Gene Details:
- MSU gene ID: LOC_Os10g22520
- RAPdb gene ID: Os10g0370500
- Gene Symbol: GH5BG
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- The GH5BG mRNA is highly expressed in the shoot during germination and in leaf sheaths of mature plants.
- The GH5BG was up-regulated in response to salt stress, submergence stress, methyl jasmonate and abscisic acid in rice seedlings.
Function-related keywords:
- sheath , seedling , leaf , jasmonate , salt , shoot , submergence , salt-stress
Literature:
- A stress-induced rice (Oryza sativa L.) beta-glucosidase represents a new subfamily of glycosyl hydrolase family 5 containing a fascin-like domain . DOI: 10.1042/BJ20070734 ; PMID: 17705786
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os10g22520.1
CCACATTTTTATTCTAAGCACGCACGTCTATCCATTAATTACGCAGTTCGTACACGCACATGCATCGATCGCTGCACTACGTTGTGTATATATATACATTGGCAAGCTGAGCTAAGATAGTCATCAAGAGCTGAAAAATCTTCGTCTTCATCATGCGCCATTTTGAGCTCCTCCTCTTCCTCCTCCTCTGCTCGCCGTGCCTCTTCTCAGTCTCCGATGGGAGGACGGTGCGGCCCGCGAAACGGGGCGCCCCGTCGCCCCCCATTCGGGCGGTGAACCTTGGAGGTTGGCTCGTCACGGAGGGCTGGATCCTTCCCTCCCTCTTCGACGACATTCCAAACAAAGACCTCCTGGATGGAACCCAGCTGCAATTCAAGTCGGTGACGCAGAACATGTACCTGTGCGCCGAGCAGGGCGGCGGCACCATCCTGGTGGCGAACCGGACGAGCGCCTCGGGGTGGGAGACCTTCAAGCTGTGGAGGATCGACGAGGACACGTTCGACCTCAGGGTGTTCGACAACCTGTTCGTCACCGTCGCCGGCGACGGGGTCACCGTCGTGGCGACGGTGGCGTCGCCGGGGCCCGGGGAGGCGTTCCAGATCGTGCGCAACGGCGACAAGACTCGCGCGCGCATCAGGGCACCCAATGGCATGTTCCTGCAGGCGAAGACAAGCGACTCAGTTACAGCAGATTATGATGGGGAGACAAATTGGGGCGACGATGACCCCTCTGTGTTTGTGGTCACTAGGGTAGGCGGTCTACAAGGGGAGTACCAAATATGCAATGGATATGGTAAAGCAAAGGCCACACAAGTGCTCAGGGAACACTGGCGCACATACATAGTTGAGAGCGACTTCAAGTTCATATCAACAAGTGGGCTAAACGCAGTGAGAATTCCAGTTGGATGGTGGATTGCTAGCGACCCCAATCCTCCTGCTCCTTTCGTTGGAGGATCCCTCCAAGCCTTGGATAATGCATTCAAATGGGCAGAGAAGTATAATTTGGGAGTCATTGTGGACCTGCACGCTGCACCTGGGTCGCAGAACCCGTTTGAGCACAGTGCCTCCAGAGATGGTTCACAGGACTGGGGCACCACGGATGCCAACATCGCCCAAACTGTCCAAGTCATCGATTTCCTCACACACAGATACGCGAGTAGCCCCAGCCTCCTGGCCGTGGAGCTCCTGAACGAGCCACTGGCACCCGGGGTGACTCTCCCGGCTCTCATGAGATACTACAAGGACGGCTACAACGCCGTCCGCAAGTACACCTCGACGGCGTACGTGGTCATGTCCAACCGCCTCTCCGCCAGCAACACGGAGCTCCTCGGCTTCGCCGCCGGCTTCCCCGGCGCCGTCCTCGACGTCCACTACTACAACCTCTTCACCAGCAGCTTCAACGGCCTCACCGTCGACCAGAACATCGACTACGTCAGGACCAACCGCTCCGACGAACTCAGCACCGTCACAAGGCCGAATGGGCCGCTGACGTTCGTGGGAGAGTGGGTGGCTGAGTGGAATGTGCAGGGAGCATCTAACCAGGATTATCAGAGGTTTGCACAAGCCCAGCTAGATGTTTATGGACGAGCTACCTTCGGATGGGCCTATTGGACTTACAAGAACGTCAACAACCACTGGAGCATGCAGTGGAATATCCAGAATGGGATCATCTCTCTCAAAAGCTAGAAATAATGACTAATAATTAAATATGTCTCTAGTTATCACCAATTAGAACACGTAAATAAGCCTAACCAAGGCCAATTAGTGAGTAATTACTGTTGCCTAATAATTGGAAATGTGTATGTACTTGCAGTCATATGTAATCCGTGAGCAAATAAGACGTTGCGGAAGCGCAGATAAAACGTCAGGTACTCAGGTTGAGTGTAACTTTCTCTTGTGAAGCTGAATTAAAGAAATAAAGATTCTTCTTCCTAGATGCTTACATTAA
