Gene Details:
- MSU gene ID: LOC_Os09g35980
- RAPdb gene ID: Os09g0529300
- Gene Symbol: TAC1
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- OsPIN2-over-expressing plants had suppressed the expression of a gravitropism-related gene OsLazy1 in the shoots, but unaltered expression of OsPIN1b and OsTAC1, which were reported as tiller angle controllers in rice.
- TAC1 was mapped to a 35-kb region on chromosome 9 using a large F(2) population from crosses between an indica rice, IR24, which displays a relatively spread-out plant architecture, and an introgressed line, IL55, derived from japonica rice Asominori, which displays a compact plant architecture with extremely erect tillers.
- The data suggest that OsPIN2 has a distinct auxin-dependent regulation pathway together with OsPIN1b and OsTAC1 controlling rice shoot architecture.
- Our previous work identified Tiller Angle Control 1 (TAC1) as a major quantitative trait locus that controls rice tiller angle.
- 5-kb intron from ‘AGGA’ to ‘GGGA’ decreases the level of TAC1, resulting in a compact plant architecture with a tiller angle close to zero.
- 00112, respectively, further indicate that TAC1 has been highly conserved during the course of rice domestication.
- A phylogenetic tree derived from TAC1 sequence analysis suggests that the indica and japonica subspecies arose independently during the domestication of wild rice.
- This research demonstrates that tiller angle is controlled by a major quantitative trait locus, TAC1 (Tiller Angle Control 1).
- TAC1, a major quantitative trait locus controlling tiller angle in rice.
- Our results reveal that TAC1 is necessary for the dynamic changes in plant architecture, which can guide improvements in plant architecture during the modern super rice breeding.
- Moreover, TAC1 positively regulates loose plant architecture, and high TAC1 expression cannot influence the expression of tested tiller-angle-related genes.
Function-related keywords:
- tiller , erect , shoot , architecture , tiller-angle , shoot-architecture , auxin , domestication , breeding , plant-architecture
Literature:
- Molecular evolution of the TAC1 gene from rice (Oryza sativa L.) . DOI: 10.1016/j.jgg.2012.07.011 ; PMID: 23089365
