Gene Details:

Functional Descriptions:

  • OsPIN2-over-expressing plants had suppressed the expression of a gravitropism-related gene OsLazy1 in the shoots, but unaltered expression of OsPIN1b and OsTAC1, which were reported as tiller angle controllers in rice.
  • TAC1 was mapped to a 35-kb region on chromosome 9 using a large F(2) population from crosses between an indica rice, IR24, which displays a relatively spread-out plant architecture, and an introgressed line, IL55, derived from japonica rice Asominori, which displays a compact plant architecture with extremely erect tillers.
  • The data suggest that OsPIN2 has a distinct auxin-dependent regulation pathway together with OsPIN1b and OsTAC1 controlling rice shoot architecture.
  • Our previous work identified Tiller Angle Control 1 (TAC1) as a major quantitative trait locus that controls rice tiller angle.
  • 5-kb intron from ‘AGGA’ to ‘GGGA’ decreases the level of TAC1, resulting in a compact plant architecture with a tiller angle close to zero.
  • 00112, respectively, further indicate that TAC1 has been highly conserved during the course of rice domestication.
  • A phylogenetic tree derived from TAC1 sequence analysis suggests that the indica and japonica subspecies arose independently during the domestication of wild rice.
  • This research demonstrates that tiller angle is controlled by a major quantitative trait locus, TAC1 (Tiller Angle Control 1).
  • TAC1, a major quantitative trait locus controlling tiller angle in rice.
  • Our results reveal that TAC1 is necessary for the dynamic changes in plant architecture, which can guide improvements in plant architecture during the modern super rice breeding.
  • Moreover, TAC1 positively regulates loose plant architecture, and high TAC1 expression cannot influence the expression of tested tiller-angle-related genes.

Literature:

Gene Resources:

  • NCBI ID:
  • UniProt accessions:

Sequences:

cDNA Sequence
  • >LOC_Os09g35980.1
