Information report for OsSNDP1
Gene Details
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Functional Descriptions
- By performing complementation assays with Atsfh1 mutants, we demonstrated that OsSNDP1 is involved in growth of root hairs.
- Cryo-scanning electron microscopy was utilized to further characterize the effect of the OsSNDP1 mutation on root hair morphology.
- OsSNDP1, a Sec14-nodulin domain-containing protein, plays a critical role in root hair elongation in rice.
Literature and News
Gene Resources
- UniProt: Q0IZ83
- EMBL: AP008216
- AlphaFoldDB: Q0IZ83
- EnsemblPlants: Os10t0122600-01
- Gramene: Os10t0122600-01
- KEGG: dosa:Os10g0122600, osa:4348005
- InterPro: IPR001251, IPR011074, IPR036273
- PANTHER: PTHR45657, PTHR45657:SF1
- SUPFAM: SSF46938, SSF52087
- PROSITE: PS50191
- Gene3D: 1.10.8.20, 3.40.525.10
- OrthoDB: Q0IZ83
- Conserved Domain Database: cd00170
Homologs
- Cucumis melo: MELO3C013689.2
- Fragaria vesca: mrna15187.1-v1.0-hybrid
- Hordeum vulgare: HORVU1Hr1G091860
- Medicago truncatula: Medtr6g034285
- Musa acuminata: Ma05_g31520
- Zea mays: Zm00001d025176
Sequences
cDNA Sequence
- >LOC_Os10g03400.2
ATGACAGAAGTCCTGTCGAGACCGCTCGAACACCGTCTAAGCTCTGCAACCTTAGACGGTCACTATGAAGAGAAGAGGAAATCCAATGTTGAATACTCAGAGGATGAGAAGAAAGCCAAAATCATGTCACTGAAGAAGAAGGCAATGAGTTCTTCACAAAAATTAAGGCATTCAATGAAGAAGGGGAGGAGGAGTAGCAAGGTCATGTCCATCTCAATTGCCGATGAACGTGATCCTGAAGAGGTGCAGGCTGTAGATGCCTTCCGTCAGCTCCTTATACTTGAAGAGTTGCTACCATCTCAGCATGATGATTACCACATGATGCTAAGGTTTTTGAAGGCAAGAAAGTTTGATGTTGAGAAGGCAAAGCAAATGTGGGCTGACATGTTGCGGTGGAGAAAGGAATTTGGTGCAGATACCATTCTTGAGGATTTTGAATTTGAAGAAGCTGGCAAGGTGGCAGAATGCTATCCTCAAGGTTATCATGGGGTTGATAAGGAAGGAAGGCCTGTCTACATTGAACGACTTGGACAGATCGATGTCAATAGGCTAATGCAGGTCACCACAATGGATCGTTTTATCAAGAACCATGTTAGGGAGTTTGAGAAGAACTTTGCTGTTAAGTTCCCAGCTTGCTCAATTGCTACCAAGTGCCACATTGATCAGAGCACAACAATTCTTGATGTGCAAGGGGTGGGGATGAAACAATTCAGCAAAGCTGCAAGAGACCTTATTGGTCAGCTTCAAAAGATTGATGGTGATAACTACCCTGAGACACTGTGTCGAATGTTCATCATTAATGCTGGGCCGGGATTCCGACTTCTTTGGAGCACAGTGAAGAGTTTCCTTGACCCAAAGACCACAGCAAAGATTCATGTGTTGGGCAACAAGTACCAGAGCAAGCTTCTTGAGGTGATTGATGCTAGTGAGCTGCCGGAGTTTTTTGGTGGAACTTGCCAATGTGAAGGTGGTTGTATGAAGGCTGACAAGGGCCCCTGGAAGGATGATGAAGTCATGAAGATGGTTCAAAGCGGGGTTGGGTGGTGTGGAAATCTCAATTTGAATCATCTAGAGGCTGAGGAGAAAATGATGATTTGTGAAGATGACACCATGTACACCAAGAAGCAGGAGTCTTTCAAAGATGAAGGGCGCACTTTGTCAAGAAAAATATCTCGTGCCCGAATTGAACATCCTACACTGTCGCCTGTTTGTGAGGAACTTCCTCCTATGATGCTTCCTACCCCAGGATCACCTTATTCTTGTGATGTTCCAATGGTAGAGAAGGCCATAGATGCCATTTGCCAGAGTAAGGGATCACGAGATGAGAATGTCGCAATAACCAAAGCCATTGTAAATGCCTCTAACGGATCCAACCCTCCACTCTTTGGGGGTGTCATGGCTCTTGTCATGAGCATTGCAACAATGCTCCGTGTTAGCCGCAACATGCCAAAGAAGGTACTTGGTGCTACCCTTGGGGCACAAAGTACATCCAAAATCCAAGCACAACAGCTATCCAAGATATCAATGGAGGCTGTGTCAGCAGCTGAATATGCTTCTTCTACAAAGCGCCTATCTGATATCGAGGAGAAGGTCATTGCGATTCTCACCAAGCCTGCAGAAATGCCAGCTGATAAGGAGGAGATGCTAAAGACTGCCGTCAGCCGTGTTAGTGCATTGGAGGAGGAGCTTGCCGCGACCAAGAAGGCCTTGCAGGAGACTCTTGAGCGACAAGAGGAGATCATGGCATACATTGAGAAGAAAAAGAAGAAGAAAAGCAAGCGTTTGTTTCGTTGGTAATATGCAAAGAACAAATGCCATGGGTTTGATGAAGAGGTGATGTTTTCATCGTTGGCAAAGGACGATTCCAAGTGTAACACATAATGTTCATTTATTCTTTCTCCTATGTTGCTACAATTGATTGATCTGAGCTTCTTGGCCTTAATATAAATTTTTGCACAGTGTGGGTGCGGTGATGCCAATTTGCTTTTTGATGTTGTCATA