- TAC1, a major quantitative trait locus controlling tiller angle in rice . DOI: 10.1111/j.1365-313X.2007.03284.x ; PMID: 17908158
- Over-expression of OsPIN2 leads to increased tiller numbers, angle and shorter plant height through suppression of OsLAZY1 . DOI: 10.1111/j.1467-7652.2011.00637.x ; PMID: 21777365
- Tiller Angle Control 1 Is Essential for the Dynamic Changes in Plant Architecture in Rice . DOI: 10.3390/ijms23094997 ; PMID: 35563391
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os09g35980.1
TACTGTCTGGCTTTCTCTTCTGGTTTCATATTGGTTCTAGAGAGATGGCTCTAAAGGTGTTCAATTGGCTGAATCGGAAGAAGCATTCTAATGTCGAGTATTGCACCATCAATGAGAACAAGGGTAAGGATACCAGGATATCTCTCTTTTATGTACCACATGTTTTGTTGTTCTCATGTTGTCAACTCTTGTTTCTTCTCTTCTATTTTTTTTCCTGATGGAGTAGCCATGGAAGAGAAGGAAGACTCTCTGCGTGCAAGTGTGACTGAGCAAGACACTGAGGCCCTGCTGCTCCGTGATGTGCTTATTAATGGTATACTTGCAATTGGCACGCTGGGCCACAATGTAAACTCACTCTGTCCTGAGTCCTGTATTGAACAAGATGAGCCCATCATCATGTGTGATGAGAAAGTGGAACAAGAGAAGTGCGAAGAAGAAAAGGCTGAGGCTAAACAGGACACACCAGTTACAGCACCAAGTGAACCGGCATCTGCTCTTGAGCCTGCCAAGATGCACTCATCATCGATGAAAGAAGACAACTTCATGTGCTTTGTGAAGGAGGAAATCCTAATGCATGGCATGGAAGTGGAAGATGTTCCTAACATCCAGGAACGACCACTTCTGATGTTAGAGAAGGTGGAGAAAGTGAGAACTACACTTGCCGATCTATTTGCTGCAGAAGCATTCTCATCAAGTGATGCAGAGGATAAGTGTTACCCGAAAATCGTCATTGTTGCTGGGGCATCCACTTCAAAGCCTACGTCGTGCATGGAGAAGATGCATCACAAGAAGCCAACAAAACCAACGTCAAAGCCGCTGAAGGCTACAAGAAAATTAAGTCGAGTATGGTTTTCTTCGTCTCTGCTTTATTTGTTAAGCCTTGTTACATTATATTTTACTAGTCTGGAATTTATTACACTTTGTTCCATGGTCAGTGCGCCACATCTTACACATATGTTTTACCATATAGCTACAACTGGAGTAAGCATTATGCATCTAGCCAGTCTTTAGTGGTAAATGATCACTGACCTGGAATGCACCTTTTTGGTTTTTGTCATCTGTAAAATAAGTAGGTCATGAGGAAGATGTTGGGGAAGAAGATCCACCCAGAGCAGCTCAATGGACGTAGCAATGCAGAGGGCCCTGTCACTGCATAATGCTAGGTTTGTGGACAAAAGTTTCCTTTCTCTATCTGGCAATTTATTACCTAGAGTTTTTTTAAAGCTGTCTGTTGAACTATACAGGGCTCAAGGCCCTTGTGTTTTGCATACGATTTTGTACCTTTCCAAATTTTCTTGATTTTTACTTGGATTCCATTGTTTGTAATAAAATTAGGTTAATATCTGAGGTAGTATTTGCATAGAATGGATACCTTCTACCAAAGTTATATTTGTTTGTGGGTCCTAGAGCTAGCATGACCCACGAATCACATTCAAGAATATAGTAATTCGTTTAGGCTACATTTCACTAGGAATAGAACATATGAATATTCTCAGGTTTAATAAGGCAGATGCAAAAAAGAACTGAATAGCACAGGAAAGTAATTTTTCCATTTCAAGCTTCTCACAGTCAAAAACAAGTAATGGTTCAAAAATTGAATATTCTATCACCTGTTGCCTCCATTTATGTGGAACTCACAAGAGGGTCTAAGTGCTGCTTGACACTCTGACCTGTATTTAAATAAAATGTTATCACCTATTGCCTCTGCTTATTATTGGGATCTCAAAACACAATCTATTACTGTGTATGCCTTGGCATTTTTTAAAATCTGAGCTGCCCCCTTATTCTTCACATTTTCTCAGAAAACCATATAAACTTTTAGATAAATGAAGCTTTTATTGATCTCAGACAATTACATCAAGTTGATAGAACCAAACTAAGAACACTTCTGGCCTCTGATAATGGAACTGCTGTTTGTTTAAGTAGAAAGAATGGTGTGTGTATTTTAACGGTTGGTGATTGGGAATTGGGATGCAGTGACCATGGAGACTGTGTTCTTCAGAATATTTTTAAGAAATAGTGTTTTCGGTGGATCCTATCATGGAACTGCCTATGGTGGAAAGAGCAATACGAGTTGAAACATATAGGGATTAGGAAGCATGGGTTCGGACTAAAATGCATTCGTTCCTGCCATGATGCAAAGCTTCATTCGAAGCAAAATGAGCACATGCCATGGTACAGTGGCGTGCAACGAGCACTGCAATTGCACACGACGTGCATGTTCTGAAAAAGGCCAGTGGACACTAGACATGCAGCTAATCCTCTTTTGATGAATTCTATCATGAAACCAATGGATTCGTTGAAAATCTGAACAAATTGATGGATTTGGTCCCAGCTGTAGAAAGGTTGGCAAACTCTTCTCGCTCCTGTATTATTGTAGGCTGGAGCTATGATGGACCAAATCATCAGAAGCAAATTTCACCATATATAAGCATCTACTTTTATCTTTTTCTCTATTTTAAAATGTGATCATAGTGAAGTTATATACATTCTATCTGCTTAACGCTCCACATTATCCAAAAAAATGCATCACACTCCATATTGGGAACACGTTGGTGGTTCTGAACCAAAGTCGATCTCTTGATGCCAATTTTTTTTTTGAGCTGGTTGAGTAGTCGAACTGGGAACAATTACTGCTTGAGGCTACAAAATTTCTGGCCGACAATACGTCTTGATCAGGAACTGACTAAAGAAATTCCCTTTCACCTTTTGCGGGATTTGTTGGATCCATCCTCACGCTTCGGATTCCTTGCTCAAGAGAAACATCCATGCATATCGTCGACAGCGTTCGTTCAGTCCTCTTCCTTTTGTTGTTGGTGCTGTTGTTATTATTGTTATTGTTATTGCTGCCTATTCGCTCGCCAGTGATGAAGAATAGTCCTGCCTATATTTGCCTGTAGTACATTGTAAAGCTACAGTTGACGTGTCTTGTAAGACCCTTATTATTATTGTCCATACCACGACGTCTC - >LOC_Os09g35980.2
TACTGTCTGGCTTTCTCTTCTGGTTTCATATTGGTTCTAGAGAGATGGCTCTAAAGGTGTTCAATTGGCTGAATCGGAAGAAGCATTCTAATGTCGAGTATTGCACCATCAATGAGAACAAGGGTAAGGATACCAGGATATCTCTCTTTTATGTACCACATGTTTTGTTGTTCTCATGTTGTCAACTCTTGTTTCTTCTCTTCTATTTTTTTTCCTGATGGAGTAGCCATGGAAGAGAAGGAAGACTCTCTGCGTGCAAGTGTGACTGAGCAAGACACTGAGGCCCTGCTGCTCCGTGATGTGCTTATTAATGGTATACTTGCAATTGGCACGCTGGGCCACAATGTAAACTCACTCTGTCCTGAGTCCTGTATTGAACAAGATGAGCCCATCATCATGTGTGATGAGAAAGTGGAACAAGAGAAGTGCGAAGAAGAAAAGGCTGAGGCTAAACAGGACACACCAGTTACAGCACCAAGTGAACCGGCATCTGCTCTTGAGCCTGCCAAGATGCACTCATCATCGATGAAAGAAGACAACTTCATGTGCTTTGTGAAGGAGGAAATCCTAATGCATGGCATGGAAGTGGAAGATGTTCCTAACATCCAGGAACGACCACTTCTGATGTTAGAGAAGGTGGAGAAAGTGAGAACTACACTTGCCGATCTATTTGCTGCAGAAGCATTCTCATCAAGTGATGCAGAGGATAAGTGTTACCCGAAAATCGTCATTGTTGCTGGGGCATCCACTTCAAAGCCTACGTCGTGCATGGAGAAGATGCATCACAAGAAGCCAACAAAACCAACGTCAAAGCCGCTGAAGGCTACAAGAAAATTAAGTCGAGTATGGTTTTCTTCGTCTCTGCTTTATTTGTTAAGCCTTGTTACATTATATTTTACTAGTCTGGAATTTATTACACTTTGTTCCATGGTCAGTGCGCCACATCTTACACATATGTTTTACCATATAGCTACAACTGGAGTAAGCATTATGCATCTAGCCAGTCTTTAGTGGTAAATGATCACTGACCTGGAATGCACCTTTTTGGTTTTTGTCATCTGTAAAATAAGTAGGTCATGAGGAAGATGTTGGGGAAGAAGATCCACCCAGAGCAGCTCAATGGACGTAGCAATGCAGAGGGCCCTGTCACTGCATAATGCTAGGTTTGTGGACAAAAGTTTCCTTTCTCTATCTGGCAATTTATTACCTAGAGTTTTTTTAAAGCTGTCTGTTGAACTATACAGGGCTCAAGGCCCTTGTGTTTTGCATACGATTTTGTACCTTTCCAAATTTTCTTGATTTTTACTTGGATTCCATTGTTTGTAATAAAATTAGGTTAATATCTGAGGTAGTATTTGCATAGAATGGATACCTTCTACCAAAGTTATATTTGTTTGTGGGTCCTAGAGCTAGCATGACCCACGAATCACATTCAAGAATATAGTAATTCGTTTAGGCTACATTTCACTAGGAATAGAACATATGAATATTCTCAGGTTTAATAAGGCAGATGCAAAAAAGAACTGAATAGCACAGGAAAGTAATTTTTCCATTTCAAGCTTCTCACAGTCAAAAACAAGTAATGGTTCAAAAATTGAATATTCTATCACCTGTTGCCTCCATTTATGTGGAACTCACAAGAGGGTCTAAGTGCTGCTTGACACTCTGACCTGTATTTAAATAAAATGTTATCACCTATTGCCTCTGCTTATTATTGGGATCTCAAAACACAATCTATTACTGTGTATGCCTTGGCATTTTTTAAAATCTGAGCTGCCCCCTTATTCTTCACATTTTCTCAGAAAACCATATAAACTTTTAGATAAATGAAGCTTTTATTGATCTCAGACAATTACATCAAGTTGATAGAACCAAACTAAGAACACTTCTGGCCTCTGATAATGGAACTGCTGTTTGTTTAAGTAGAAAGAATGGTGTGTGTATTTTAACGGTTGGTGATTGGGAATTGGGATGCAGTGACCATGGAGACTGTGTTCTTCAGAATATTTTTAAGAAATAGTGTTTTCGGTGGATCCTATCATGGAACTGCCTATGGTGGAAAGAGCAATACGAGTTGAAACATATAGGGATTAGGAAGCATGGGTTCGGACTAAAATGCATTCGTTCCTGCCATGATGCAAAGCTTCATTCGAAGCAAAATGAGCACATGCCATGGTACAGTGGCGTGCAACGAGCACTGCAATTGCACACGACGTGCATGTTCTGAAAAAGGCCAGTGGACACTAGACATGCAGCTAATCCTCTTTTGATGAATTCTATCATGAAACCAATGGATTCGTTGAAAATCTGAACAAATTGATGGATTTGGTCCCAGCTGTAGAAAGGTTGGCAAACTCTTCTCGCTCCTGTATTATTGTAGGCTGGAGCTATGATGGACCAAATCATCAGAAGCAAATTTCACCATATATAAGCATCTACTTTTATCTTTTTCTCTATTTTAAAATGTGATCATAGTGAAGTTATATACATTCTATCTGCTTAACGCTCCACATTATCCAAAAAAATGCATCACACTCCATATTGGGAACACGTTGGTGGTTCTGAACCAAAGTCGATCTCTTGATGCCAATTTTTTTTTTGAGCTGGTTGAGTAGTCGAACTGGGAACAATTACTGCTTGAGGCTACAAAATTTCTGGCCGACAATACGTCTTGATCAGGAACTGACTAAAGAAATTCCCTTTCACCTTTTGCGGGATTTGTTGGATCCATCCTCACGCTTCGGATTCCTTGCTCAAGAGAAACATCCATGCATATCGTCGACAGCGTTCGTTCAGTCCTCTTCCTTTTGTTGTTGGTGCTGTTGTTATTATTGTTATTGTTATTGCTGCCTATTCGCTCGCCAGTGATGAAGAATAGTCCTGCCTATATTTGCCTGTAGTACATTGTAAAGCTACAGTTGACGTGTCTTGTAAGACCCTTATTATTATTGTCCATACCACGACGTCTC
CDS Sequence
- >LOC_Os09g35980.1
