Information report for AlaAT;OsAlaAT1
Gene Details
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Functional Descriptions
- These results suggest that AlaAT is involved in nitrogen metabolism during the maturation of rice seed.
- A cDNA clone encoding alanine aminotransferase (AlaAT) has isolated from randomly sequenced clones derived from a cDNA library of maturing rice seeds by comparison to previously identified genes.
- OsAlaAT1 is predominantly expressed in developing seeds during active starch synthesis.
- Thus, our observations suggest that OsAlaAT1 plays an essential role in starch synthesis in developing seeds that are exposed to low concentrations of oxygen.
- Alanine aminotransferase (OsAlaAT1) modulates nitrogen utilization, grain yield, and quality in rice.
Functional Keywords
Literature and News
- Molecular characterization of a gene for alanine aminotransferase from rice (Oryza sativa) . DOI: 10.1023/a:1006156214716 ; PMID: 10080717
- Alanine aminotransferase 1 (OsAlaAT1) plays an essential role in the regulation of starch storage in rice endosperm . DOI: 10.1016/j.plantsci.2015.07.027 ; PMID: 26475189
- Bin-based genome-wide association studies reveal superior alleles for improvement of appearance quality using a 4-way MAGIC population in rice . DOI: 10.1016/j.jare.2020.08.001 ; PMID: 33364055
Gene Resources
- UniProt: Q338N8
- EMBL: DP000086, EU267962, KM051842
- AlphaFoldDB: Q338N8
- EnsemblPlants: Os10t0390500-01
- Gramene: Os10t0390500-01
- KEGG: osa:4348524
- InterPro: IPR004839, IPR015421, IPR015422
- PANTHER: PTHR11751, PTHR11751:SF479
- SUPFAM: SSF53383
- Gene3D: 1.10.287.1970, 3.40.640.10, 3.90.1150.10
- OrthoDB: Q338N8
- SWISS-MODEL: Q338N8
- Conserved Domain Database: cd00609
Homologs
- Actinidia chinensis: Achn093911
- Arabidopsis thaliana: AT1G01480, AT3G49700
- Daucus carota: DCAR_026433, DCAR_016094
Sequences
cDNA Sequence
- >LOC_Os10g25130.1
TGTCACTAAAAGGTTAGACTTTTTTGGGTTCTTGTGCAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATTGTGGATGCGAAAACCGCAGCTGGGGGCGGCGGTTCTGCGTCCTCGGTCGCTTTCCATCCGGTGGGCGCATCGCGTTTTTGCGGTTTTTGCTTCTCTTCTTCTTTATAAGGAGCAGCCAATTTGGTGCGGGGAGCCGTCGATTCGCCACGAAACCCAACCCGTCAACGCTGCCGCTGAATCTCACTTTCTCTCTCTGTTCTTGGTGCTTCCGCCGCCATGGCTGCTCCCAGCGTCGCCGTCGACAACCTCAACCCCAAGGTTTTGAATTGTGAGTATGCAGTGCGTGGAGAGATTGTGATCCATGCTCAGCGCCTGCAGCAACAGCTACAGACTCAACCAGGGTCTCTTCCTTTTGATGAGATCCTATACTGCAACATTGGGAATCCCCAGTCTCTTGGTCAGAAGCCAGTTACATTCTTCAGGGAGGTTATTGCTCTTTGTGATCATCCATGCTTGTTGGAAAAGGAGGAAACCAAATCATTGTTCAGTGCTGATGCCATTTCTCGAGCAACAACAATTCTTGCCTCGATTCCTGGAAGAGCAACTGGAGCATACAGCCACAGCCAGGGCATCAAAGGGCTGCGTGATGCAATTGCTGCTGGAATTGCATCACGTGACGGATACCCTGCAAATGCAGACGACATTTTCCTTACTGACGGAGCAAGCCCTGGAGTTCACATGATGATGCAGTTACTGATAAGGAACGAGAAAGATGGCATTCTCTGCCCAATTCCTCAATATCCTTTGTACTCAGCCTCCATTGCTCTTCATGGTGGAGCTCTTGTCCCGTATTATCTTAATGAATCAACAGGCTGGGGTTTGGAGATCTCTGACCTTAAGAAGCAACTCGAAGATTCTCGGTTGAAAGGCATTGATGTTAGGGCTTTGGTAGTTATCAATCCAGGAAATCCAACTGGGCAGGTTCTTGCTGAGGAAAACCAACGGGACATAGTGAAGTTCTGCAAAAATGAGGGACTTGTTCTTCTGGCTGATGAGGTGTACCAAGAGAACATCTATGTTGACAACAAGAAATTTAACTCTTTCAAGAAGATAGCGAGATCCATGGGATACAACGAGGATGATCTCCCTTTAGTATCATTTCAATCTGTTTCTAAGGGATATTATGGTGAATGTGGCAAAAGAGGAGGCTACATGGAGATTACTGGCTTCAGTGCTCCAGTTAGAGAGCAGATCTACAAAGTGGCGTCAGTGAACTTATGTTCCAATATCACTGGCCAGATCCTTGCCAGCCTCGTCATGAATCCACCAAAGGCTGGAGATGCATCATATGCTTCATACAAGGCAGAGAAAGATGGAATCCTCCAATCATTAGCTCGCCGTGCAAAGGCATTGGAGAATGCTTTCAACAGTCTTGAGGGAATTACATGCAACAAAACTGAAGGAGCAATGTACCTCTTCCCTCAGCTTAGTCTGCCACAAAAGGCAATTGACGCTGCTAAAGCTGCTAACAAAGCACCTGATGCTTTCTATGCCCTTCGTCTCCTCGAGGCAACCGGAATTGTTGTTGTCCCTGGATCTGGATTTGGCCAAGTTCCTGGCACATGGCACATCAGATGCACAATCCTGCCACAGGAGGAGAAGATCCCCGCGATCATCTCCCGCTTCAAGGCATTCCATGAGGGCTTCATGGCAGCGTACCGCGACTGAATTGCCATTCACCATTGAACAGATGGGGAGTTCTATACAAGCCTGATGGATTTTCCCCAGGCCTTCTTTTTTTTTGTCCCCATGATAGCATCATCGTGTAGACCAAAACAAAATAAATCAAAGCCAGACATGCTTTTTTTTAGTGTGCTAATCACAGAGGGTACTGAAAAACTGATGCCTTCGATGGCAAATTGAGGAGAAATTTACCTGCCATTTCGTTGTTGTGCCTGTTACTGTATAAATGTTAAGATTTTGGTGCAGAGGCAGCTATAGTTTTGAGATGTTGGAGTTGGCTGAACTGTATGAGAATGGCTTGATCTGATTGTGAGACCCACCAGCTATTCATCTCTGATTTGAATAGCGTTGGTTGGTAGGAGTGCTGCTGAACAAAATGCTCTGAATAAAATGAGACCTTTCAGTGTCTTTTACTCT
CDS Sequence
- >LOC_Os10g25130.1
ATGGCTGCTCCCAGCGTCGCCGTCGACAACCTCAACCCCAAGGTTTTGAATTGTGAGTATGCAGTGCGTGGAGAGATTGTGATCCATGCTCAGCGCCTGCAGCAACAGCTACAGACTCAACCAGGGTCTCTTCCTTTTGATGAGATCCTATACTGCAACATTGGGAATCCCCAGTCTCTTGGTCAGAAGCCAGTTACATTCTTCAGGGAGGTTATTGCTCTTTGTGATCATCCATGCTTGTTGGAAAAGGAGGAAACCAAATCATTGTTCAGTGCTGATGCCATTTCTCGAGCAACAACAATTCTTGCCTCGATTCCTGGAAGAGCAACTGGAGCATACAGCCACAGCCAGGGCATCAAAGGGCTGCGTGATGCAATTGCTGCTGGAATTGCATCACGTGACGGATACCCTGCAAATGCAGACGACATTTTCCTTACTGACGGAGCAAGCCCTGGAGTTCACATGATGATGCAGTTACTGATAAGGAACGAGAAAGATGGCATTCTCTGCCCAATTCCTCAATATCCTTTGTACTCAGCCTCCATTGCTCTTCATGGTGGAGCTCTTGTCCCGTATTATCTTAATGAATCAACAGGCTGGGGTTTGGAGATCTCTGACCTTAAGAAGCAACTCGAAGATTCTCGGTTGAAAGGCATTGATGTTAGGGCTTTGGTAGTTATCAATCCAGGAAATCCAACTGGGCAGGTTCTTGCTGAGGAAAACCAACGGGACATAGTGAAGTTCTGCAAAAATGAGGGACTTGTTCTTCTGGCTGATGAGGTGTACCAAGAGAACATCTATGTTGACAACAAGAAATTTAACTCTTTCAAGAAGATAGCGAGATCCATGGGATACAACGAGGATGATCTCCCTTTAGTATCATTTCAATCTGTTTCTAAGGGATATTATGGTGAATGTGGCAAAAGAGGAGGCTACATGGAGATTACTGGCTTCAGTGCTCCAGTTAGAGAGCAGATCTACAAAGTGGCGTCAGTGAACTTATGTTCCAATATCACTGGCCAGATCCTTGCCAGCCTCGTCATGAATCCACCAAAGGCTGGAGATGCATCATATGCTTCATACAAGGCAGAGAAAGATGGAATCCTCCAATCATTAGCTCGCCGTGCAAAGGCATTGGAGAATGCTTTCAACAGTCTTGAGGGAATTACATGCAACAAAACTGAAGGAGCAATGTACCTCTTCCCTCAGCTTAGTCTGCCACAAAAGGCAATTGACGCTGCTAAAGCTGCTAACAAAGCACCTGATGCTTTCTATGCCCTTCGTCTCCTCGAGGCAACCGGAATTGTTGTTGTCCCTGGATCTGGATTTGGCCAAGTTCCTGGCACATGGCACATCAGATGCACAATCCTGCCACAGGAGGAGAAGATCCCCGCGATCATCTCCCGCTTCAAGGCATTCCATGAGGGCTTCATGGCAGCGTACCGCGACTGA
Protein Sequence
- >LOC_Os10g25130.1
MAAPSVAVDNLNPKVLNCEYAVRGEIVIHAQRLQQQLQTQPGSLPFDEILYCNIGNPQSLGQKPVTFFREVIALCDHPCLLEKEETKSLFSADAISRATTILASIPGRATGAYSHSQGIKGLRDAIAAGIASRDGYPANADDIFLTDGASPGVHMMMQLLIRNEKDGILCPIPQYPLYSASIALHGGALVPYYLNESTGWGLEISDLKKQLEDSRLKGIDVRALVVINPGNPTGQVLAEENQRDIVKFCKNEGLVLLADEVYQENIYVDNKKFNSFKKIARSMGYNEDDLPLVSFQSVSKGYYGECGKRGGYMEITGFSAPVREQIYKVASVNLCSNITGQILASLVMNPPKAGDASYASYKAEKDGILQSLARRAKALENAFNSLEGITCNKTEGAMYLFPQLSLPQKAIDAAKAANKAPDAFYALRLLEATGIVVVPGSGFGQVPGTWHIRCTILPQEEKIPAIISRFKAFHEGFMAAYRD*