CDS Sequence
- >LOC_Os10g03400.2
ATGACAGAAGTCCTGTCGAGACCGCTCGAACACCGTCTAAGCTCTGCAACCTTAGACGGTCACTATGAAGAGAAGAGGAAATCCAATGTTGAATACTCAGAGGATGAGAAGAAAGCCAAAATCATGTCACTGAAGAAGAAGGCAATGAGTTCTTCACAAAAATTAAGGCATTCAATGAAGAAGGGGAGGAGGAGTAGCAAGGTCATGTCCATCTCAATTGCCGATGAACGTGATCCTGAAGAGGTGCAGGCTGTAGATGCCTTCCGTCAGCTCCTTATACTTGAAGAGTTGCTACCATCTCAGCATGATGATTACCACATGATGCTAAGGTTTTTGAAGGCAAGAAAGTTTGATGTTGAGAAGGCAAAGCAAATGTGGGCTGACATGTTGCGGTGGAGAAAGGAATTTGGTGCAGATACCATTCTTGAGGATTTTGAATTTGAAGAAGCTGGCAAGGTGGCAGAATGCTATCCTCAAGGTTATCATGGGGTTGATAAGGAAGGAAGGCCTGTCTACATTGAACGACTTGGACAGATCGATGTCAATAGGCTAATGCAGGTCACCACAATGGATCGTTTTATCAAGAACCATGTTAGGGAGTTTGAGAAGAACTTTGCTGTTAAGTTCCCAGCTTGCTCAATTGCTACCAAGTGCCACATTGATCAGAGCACAACAATTCTTGATGTGCAAGGGGTGGGGATGAAACAATTCAGCAAAGCTGCAAGAGACCTTATTGGTCAGCTTCAAAAGATTGATGGTGATAACTACCCTGAGACACTGTGTCGAATGTTCATCATTAATGCTGGGCCGGGATTCCGACTTCTTTGGAGCACAGTGAAGAGTTTCCTTGACCCAAAGACCACAGCAAAGATTCATGTGTTGGGCAACAAGTACCAGAGCAAGCTTCTTGAGGTGATTGATGCTAGTGAGCTGCCGGAGTTTTTTGGTGGAACTTGCCAATGTGAAGGTGGTTGTATGAAGGCTGACAAGGGCCCCTGGAAGGATGATGAAGTCATGAAGATGGTTCAAAGCGGGGTTGGGTGGTGTGGAAATCTCAATTTGAATCATCTAGAGGCTGAGGAGAAAATGATGATTTGTGAAGATGACACCATGTACACCAAGAAGCAGGAGTCTTTCAAAGATGAAGGGCGCACTTTGTCAAGAAAAATATCTCGTGCCCGAATTGAACATCCTACACTGTCGCCTGTTTGTGAGGAACTTCCTCCTATGATGCTTCCTACCCCAGGATCACCTTATTCTTGTGATGTTCCAATGGTAGAGAAGGCCATAGATGCCATTTGCCAGAGTAAGGGATCACGAGATGAGAATGTCGCAATAACCAAAGCCATTGTAAATGCCTCTAACGGATCCAACCCTCCACTCTTTGGGGGTGTCATGGCTCTTGTCATGAGCATTGCAACAATGCTCCGTGTTAGCCGCAACATGCCAAAGAAGGTACTTGGTGCTACCCTTGGGGCACAAAGTACATCCAAAATCCAAGCACAACAGCTATCCAAGATATCAATGGAGGCTGTGTCAGCAGCTGAATATGCTTCTTCTACAAAGCGCCTATCTGATATCGAGGAGAAGGTCATTGCGATTCTCACCAAGCCTGCAGAAATGCCAGCTGATAAGGAGGAGATGCTAAAGACTGCCGTCAGCCGTGTTAGTGCATTGGAGGAGGAGCTTGCCGCGACCAAGAAGGCCTTGCAGGAGACTCTTGAGCGACAAGAGGAGATCATGGCATACATTGAGAAGAAAAAGAAGAAGAAAAGCAAGCGTTTGTTTCGTTGGTAA
Protein Sequence
- >LOC_Os10g03400.2
MTEVLSRPLEHRLSSATLDGHYEEKRKSNVEYSEDEKKAKIMSLKKKAMSSSQKLRHSMKKGRRSSKVMSISIADERDPEEVQAVDAFRQLLILEELLPSQHDDYHMMLRFLKARKFDVEKAKQMWADMLRWRKEFGADTILEDFEFEEAGKVAECYPQGYHGVDKEGRPVYIERLGQIDVNRLMQVTTMDRFIKNHVREFEKNFAVKFPACSIATKCHIDQSTTILDVQGVGMKQFSKAARDLIGQLQKIDGDNYPETLCRMFIINAGPGFRLLWSTVKSFLDPKTTAKIHVLGNKYQSKLLEVIDASELPEFFGGTCQCEGGCMKADKGPWKDDEVMKMVQSGVGWCGNLNLNHLEAEEKMMICEDDTMYTKKQESFKDEGRTLSRKISRARIEHPTLSPVCEELPPMMLPTPGSPYSCDVPMVEKAIDAICQSKGSRDENVAITKAIVNASNGSNPPLFGGVMALVMSIATMLRVSRNMPKKVLGATLGAQSTSKIQAQQLSKISMEAVSAAEYASSTKRLSDIEEKVIAILTKPAEMPADKEEMLKTAVSRVSALEEELAATKKALQETLERQEEIMAYIEKKKKKKSKRLFRW*