CDS Sequence
- >LOC_Os10g22520.1
ATGCGCCATTTTGAGCTCCTCCTCTTCCTCCTCCTCTGCTCGCCGTGCCTCTTCTCAGTCTCCGATGGGAGGACGGTGCGGCCCGCGAAACGGGGCGCCCCGTCGCCCCCCATTCGGGCGGTGAACCTTGGAGGTTGGCTCGTCACGGAGGGCTGGATCCTTCCCTCCCTCTTCGACGACATTCCAAACAAAGACCTCCTGGATGGAACCCAGCTGCAATTCAAGTCGGTGACGCAGAACATGTACCTGTGCGCCGAGCAGGGCGGCGGCACCATCCTGGTGGCGAACCGGACGAGCGCCTCGGGGTGGGAGACCTTCAAGCTGTGGAGGATCGACGAGGACACGTTCGACCTCAGGGTGTTCGACAACCTGTTCGTCACCGTCGCCGGCGACGGGGTCACCGTCGTGGCGACGGTGGCGTCGCCGGGGCCCGGGGAGGCGTTCCAGATCGTGCGCAACGGCGACAAGACTCGCGCGCGCATCAGGGCACCCAATGGCATGTTCCTGCAGGCGAAGACAAGCGACTCAGTTACAGCAGATTATGATGGGGAGACAAATTGGGGCGACGATGACCCCTCTGTGTTTGTGGTCACTAGGGTAGGCGGTCTACAAGGGGAGTACCAAATATGCAATGGATATGGTAAAGCAAAGGCCACACAAGTGCTCAGGGAACACTGGCGCACATACATAGTTGAGAGCGACTTCAAGTTCATATCAACAAGTGGGCTAAACGCAGTGAGAATTCCAGTTGGATGGTGGATTGCTAGCGACCCCAATCCTCCTGCTCCTTTCGTTGGAGGATCCCTCCAAGCCTTGGATAATGCATTCAAATGGGCAGAGAAGTATAATTTGGGAGTCATTGTGGACCTGCACGCTGCACCTGGGTCGCAGAACCCGTTTGAGCACAGTGCCTCCAGAGATGGTTCACAGGACTGGGGCACCACGGATGCCAACATCGCCCAAACTGTCCAAGTCATCGATTTCCTCACACACAGATACGCGAGTAGCCCCAGCCTCCTGGCCGTGGAGCTCCTGAACGAGCCACTGGCACCCGGGGTGACTCTCCCGGCTCTCATGAGATACTACAAGGACGGCTACAACGCCGTCCGCAAGTACACCTCGACGGCGTACGTGGTCATGTCCAACCGCCTCTCCGCCAGCAACACGGAGCTCCTCGGCTTCGCCGCCGGCTTCCCCGGCGCCGTCCTCGACGTCCACTACTACAACCTCTTCACCAGCAGCTTCAACGGCCTCACCGTCGACCAGAACATCGACTACGTCAGGACCAACCGCTCCGACGAACTCAGCACCGTCACAAGGCCGAATGGGCCGCTGACGTTCGTGGGAGAGTGGGTGGCTGAGTGGAATGTGCAGGGAGCATCTAACCAGGATTATCAGAGGTTTGCACAAGCCCAGCTAGATGTTTATGGACGAGCTACCTTCGGATGGGCCTATTGGACTTACAAGAACGTCAACAACCACTGGAGCATGCAGTGGAATATCCAGAATGGGATCATCTCTCTCAAAAGCTAG
Protein Sequence
- >LOC_Os10g22520.1
MRHFELLLFLLLCSPCLFSVSDGRTVRPAKRGAPSPPIRAVNLGGWLVTEGWILPSLFDDIPNKDLLDGTQLQFKSVTQNMYLCAEQGGGTILVANRTSASGWETFKLWRIDEDTFDLRVFDNLFVTVAGDGVTVVATVASPGPGEAFQIVRNGDKTRARIRAPNGMFLQAKTSDSVTADYDGETNWGDDDPSVFVVTRVGGLQGEYQICNGYGKAKATQVLREHWRTYIVESDFKFISTSGLNAVRIPVGWWIASDPNPPAPFVGGSLQALDNAFKWAEKYNLGVIVDLHAAPGSQNPFEHSASRDGSQDWGTTDANIAQTVQVIDFLTHRYASSPSLLAVELLNEPLAPGVTLPALMRYYKDGYNAVRKYTSTAYVVMSNRLSASNTELLGFAAGFPGAVLDVHYYNLFTSSFNGLTVDQNIDYVRTNRSDELSTVTRPNGPLTFVGEWVAEWNVQGASNQDYQRFAQAQLDVYGRATFGWAYWTYKNVNNHWSMQWNIQNGIISLKS*