Information report for GH5BG
Gene Details
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Functional Descriptions
- The GH5BG mRNA is highly expressed in the shoot during germination and in leaf sheaths of mature plants.
- The GH5BG was up-regulated in response to salt stress, submergence stress, methyl jasmonate and abscisic acid in rice seedlings.
Functional Keywords
- sheath , seedling , leaf , jasmonate , salt , shoot , submergence , salt-stress
Literature and News
Gene Resources
- UniProt: Q0IY43
- EMBL: AC107314, AC113335, AP008216
- AlphaFoldDB: Q0IY43
- EnsemblPlants: Os10t0370500-01
- Gramene: Os10t0370500-01
- KEGG: dosa:Os10g0370500, osa:4348471
- Orthologous matrix: MDYHEYQ
- InterPro: IPR001547, IPR008999, IPR010431
- PANTHER: PTHR10551, PTHR10551:SF14
- SUPFAM: SSF50405, SSF51445
- PROSITE: PS00659
- Gene3D: 2.80.10.50, 3.20.20.80
- OrthoDB: Q0IY43
- SWISS-MODEL: Q0IY43
- Conserved Domain Database: cd00257
Sequences
cDNA Sequence
- >LOC_Os10g22520.1
CCACATTTTTATTCTAAGCACGCACGTCTATCCATTAATTACGCAGTTCGTACACGCACATGCATCGATCGCTGCACTACGTTGTGTATATATATACATTGGCAAGCTGAGCTAAGATAGTCATCAAGAGCTGAAAAATCTTCGTCTTCATCATGCGCCATTTTGAGCTCCTCCTCTTCCTCCTCCTCTGCTCGCCGTGCCTCTTCTCAGTCTCCGATGGGAGGACGGTGCGGCCCGCGAAACGGGGCGCCCCGTCGCCCCCCATTCGGGCGGTGAACCTTGGAGGTTGGCTCGTCACGGAGGGCTGGATCCTTCCCTCCCTCTTCGACGACATTCCAAACAAAGACCTCCTGGATGGAACCCAGCTGCAATTCAAGTCGGTGACGCAGAACATGTACCTGTGCGCCGAGCAGGGCGGCGGCACCATCCTGGTGGCGAACCGGACGAGCGCCTCGGGGTGGGAGACCTTCAAGCTGTGGAGGATCGACGAGGACACGTTCGACCTCAGGGTGTTCGACAACCTGTTCGTCACCGTCGCCGGCGACGGGGTCACCGTCGTGGCGACGGTGGCGTCGCCGGGGCCCGGGGAGGCGTTCCAGATCGTGCGCAACGGCGACAAGACTCGCGCGCGCATCAGGGCACCCAATGGCATGTTCCTGCAGGCGAAGACAAGCGACTCAGTTACAGCAGATTATGATGGGGAGACAAATTGGGGCGACGATGACCCCTCTGTGTTTGTGGTCACTAGGGTAGGCGGTCTACAAGGGGAGTACCAAATATGCAATGGATATGGTAAAGCAAAGGCCACACAAGTGCTCAGGGAACACTGGCGCACATACATAGTTGAGAGCGACTTCAAGTTCATATCAACAAGTGGGCTAAACGCAGTGAGAATTCCAGTTGGATGGTGGATTGCTAGCGACCCCAATCCTCCTGCTCCTTTCGTTGGAGGATCCCTCCAAGCCTTGGATAATGCATTCAAATGGGCAGAGAAGTATAATTTGGGAGTCATTGTGGACCTGCACGCTGCACCTGGGTCGCAGAACCCGTTTGAGCACAGTGCCTCCAGAGATGGTTCACAGGACTGGGGCACCACGGATGCCAACATCGCCCAAACTGTCCAAGTCATCGATTTCCTCACACACAGATACGCGAGTAGCCCCAGCCTCCTGGCCGTGGAGCTCCTGAACGAGCCACTGGCACCCGGGGTGACTCTCCCGGCTCTCATGAGATACTACAAGGACGGCTACAACGCCGTCCGCAAGTACACCTCGACGGCGTACGTGGTCATGTCCAACCGCCTCTCCGCCAGCAACACGGAGCTCCTCGGCTTCGCCGCCGGCTTCCCCGGCGCCGTCCTCGACGTCCACTACTACAACCTCTTCACCAGCAGCTTCAACGGCCTCACCGTCGACCAGAACATCGACTACGTCAGGACCAACCGCTCCGACGAACTCAGCACCGTCACAAGGCCGAATGGGCCGCTGACGTTCGTGGGAGAGTGGGTGGCTGAGTGGAATGTGCAGGGAGCATCTAACCAGGATTATCAGAGGTTTGCACAAGCCCAGCTAGATGTTTATGGACGAGCTACCTTCGGATGGGCCTATTGGACTTACAAGAACGTCAACAACCACTGGAGCATGCAGTGGAATATCCAGAATGGGATCATCTCTCTCAAAAGCTAGAAATAATGACTAATAATTAAATATGTCTCTAGTTATCACCAATTAGAACACGTAAATAAGCCTAACCAAGGCCAATTAGTGAGTAATTACTGTTGCCTAATAATTGGAAATGTGTATGTACTTGCAGTCATATGTAATCCGTGAGCAAATAAGACGTTGCGGAAGCGCAGATAAAACGTCAGGTACTCAGGTTGAGTGTAACTTTCTCTTGTGAAGCTGAATTAAAGAAATAAAGATTCTTCTTCCTAGATGCTTACATTAA
CDS Sequence
- >LOC_Os10g22520.1
ATGCGCCATTTTGAGCTCCTCCTCTTCCTCCTCCTCTGCTCGCCGTGCCTCTTCTCAGTCTCCGATGGGAGGACGGTGCGGCCCGCGAAACGGGGCGCCCCGTCGCCCCCCATTCGGGCGGTGAACCTTGGAGGTTGGCTCGTCACGGAGGGCTGGATCCTTCCCTCCCTCTTCGACGACATTCCAAACAAAGACCTCCTGGATGGAACCCAGCTGCAATTCAAGTCGGTGACGCAGAACATGTACCTGTGCGCCGAGCAGGGCGGCGGCACCATCCTGGTGGCGAACCGGACGAGCGCCTCGGGGTGGGAGACCTTCAAGCTGTGGAGGATCGACGAGGACACGTTCGACCTCAGGGTGTTCGACAACCTGTTCGTCACCGTCGCCGGCGACGGGGTCACCGTCGTGGCGACGGTGGCGTCGCCGGGGCCCGGGGAGGCGTTCCAGATCGTGCGCAACGGCGACAAGACTCGCGCGCGCATCAGGGCACCCAATGGCATGTTCCTGCAGGCGAAGACAAGCGACTCAGTTACAGCAGATTATGATGGGGAGACAAATTGGGGCGACGATGACCCCTCTGTGTTTGTGGTCACTAGGGTAGGCGGTCTACAAGGGGAGTACCAAATATGCAATGGATATGGTAAAGCAAAGGCCACACAAGTGCTCAGGGAACACTGGCGCACATACATAGTTGAGAGCGACTTCAAGTTCATATCAACAAGTGGGCTAAACGCAGTGAGAATTCCAGTTGGATGGTGGATTGCTAGCGACCCCAATCCTCCTGCTCCTTTCGTTGGAGGATCCCTCCAAGCCTTGGATAATGCATTCAAATGGGCAGAGAAGTATAATTTGGGAGTCATTGTGGACCTGCACGCTGCACCTGGGTCGCAGAACCCGTTTGAGCACAGTGCCTCCAGAGATGGTTCACAGGACTGGGGCACCACGGATGCCAACATCGCCCAAACTGTCCAAGTCATCGATTTCCTCACACACAGATACGCGAGTAGCCCCAGCCTCCTGGCCGTGGAGCTCCTGAACGAGCCACTGGCACCCGGGGTGACTCTCCCGGCTCTCATGAGATACTACAAGGACGGCTACAACGCCGTCCGCAAGTACACCTCGACGGCGTACGTGGTCATGTCCAACCGCCTCTCCGCCAGCAACACGGAGCTCCTCGGCTTCGCCGCCGGCTTCCCCGGCGCCGTCCTCGACGTCCACTACTACAACCTCTTCACCAGCAGCTTCAACGGCCTCACCGTCGACCAGAACATCGACTACGTCAGGACCAACCGCTCCGACGAACTCAGCACCGTCACAAGGCCGAATGGGCCGCTGACGTTCGTGGGAGAGTGGGTGGCTGAGTGGAATGTGCAGGGAGCATCTAACCAGGATTATCAGAGGTTTGCACAAGCCCAGCTAGATGTTTATGGACGAGCTACCTTCGGATGGGCCTATTGGACTTACAAGAACGTCAACAACCACTGGAGCATGCAGTGGAATATCCAGAATGGGATCATCTCTCTCAAAAGCTAG
Protein Sequence
- >LOC_Os10g22520.1
MRHFELLLFLLLCSPCLFSVSDGRTVRPAKRGAPSPPIRAVNLGGWLVTEGWILPSLFDDIPNKDLLDGTQLQFKSVTQNMYLCAEQGGGTILVANRTSASGWETFKLWRIDEDTFDLRVFDNLFVTVAGDGVTVVATVASPGPGEAFQIVRNGDKTRARIRAPNGMFLQAKTSDSVTADYDGETNWGDDDPSVFVVTRVGGLQGEYQICNGYGKAKATQVLREHWRTYIVESDFKFISTSGLNAVRIPVGWWIASDPNPPAPFVGGSLQALDNAFKWAEKYNLGVIVDLHAAPGSQNPFEHSASRDGSQDWGTTDANIAQTVQVIDFLTHRYASSPSLLAVELLNEPLAPGVTLPALMRYYKDGYNAVRKYTSTAYVVMSNRLSASNTELLGFAAGFPGAVLDVHYYNLFTSSFNGLTVDQNIDYVRTNRSDELSTVTRPNGPLTFVGEWVAEWNVQGASNQDYQRFAQAQLDVYGRATFGWAYWTYKNVNNHWSMQWNIQNGIISLKS*