Gene Details:
- MSU gene ID: LOC_Os10g01570
- RAPdb gene ID: Os10g0104900
- Gene Symbol: OsCMT3a
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- To understand the role of non-CG methylation in the suppression of TEs and in plant development, we characterized rice mutants of the chromomethylase gene, OsCMT3a.
Function-related keywords:
Literature:
- Loss of function mutations in the rice chromomethylase OsCMT3a cause a burst of transposition . DOI: 10.1111/tpj.12952 ; PMID: 26243209
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os10g01570.1
GGGTGATGTTGATGTCATTTGTGGTGGGCCACCATGCCAAGGAATAAGTGGTTTCAATCGGTTCAGAAACCGCAAAGAGCCACTAAAAGACGAGAAAAACAAACAGATGGTGACATTCATGGATATTGTGGCATACCTGAAGCCTAAGTATGTCCTGATGGAAAATGTTGTAGACATACTGAAGTTTGCAGATGGTTACCTTGGACGTTATGCCTTGAGCCGTCTGGTGGCTATGAAGTACCAAGCACGACTTGGAATGATGGTTGCAGGTTGTTATGGCTTGCCACAATTTAGGATGCGTGTGTTCCTCTGGGGAGCTCTTCCTACCATGGTGCTGCCAAAGTATCCGCTTCCCACTCATAATGTTGTTGTCCGTGGTGGTGCCCCAAATGCTTTTTCTCAAAGTATTGTTGCATACGATGAAACACAGAAGCCAACATTGAAAAATGCACTGCTGCTTGGCGATGCAATTTCGGATTTGCCAGAGGTAAACAACCATCAGCCTAATGAAGTGATGGAATATGGTTCTTCCCCCAAAACAGAATTCCAGCGCTATATCCGGCTTAGCCGTAAAGAAATGCTGGATAGTTCTTTTGAAGGGAAGGATGGTCCAGATCTAGGCAAGCTTTTGGATCACCAGCCCTTAAAGCTAAATAAGGATGACCATGAGCGTGTGCAGCAAATTCCAGTAAAGAAGGGAGCCAACTTCCGGGACCTGAAGGGTGTCAGGGTTGGGGCAAACAACATCGTGGAGTGGGATCCAGACGTTCCCCGTGTATATTTATCTTCTGGCAAGCCTTTGGTTCCTGACTACGCGATGTCTTTCATCAAAGGGAGATCACTGAAGCCATTTGGGCGCTTGTGGTGGGATGAGACGGTTCCTACAGTTGTGACCCGAGCAGAGCCACACAACCAGATTATATTGCATCCGAATCAGGCGAGAGTTCTGACCGTAAGGGAGAATGCAAGGTTGCAGGGGTTCCCAGACTACTACAAGATGTTTGGCCCTATCAAAGAGAAGTATATACAAGTTGGCAATGCAGTTGCTGTACCTGTTGCTCGTGCATTGGGTTACTCCCTTGGGCTTGCATACCAGCGTGAGTCGGAGGGGAGCAGCCCTCTGTTCGTCCTGCCAGACAGCTTCACGGAAGTCGGGCGACAGGCGGCGCCGGCAAGAGCATCCTCTGTTGGTATCCCTGTTGGCGAGGTTGTTGAGCAATAGAACACTTGGGTAGAGTAGAGTCATTATTTGGTTCGATTCGAACCGATCCGGGAGAATGTTGTTTAAAATCACTGATCAGCCACCTTGGTGCTGTCATGTGATCACCATCAATGTTATTATTGATTGATTGAATGTTGTAAGGCTGGTGGCACTCCTGCTTGAGTGCTTGTTGTACTTGTAGCATAAGGTCCAAAACATTCATTCATATCCTTCTATGGGCTATCTTATGTCTGTATCCTGATAGATTGTTTGTGTTCAATCATCATCTCACATTGTATAGGCTGCCCCTGATATCATTGTTGCATCAACCTTGTGCTTTTTTGGGGCTTATTTGTTAGTCCCTCAATCTGAACTAGTAAAGTTGAAGTTTGGATGTTG
CDS Sequence
- >LOC_Os10g01570.1
ATGGTGACATTCATGGATATTGTGGCATACCTGAAGCCTAAGTATGTCCTGATGGAAAATGTTGTAGACATACTGAAGTTTGCAGATGGTTACCTTGGACGTTATGCCTTGAGCCGTCTGGTGGCTATGAAGTACCAAGCACGACTTGGAATGATGGTTGCAGGTTGTTATGGCTTGCCACAATTTAGGATGCGTGTGTTCCTCTGGGGAGCTCTTCCTACCATGGTGCTGCCAAAGTATCCGCTTCCCACTCATAATGTTGTTGTCCGTGGTGGTGCCCCAAATGCTTTTTCTCAAAGTATTGTTGCATACGATGAAACACAGAAGCCAACATTGAAAAATGCACTGCTGCTTGGCGATGCAATTTCGGATTTGCCAGAGGTAAACAACCATCAGCCTAATGAAGTGATGGAATATGGTTCTTCCCCCAAAACAGAATTCCAGCGCTATATCCGGCTTAGCCGTAAAGAAATGCTGGATAGTTCTTTTGAAGGGAAGGATGGTCCAGATCTAGGCAAGCTTTTGGATCACCAGCCCTTAAAGCTAAATAAGGATGACCATGAGCGTGTGCAGCAAATTCCAGTAAAGAAGGGAGCCAACTTCCGGGACCTGAAGGGTGTCAGGGTTGGGGCAAACAACATCGTGGAGTGGGATCCAGACGTTCCCCGTGTATATTTATCTTCTGGCAAGCCTTTGGTTCCTGACTACGCGATGTCTTTCATCAAAGGGAGATCACTGAAGCCATTTGGGCGCTTGTGGTGGGATGAGACGGTTCCTACAGTTGTGACCCGAGCAGAGCCACACAACCAGATTATATTGCATCCGAATCAGGCGAGAGTTCTGACCGTAAGGGAGAATGCAAGGTTGCAGGGGTTCCCAGACTACTACAAGATGTTTGGCCCTATCAAAGAGAAGTATATACAAGTTGGCAATGCAGTTGCTGTACCTGTTGCTCGTGCATTGGGTTACTCCCTTGGGCTTGCATACCAGCGTGAGTCGGAGGGGAGCAGCCCTCTGTTCGTCCTGCCAGACAGCTTCACGGAAGTCGGGCGACAGGCGGCGCCGGCAAGAGCATCCTCTGTTGGTATCCCTGTTGGCGAGGTTGTTGAGCAATAG
Protein Sequence
- >LOC_Os10g01570.1
MVTFMDIVAYLKPKYVLMENVVDILKFADGYLGRYALSRLVAMKYQARLGMMVAGCYGLPQFRMRVFLWGALPTMVLPKYPLPTHNVVVRGGAPNAFSQSIVAYDETQKPTLKNALLLGDAISDLPEVNNHQPNEVMEYGSSPKTEFQRYIRLSRKEMLDSSFEGKDGPDLGKLLDHQPLKLNKDDHERVQQIPVKKGANFRDLKGVRVGANNIVEWDPDVPRVYLSSGKPLVPDYAMSFIKGRSLKPFGRLWWDETVPTVVTRAEPHNQIILHPNQARVLTVRENARLQGFPDYYKMFGPIKEKYIQVGNAVAVPVARALGYSLGLAYQRESEGSSPLFVLPDSFTEVGRQAAPARASSVGIPVGEVVEQ*