    TACTGTCTGGCTTTCTCTTCTGGTTTCATATTGGTTCTAGAGAGATGGCTCTAAAGGTGTTCAATTGGCTGAATCGGAAGAAGCATTCTAATGTCGAGTATTGCACCATCAATGAGAACAAGGGTAAGGATACCAGGATATCTCTCTTTTATGTACCACATGTTTTGTTGTTCTCATGTTGTCAACTCTTGTTTCTTCTCTTCTATTTTTTTTCCTGATGGAGTAGCCATGGAAGAGAAGGAAGACTCTCTGCGTGCAAGTGTGACTGAGCAAGACACTGAGGCCCTGCTGCTCCGTGATGTGCTTATTAATGGTATACTTGCAATTGGCACGCTGGGCCACAATGTAAACTCACTCTGTCCTGAGTCCTGTATTGAACAAGATGAGCCCATCATCATGTGTGATGAGAAAGTGGAACAAGAGAAGTGCGAAGAAGAAAAGGCTGAGGCTAAACAGGACACACCAGTTACAGCACCAAGTGAACCGGCATCTGCTCTTGAGCCTGCCAAGATGCACTCATCATCGATGAAAGAAGACAACTTCATGTGCTTTGTGAAGGAGGAAATCCTAATGCATGGCATGGAAGTGGAAGATGTTCCTAACATCCAGGAACGACCACTTCTGATGTTAGAGAAGGTGGAGAAAGTGAGAACTACACTTGCCGATCTATTTGCTGCAGAAGCATTCTCATCAAGTGATGCAGAGGATAAGTGTTACCCGAAAATCGTCATTGTTGCTGGGGCATCCACTTCAAAGCCTACGTCGTGCATGGAGAAGATGCATCACAAGAAGCCAACAAAACCAACGTCAAAGCCGCTGAAGGCTACAAGAAAATTAAGTCGAGTATGGTTTTCTTCGTCTCTGCTTTATTTGTTAAGCCTTGTTACATTATATTTTACTAGTCTGGAATTTATTACACTTTGTTCCATGGTCAGTGCGCCACATCTTACACATATGTTTTACCATATAGCTACAACTGGAGTAAGCATTATGCATCTAGCCAGTCTTTAGTGGTAAATGATCACTGACCTGGAATGCACCTTTTTGGTTTTTGTCATCTGTAAAATAAGTAGGTCATGAGGAAGATGTTGGGGAAGAAGATCCACCCAGAGCAGCTCAATGGACGTAGCAATGCAGAGGGCCCTGTCACTGCATAATGCTAGGTTTGTGGACAAAAGTTTCCTTTCTCTATCTGGCAATTTATTACCTAGAGTTTTTTTAAAGCTGTCTGTTGAACTATACAGGGCTCAAGGCCCTTGTGTTTTGCATACGATTTTGTACCTTTCCAAATTTTCTTGATTTTTACTTGGATTCCATTGTTTGTAATAAAATTAGGTTAATATCTGAGGTAGTATTTGCATAGAATGGATACCTTCTACCAAAGTTATATTTGTTTGTGGGTCCTAGAGCTAGCATGACCCACGAATCACATTCAAGAATATAGTAATTCGTTTAGGCTACATTTCACTAGGAATAGAACATATGAATATTCTCAGGTTTAATAAGGCAGATGCAAAAAAGAACTGAATAGCACAGGAAAGTAATTTTTCCATTTCAAGCTTCTCACAGTCAAAAACAAGTAATGGTTCAAAAATTGAATATTCTATCACCTGTTGCCTCCATTTATGTGGAACTCACAAGAGGGTCTAAGTGCTGCTTGACACTCTGACCTGTATTTAAATAAAATGTTATCACCTATTGCCTCTGCTTATTATTGGGATCTCAAAACACAATCTATTACTGTGTATGCCTTGGCATTTTTTAAAATCTGAGCTGCCCCCTTATTCTTCACATTTTCTCAGAAAACCATATAAACTTTTAGATAAATGAAGCTTTTATTGATCTCAGACAATTACATCAAGTTGATAGAACCAAACTAAGAACACTTCTGGCCTCTGATAATGGAACTGCTGTTTGTTTAAGTAGAAAGAATGGTGTGTGTATTTTAACGGTTGGTGATTGGGAATTGGGATGCAGTGACCATGGAGACTGTGTTCTTCAGAATATTTTTAAGAAATAGTGTTTTCGGTGGATCCTATCATGGAACTGCCTATGGTGGAAAGAGCAATACGAGTTGAAACATATAGGGATTAGGAAGCATGGGTTCGGACTAAAATGCATTCGTTCCTGCCATGATGCAAAGCTTCATTCGAAGCAAAATGAGCACATGCCATGGTACAGTGGCGTGCAACGAGCACTGCAATTGCACACGACGTGCATGTTCTGAAAAAGGCCAGTGGACACTAGACATGCAGCTAATCCTCTTTTGATGAATTCTATCATGAAACCAATGGATTCGTTGAAAATCTGAACAAATTGATGGATTTGGTCCCAGCTGTAGAAAGGTTGGCAAACTCTTCTCGCTCCTGTATTATTGTAGGCTGGAGCTATGATGGACCAAATCATCAGAAGCAAATTTCACCATATATAAGCATCTACTTTTATCTTTTTCTCTATTTTAAAATGTGATCATAGTGAAGTTATATACATTCTATCTGCTTAACGCTCCACATTATCCAAAAAAATGCATCACACTCCATATTGGGAACACGTTGGTGGTTCTGAACCAAAGTCGATCTCTTGATGCCAATTTTTTTTTTGAGCTGGTTGAGTAGTCGAACTGGGAACAATTACTGCTTGAGGCTACAAAATTTCTGGCCGACAATACGTCTTGATCAGGAACTGACTAAAGAAATTCCCTTTCACCTTTTGCGGGATTTGTTGGATCCATCCTCACGCTTCGGATTCCTTGCTCAAGAGAAACATCCATGCATATCGTCGACAGCGTTCGTTCAGTCCTCTTCCTTTTGTTGTTGGTGCTGTTGTTATTATTGTTATTGTTATTGCTGCCTATTCGCTCGCCAGTGATGAAGAATAGTCCTGCCTATATTTGCCTGTAGTACATTGTAAAGCTACAGTTGACGTGTCTTGTAAGACCCTTATTATTATTGTCCATACCACGACGTCTC
  • >LOC_Os09g35980.2
    TACTGTCTGGCTTTCTCTTCTGGTTTCATATTGGTTCTAGAGAGATGGCTCTAAAGGTGTTCAATTGGCTGAATCGGAAGAAGCATTCTAATGTCGAGTATTGCACCATCAATGAGAACAAGGGTAAGGATACCAGGATATCTCTCTTTTATGTACCACATGTTTTGTTGTTCTCATGTTGTCAACTCTTGTTTCTTCTCTTCTATTTTTTTTCCTGATGGAGTAGCCATGGAAGAGAAGGAAGACTCTCTGCGTGCAAGTGTGACTGAGCAAGACACTGAGGCCCTGCTGCTCCGTGATGTGCTTATTAATGGTATACTTGCAATTGGCACGCTGGGCCACAATGTAAACTCACTCTGTCCTGAGTCCTGTATTGAACAAGATGAGCCCATCATCATGTGTGATGAGAAAGTGGAACAAGAGAAGTGCGAAGAAGAAAAGGCTGAGGCTAAACAGGACACACCAGTTACAGCACCAAGTGAACCGGCATCTGCTCTTGAGCCTGCCAAGATGCACTCATCATCGATGAAAGAAGACAACTTCATGTGCTTTGTGAAGGAGGAAATCCTAATGCATGGCATGGAAGTGGAAGATGTTCCTAACATCCAGGAACGACCACTTCTGATGTTAGAGAAGGTGGAGAAAGTGAGAACTACACTTGCCGATCTATTTGCTGCAGAAGCATTCTCATCAAGTGATGCAGAGGATAAGTGTTACCCGAAAATCGTCATTGTTGCTGGGGCATCCACTTCAAAGCCTACGTCGTGCATGGAGAAGATGCATCACAAGAAGCCAACAAAACCAACGTCAAAGCCGCTGAAGGCTACAAGAAAATTAAGTCGAGTATGGTTTTCTTCGTCTCTGCTTTATTTGTTAAGCCTTGTTACATTATATTTTACTAGTCTGGAATTTATTACACTTTGTTCCATGGTCAGTGCGCCACATCTTACACATATGTTTTACCATATAGCTACAACTGGAGTAAGCATTATGCATCTAGCCAGTCTTTAGTGGTAAATGATCACTGACCTGGAATGCACCTTTTTGGTTTTTGTCATCTGTAAAATAAGTAGGTCATGAGGAAGATGTTGGGGAAGAAGATCCACCCAGAGCAGCTCAATGGACGTAGCAATGCAGAGGGCCCTGTCACTGCATAATGCTAGGTTTGTGGACAAAAGTTTCCTTTCTCTATCTGGCAATTTATTACCTAGAGTTTTTTTAAAGCTGTCTGTTGAACTATACAGGGCTCAAGGCCCTTGTGTTTTGCATACGATTTTGTACCTTTCCAAATTTTCTTGATTTTTACTTGGATTCCATTGTTTGTAATAAAATTAGGTTAATATCTGAGGTAGTATTTGCATAGAATGGATACCTTCTACCAAAGTTATATTTGTTTGTGGGTCCTAGAGCTAGCATGACCCACGAATCACATTCAAGAATATAGTAATTCGTTTAGGCTACATTTCACTAGGAATAGAACATATGAATATTCTCAGGTTTAATAAGGCAGATGCAAAAAAGAACTGAATAGCACAGGAAAGTAATTTTTCCATTTCAAGCTTCTCACAGTCAAAAACAAGTAATGGTTCAAAAATTGAATATTCTATCACCTGTTGCCTCCATTTATGTGGAACTCACAAGAGGGTCTAAGTGCTGCTTGACACTCTGACCTGTATTTAAATAAAATGTTATCACCTATTGCCTCTGCTTATTATTGGGATCTCAAAACACAATCTATTACTGTGTATGCCTTGGCATTTTTTAAAATCTGAGCTGCCCCCTTATTCTTCACATTTTCTCAGAAAACCATATAAACTTTTAGATAAATGAAGCTTTTATTGATCTCAGACAATTACATCAAGTTGATAGAACCAAACTAAGAACACTTCTGGCCTCTGATAATGGAACTGCTGTTTGTTTAAGTAGAAAGAATGGTGTGTGTATTTTAACGGTTGGTGATTGGGAATTGGGATGCAGTGACCATGGAGACTGTGTTCTTCAGAATATTTTTAAGAAATAGTGTTTTCGGTGGATCCTATCATGGAACTGCCTATGGTGGAAAGAGCAATACGAGTTGAAACATATAGGGATTAGGAAGCATGGGTTCGGACTAAAATGCATTCGTTCCTGCCATGATGCAAAGCTTCATTCGAAGCAAAATGAGCACATGCCATGGTACAGTGGCGTGCAACGAGCACTGCAATTGCACACGACGTGCATGTTCTGAAAAAGGCCAGTGGACACTAGACATGCAGCTAATCCTCTTTTGATGAATTCTATCATGAAACCAATGGATTCGTTGAAAATCTGAACAAATTGATGGATTTGGTCCCAGCTGTAGAAAGGTTGGCAAACTCTTCTCGCTCCTGTATTATTGTAGGCTGGAGCTATGATGGACCAAATCATCAGAAGCAAATTTCACCATATATAAGCATCTACTTTTATCTTTTTCTCTATTTTAAAATGTGATCATAGTGAAGTTATATACATTCTATCTGCTTAACGCTCCACATTATCCAAAAAAATGCATCACACTCCATATTGGGAACACGTTGGTGGTTCTGAACCAAAGTCGATCTCTTGATGCCAATTTTTTTTTTGAGCTGGTTGAGTAGTCGAACTGGGAACAATTACTGCTTGAGGCTACAAAATTTCTGGCCGACAATACGTCTTGATCAGGAACTGACTAAAGAAATTCCCTTTCACCTTTTGCGGGATTTGTTGGATCCATCCTCACGCTTCGGATTCCTTGCTCAAGAGAAACATCCATGCATATCGTCGACAGCGTTCGTTCAGTCCTCTTCCTTTTGTTGTTGGTGCTGTTGTTATTATTGTTATTGTTATTGCTGCCTATTCGCTCGCCAGTGATGAAGAATAGTCCTGCCTATATTTGCCTGTAGTACATTGTAAAGCTACAGTTGACGTGTCTTGTAAGACCCTTATTATTATTGTCCATACCACGACGTCTC
CDS Sequence
  • >LOC_Os09g35980.1
    ATGTCGAGTATTGCACCATCAATGAGAACAAGGGTAAGGATACCAGGATATCTCTCTTTTATGTACCACATGTTTTGTTGTTCTCATGTTGTCAACTCTTGTTTCTTCTCTTCTATTTTTTTTCCTGATGGAGTAGCCATGGAAGAGAAGGAAGACTCTCTGCGTGCAAGTGTGACTGAGCAAGACACTGAGGCCCTGCTGCTCCGTGATGTGCTTATTAATGGTATACTTGCAATTGGCACGCTGGGCCACAATGTAAACTCACTCTGTCCTGAGTCCTGTATTGAACAAGATGAGCCCATCATCATGTGTGATGAGAAAGTGGAACAAGAGAAGTGCGAAGAAGAAAAGGCTGAGGCTAAACAGGACACACCAGTTACAGCACCAAGTGAACCGGCATCTGCTCTTGAGCCTGCCAAGATGCACTCATCATCGATGAAAGAAGACAACTTCATGTGCTTTGTGAAGGAGGAAATCCTAATGCATGGCATGGAAGTGGAAGATGTTCCTAACATCCAGGAACGACCACTTCTGATGTTAGAGAAGGTGGAGAAAGTGAGAACTACACTTGCCGATCTATTTGCTGCAGAAGCATTCTCATCAAGTGATGCAGAGGATAAGTGTTACCCGAAAATCGTCATTGTTGCTGGGGCATCCACTTCAAAGCCTACGTCGTGCATGGAGAAGATGCATCACAAGAAGCCAACAAAACCAACGTCAAAGCCGCTGAAGGCTACAAGAAAATTAAGTCGAGTATGGTTTTCTTCGTCTCTGCTTTATTTGTTAAGCCTTGTTACATTATATTTTACTAGTCTGGAATTTATTACACTTTGTTCCATGGTCAGTGCGCCACATCTTACACATATGTTTTACCATATAGCTACAACTGGAGTAAGCATTATGCATCTAGCCAGTCTTTAG
  • >LOC_Os09g35980.2
    ATGTCGAGTATTGCACCATCAATGAGAACAAGGGTAAGGATACCAGGATATCTCTCTTTTATGTACCACATGTTTTGTTGTTCTCATGTTGTCAACTCTTGTTTCTTCTCTTCTATTTTTTTTCCTGATGGAGTAGCCATGGAAGAGAAGGAAGACTCTCTGCGTGCAAGTGTGACTGAGCAAGACACTGAGGCCCTGCTGCTCCGTGATGTGCTTATTAATGGTATACTTGCAATTGGCACGCTGGGCCACAATGTAAACTCACTCTGTCCTGAGTCCTGTATTGAACAAGATGAGCCCATCATCATGTGTGATGAGAAAGTGGAACAAGAGAAGTGCGAAGAAGAAAAGGCTGAGGCTAAACAGGACACACCAGTTACAGCACCAAGTGAACCGGCATCTGCTCTTGAGCCTGCCAAGATGCACTCATCATCGATGAAAGAAGACAACTTCATGTGCTTTGTGAAGGAGGAAATCCTAATGCATGGCATGGAAGTGGAAGATGTTCCTAACATCCAGGAACGACCACTTCTGATGTTAGAGAAGGTGGAGAAAGTGAGAACTACACTTGCCGATCTATTTGCTGCAGAAGCATTCTCATCAAGTGATGCAGAGGATAAGTGTTACCCGAAAATCGTCATTGTTGCTGGGGCATCCACTTCAAAGCCTACGTCGTGCATGGAGAAGATGCATCACAAGAAGCCAACAAAACCAACGTCAAAGCCGCTGAAGGCTACAAGAAAATTAAGTCGAGTATGGTTTTCTTCGTCTCTGCTTTATTTGTTAAGCCTTGTTACATTATATTTTACTAGTCTGGAATTTATTACACTTTGTTCCATGGTCAGTGCGCCACATCTTACACATATGTTTTACCATATAGCTACAACTGGAGTAAGCATTATGCATCTAGCCAGTCTTTAG
Protein Sequence
  • >LOC_Os09g35980.1
    MSSIAPSMRTRVRIPGYLSFMYHMFCCSHVVNSCFFSSIFFPDGVAMEEKEDSLRASVTEQDTEALLLRDVLINGILAIGTLGHNVNSLCPESCIEQDEPIIMCDEKVEQEKCEEEKAEAKQDTPVTAPSEPASALEPAKMHSSSMKEDNFMCFVKEEILMHGMEVEDVPNIQERPLLMLEKVEKVRTTLADLFAAEAFSSSDAEDKCYPKIVIVAGASTSKPTSCMEKMHHKKPTKPTSKPLKATRKLSRVWFSSSLLYLLSLVTLYFTSLEFITLCSMVSAPHLTHMFYHIATTGVSIMHLASL*
  • >LOC_Os09g35980.2
    MSSIAPSMRTRVRIPGYLSFMYHMFCCSHVVNSCFFSSIFFPDGVAMEEKEDSLRASVTEQDTEALLLRDVLINGILAIGTLGHNVNSLCPESCIEQDEPIIMCDEKVEQEKCEEEKAEAKQDTPVTAPSEPASALEPAKMHSSSMKEDNFMCFVKEEILMHGMEVEDVPNIQERPLLMLEKVEKVRTTLADLFAAEAFSSSDAEDKCYPKIVIVAGASTSKPTSCMEKMHHKKPTKPTSKPLKATRKLSRVWFSSSLLYLLSLVTLYFTSLEFITLCSMVSAPHLTHMFYHIATTGVSIMHLASL*