHMMMQLLIRNEKDGILCPIPQYPLYSASIALHGGALVPYYLNESTGWGLEISDLKKQLEDSRLKGIDVRALVVINPGNPTGQVLAEENQRDIVKFCKNEGLVLLADEVYQENIYVDNKKFNSFKKIARSMGYNEDDLPLVSFQSVSKGYYGECGKRGGYMEITGFSAPVREQIYKVASVNLCSNITGQILASLVMNPPKAGDASYASYKAEKDGILQSLARRAKALENAFNSLEGITCNKTEGAMYLFPQLSLPQKAIDAAKAANKAPDAFYALRLLEATGIVVVPGSGFGQVPGTWHIRCTILPQEEKIPAIISRFKAFHEGFMAAYRD*