ATGTCGAGTATTGCACCATCAATGAGAACAAGGGTAAGGATACCAGGATATCTCTCTTTTATGTACCACATGTTTTGTTGTTCTCATGTTGTCAACTCTTGTTTCTTCTCTTCTATTTTTTTTCCTGATGGAGTAGCCATGGAAGAGAAGGAAGACTCTCTGCGTGCAAGTGTGACTGAGCAAGACACTGAGGCCCTGCTGCTCCGTGATGTGCTTATTAATGGTATACTTGCAATTGGCACGCTGGGCCACAATGTAAACTCACTCTGTCCTGAGTCCTGTATTGAACAAGATGAGCCCATCATCATGTGTGATGAGAAAGTGGAACAAGAGAAGTGCGAAGAAGAAAAGGCTGAGGCTAAACAGGACACACCAGTTACAGCACCAAGTGAACCGGCATCTGCTCTTGAGCCTGCCAAGATGCACTCATCATCGATGAAAGAAGACAACTTCATGTGCTTTGTGAAGGAGGAAATCCTAATGCATGGCATGGAAGTGGAAGATGTTCCTAACATCCAGGAACGACCACTTCTGATGTTAGAGAAGGTGGAGAAAGTGAGAACTACACTTGCCGATCTATTTGCTGCAGAAGCATTCTCATCAAGTGATGCAGAGGATAAGTGTTACCCGAAAATCGTCATTGTTGCTGGGGCATCCACTTCAAAGCCTACGTCGTGCATGGAGAAGATGCATCACAAGAAGCCAACAAAACCAACGTCAAAGCCGCTGAAGGCTACAAGAAAATTAAGTCGAGTATGGTTTTCTTCGTCTCTGCTTTATTTGTTAAGCCTTGTTACATTATATTTTACTAGTCTGGAATTTATTACACTTTGTTCCATGGTCAGTGCGCCACATCTTACACATATGTTTTACCATATAGCTACAACTGGAGTAAGCATTATGCATCTAGCCAGTCTTTAG - >LOC_Os09g35980.2
ATGTCGAGTATTGCACCATCAATGAGAACAAGGGTAAGGATACCAGGATATCTCTCTTTTATGTACCACATGTTTTGTTGTTCTCATGTTGTCAACTCTTGTTTCTTCTCTTCTATTTTTTTTCCTGATGGAGTAGCCATGGAAGAGAAGGAAGACTCTCTGCGTGCAAGTGTGACTGAGCAAGACACTGAGGCCCTGCTGCTCCGTGATGTGCTTATTAATGGTATACTTGCAATTGGCACGCTGGGCCACAATGTAAACTCACTCTGTCCTGAGTCCTGTATTGAACAAGATGAGCCCATCATCATGTGTGATGAGAAAGTGGAACAAGAGAAGTGCGAAGAAGAAAAGGCTGAGGCTAAACAGGACACACCAGTTACAGCACCAAGTGAACCGGCATCTGCTCTTGAGCCTGCCAAGATGCACTCATCATCGATGAAAGAAGACAACTTCATGTGCTTTGTGAAGGAGGAAATCCTAATGCATGGCATGGAAGTGGAAGATGTTCCTAACATCCAGGAACGACCACTTCTGATGTTAGAGAAGGTGGAGAAAGTGAGAACTACACTTGCCGATCTATTTGCTGCAGAAGCATTCTCATCAAGTGATGCAGAGGATAAGTGTTACCCGAAAATCGTCATTGTTGCTGGGGCATCCACTTCAAAGCCTACGTCGTGCATGGAGAAGATGCATCACAAGAAGCCAACAAAACCAACGTCAAAGCCGCTGAAGGCTACAAGAAAATTAAGTCGAGTATGGTTTTCTTCGTCTCTGCTTTATTTGTTAAGCCTTGTTACATTATATTTTACTAGTCTGGAATTTATTACACTTTGTTCCATGGTCAGTGCGCCACATCTTACACATATGTTTTACCATATAGCTACAACTGGAGTAAGCATTATGCATCTAGCCAGTCTTTAG
Protein Sequence
- >LOC_Os09g35980.1
MSSIAPSMRTRVRIPGYLSFMYHMFCCSHVVNSCFFSSIFFPDGVAMEEKEDSLRASVTEQDTEALLLRDVLINGILAIGTLGHNVNSLCPESCIEQDEPIIMCDEKVEQEKCEEEKAEAKQDTPVTAPSEPASALEPAKMHSSSMKEDNFMCFVKEEILMHGMEVEDVPNIQERPLLMLEKVEKVRTTLADLFAAEAFSSSDAEDKCYPKIVIVAGASTSKPTSCMEKMHHKKPTKPTSKPLKATRKLSRVWFSSSLLYLLSLVTLYFTSLEFITLCSMVSAPHLTHMFYHIATTGVSIMHLASL* - >LOC_Os09g35980.2
MSSIAPSMRTRVRIPGYLSFMYHMFCCSHVVNSCFFSSIFFPDGVAMEEKEDSLRASVTEQDTEALLLRDVLINGILAIGTLGHNVNSLCPESCIEQDEPIIMCDEKVEQEKCEEEKAEAKQDTPVTAPSEPASALEPAKMHSSSMKEDNFMCFVKEEILMHGMEVEDVPNIQERPLLMLEKVEKVRTTLADLFAAEAFSSSDAEDKCYPKIVIVAGASTSKPTSCMEKMHHKKPTKPTSKPLKATRKLSRVWFSSSLLYLLSLVTLYFTSLEFITLCSMVSAPHLTHMFYHIATTGVSIMHLASL*