Gene Details:

Functional Descriptions:

  • The LGD1 mutant showed slow growth, reduced tiller number and plant height, altered panicle architecture and reduced grain yield.
  • Our results demonstrated that LGD1 pleiotropically regulated rice vegetative growth and development through both the distinct spatiotemporal expression patterns of its multiple transcripts and RNA binding activity.
  • In this study, T-DNA mutant and RNAi transgenic approaches were used to functionally characterize a unique rice gene, LAGGING GROWTH AND DEVELOPMENT 1 (LGD1).
  • Rice LGD1 containing RNA binding activity affects growth and development through alternative promoters.
  • The fewer unelongated internodes and cells in LGD1 led to respective reductions in tiller number and to semi-dwarfism.

Literature:

Gene Resources:

Sequences:

cDNA Sequence
  • >LOC_Os09g32540.1
    ATGGAGGGGGAGGAGGGGAGGAAGGGGAAGGAGGCACTGAGCGGGGGGCACCTCTGCCACGTGTGCGGGTACCAGTACCCCAACGCGAACCCTAGCGCGAAGCTCCGCCGCTCCCACCGGAAGAACTGCGGGAAGGCGCCGGCCGCGGACGAGCGGGAGGAGGGGGAGGAGGTGGACGCCGACATGGAGCGCAATGCGGGGGAGGGGCTCCTGCCAGTTAGAGCAGGAGGAGGTGAGTCGGAGGGGAATGCAGGCTCTCCATCGCTCGGATCTGCGAGAGGAGATGCTGATTTGGTGGAGGTGAAGGAGATTGCAGAGAGGCTGAAAAAGGCAAAAAGTATGGCTGCCTTTTGCTCATCAGTCCCCCCCTTGGAGAGGGACAGGAAACTCACATGGCATAGTGAGATGGTACTGTTCTGGGGTACTGGAGTAAAGTCTTTTGTATCCTTCCATGCTTTTATTGGAAACACCTTTAATGAACATGCTTCTCCAAACGTTACCGGAGTTCAAGTCATCACTGGTTACTGCAGTGAAGCTGGTGTGATTAATTGCGCAAGTCATTCTGATGAAATTTCAAAAGAAGTTGGACGTCCGGCTGAACGAGAAGATAGTCTTGATGAGTACCAGGACGCGTCTCCTTTTCTTCATCAACCAGATTCTGAAGTTGGTGCAGCAGTAGCACATAAGTCAGATTTTTCTATTGAAGAAATTAAGAATTTGGATAGTGTTTCACCAGCAGCAAGTGTAGCAGCAAATGAAATTTCTGTGGAAATGGATGGAGTATCGAAAGATCAGTTATCAGGACAACCCAATATGACTAATTTATCTGGTGAATCCATAGTTGGAAAAGAAGTTGAGCCTACTGTGATGCTTGAGAGTTCAGATGAATTCTCAGTTAATGTTCACAGTGATAATACATATATTGTTGACAGCAAACCTGATAAGACATCTGAGTTTATTGGTGATGTGAATGGTTCAACTTCATTTATTTCTGACCTAACATCCCAATCTACAAGTCCCATAATGGTTGAAAGCTTGATGGAAGATAGCATGGATGCTCTGCACATCATATCTGAAGTATCACCAAGTTTGGAAGAAAAAGCAGGATCAGCCAATGCTGAATCTGTAACAGAAAATTCCAGAATTGACTTTGTGCAAACTGAAGATCAACTGAAGCTCACCAATGCTGTAAATACCTTGACAGATTGCTCTTCACAGTACAAGTGTGTTAAAGATACTTTAGATGCCCAGCTGCCTGTTGAGAATCCGTTCCTGGGTAATTCAGTATGTTCTTTAGATGGTCATCAGAGTGACCATGTTGTTACTAATATGGATAGCATGTGGGGTTCTGATGATGAAGATATTTGTAGTGAAGGCATCAAAGCGAAGGGCAGTGAGTTGGGTTTTTCTTGTGAGGAGAACCCACAACATGTCGAGTTGGTTGATAAAGCAGATGAAAATCCTTCTGTAGAGAAGCCTAATGGATTATCAGAAGAGGTGGTCTGCAGCAAAGAGATTGGCCCTGAGGTTCCTATTATAGGCCAGGTCTCTGCAAGTCAGCATGTTGCCTTACTAATGGATCAAGTGTCCACAAAGAATCCGTTCATTCTAGATGATACCAGGAGCGACGACTTATTTGAGCTTCCAACTGAGAATTACCATTCGGAAGCACAAAATGTTGCTGAATCAAAGCTGCAAGTTGACTTTACACCTCTGCCATTGGATCAGCTGATAATTGTGGACCAAACTAGCATTGCTGAAGGCCAGCAATTTGTCATCTCAGGTGATCGTGTACCAGCTATCTCAAGTACCTGTGGAAATGAACCTGCAGTTGGCACAGAGGATGTGTCTGTCAGTAGCACTTCTGATCCTGCGAAGAACATTTCCTTGCATGATGCCTCAGTGAACAATAGCAGACAGGAAGACGGGGAGCCTACAAGTGGCATCAATTTTGTGCCATCTGAAGTATTTCTTCCAGCAGAGTTTAGCACAATGCCTACTTCTCAGGATATCAATGCTCTCAAGAATGATGGTAACGAGAAGACGCCACTTGAAGACATAAGCACCAAGGATATGACTGCATCACTTAGTGAAGATAATGTTGAAGAAAAGAAAGAGACCGAAGGCACTAGTGTGAAGGAGATGAATTCAATACTGAAAGCAGACAATGTTGAAGAAGAGAAGTTGACTGATGACACGAGTGCAGAGAGGAATGCAATGCAGCACATAGATGACGCTGAAAAGAAGCAGGCTGCTGACACTGTTTCGAGGGAAACGAGTGCTCTACAAAACATAGAAGAAAGGGAAAACGTTGAAGGTACTGGTGCTAAGGGAGTGCCAGCAGTAGGGAGCTTGGAAAATGCTGATGCGGAGAATCAGACTGAAGACACCAGTGCAAAGACAGAATGTAAATCAGATAATGCTGACAACAAGAAGCAGAGTTACGACACAAGCACAGAGGAGATGAATGCCAAGAATCAAGCTCAAGATACTTCCTCAAAGGAGATGAACACCATACAAAACACATCTAATGCTGAAGAAAAGAACCAAACTGAAGACCCAGCTGTCCAGGAGGGAAACAAGCAGAAGGAAGGCATCTCTCCCACAGTAGCGAAGCAGAGTTCAGAAAGAGTTCATGTCCCTCTCAAGGTGCTCCTAGCCGAGGCGAGTGTGGAGACGAAAGAAAAGAAAACCACTGCCAAGGAGCGTGTTTTGTCATTCAGGCGCCGAGTATCGAAGGACGACTCATCGTCGGCCAAGTCCGGGTCCCCAAAACCTGGTGCTGATGACAACAAATTCTGGAGCTCCCCAGCAAGATTGCCCGAGAACAATGCTGAGAAGAAATCCAAAGCAAGGAAGCAGCCATGGATGCCGTTCATTTGCTGTCACTCGGTGCACTAAGCCTGCCATCCATCTTCAGCAGCACAAAGCTTCTCCAAGCTGCTGCTATACACCATGTGCATGTTGCATCTTGAGTTATTATTGATAGCACTAGTAGTAGTAACAGTAGTAAAGGGCTTGGCTATGCTACGATGCTCTTTCTAGTATTTGCATTGGTCTACATTTGCCGCTGTAACTAAAGCTCCCCACATCTTTTGTGTAGATAGTCCATGCAAGTAAGATTGTTTGGTAATGTCGAGCTGATACTTGCTGATCTGCATTGATGTTCAGACTTTGTGAATCATGTGCGATTTTGATGTTCATAGTAAACTTGCTCGTGAATGG
CDS Sequence
  • >LOC_Os09g32540.1
    ATGGAGGGGGAGGAGGGGAGGAAGGGGAAGGAGGCACTGAGCGGGGGGCACCTCTGCCACGTGTGCGGGTACCAGTACCCCAACGCGAACCCTAGCGCGAAGCTCCGCCGCTCCCACCGGAAGAACTGCGGGAAGGCGCCGGCCGCGGACGAGCGGGAGGAGGGGGAGGAGGTGGACGCCGACATGGAGCGCAATGCGGGGGAGGGGCTCCTGCCAGTTAGAGCAGGAGGAGGTGAGTCGGAGGGGAATGCAGGCTCTCCATCGCTCGGATCTGCGAGAGGAGATGCTGATTTGGTGGAGGTGAAGGAGATTGCAGAGAGGCTGAAAAAGGCAAAAAGTATGGCTGCCTTTTGCTCATCAGTCCCCCCCTTGGAGAGGGACAGGAAACTCACATGGCATAGTGAGATGGTACTGTTCTGGGGTACTGGAGTAAAGTCTTTTGTATCCTTCCATGCTTTTATTGGAAACACCTTTAATGAACATGCTTCTCCAAACGTTACCGGAGTTCAAGTCATCACTGGTTACTGCAGTGAAGCTGGTGTGATTAATTGCGCAAGTCATTCTGATGAAATTTCAAAAGAAGTTGGACGTCCGGCTGAACGAGAAGATAGTCTTGATGAGTACCAGGACGCGTCTCCTTTTCTTCATCAACCAGATTCTGAAGTTGGTGCAGCAGTAGCACATAAGTCAGATTTTTCTATTGAAGAAATTAAGAATTTGGATAGTGTTTCACCAGCAGCAAGTGTAGCAGCAAATGAAATTTCTGTGGAAATGGATGGAGTATCGAAAGATCAGTTATCAGGACAACCCAATATGACTAATTTATCTGGTGAATCCATAGTTGGAAAAGAAGTTGAGCCTACTGTGATGCTTGAGAGTTCAGATGAATTCTCAGTTAATGTTCACAGTGATAATACATATATTGTTGACAGCAAACCTGATAAGACATCTGAGTTTATTGGTGATGTGAATGGTTCAACTTCATTTATTTCTGACCTAACATCCCAATCTACAAGTCCCATAATGGTTGAAAGCTTGATGGAAGATAGCATGGATGCTCTGCACATCATATCTGAAGTATCACCAAGTTTGGAAGAAAAAGCAGGATCAGCCAATGCTGAATCTGTAACAGAAAATTCCAGAATTGACTTTGTGCAAACTGAAGATCAACTGAAGCTCACCAATGCTGTAAATACCTTGACAGATTGCTCTTCACAGTACAAGTGTGTTAAAGATACTTTAGATGCCCAGCTGCCTGTTGAGAATCCGTTCCTGGGTAATTCAGTATGTTCTTTAGATGGTCATCAGAGTGACCATGTTGTTACTAATATGGATAGCATGTGGGGTTCTGATGATGAAGATATTTGTAGTGAAGGCATCAAAGCGAAGGGCAGTGAGTTGGGTTTTTCTTGTGAGGAGAACCCACAACATGTCGAGTTGGTTGATAAAGCAGATGAAAATCCTTCTGTAGAGAAGCCTAATGGATTATCAGAAGAGGTGGTCTGCAGCAAAGAGATTGGCCCTGAGGTTCCTATTATAGGCCAGGTCTCTGCAAGTCAGCATGTTGCCTTACTAATGGATCAAGTGTCCACAAAGAATCCGTTCATTCTAGATGATACCAGGAGCGACGACTTATTTGAGCTTCCAACTGAGAATTACCATTCGGAAGCACAAAATGTTGCTGAATCAAAGCTGCAAGTTGACTTTACACCTCTGCCATTGGATCAGCTGATAATTGTGGACCAAACTAGCATTGCTGAAGGCCAGCAATTTGTCATCTCAGGTGATCGTGTACCAGCTATCTCAAGTACCTGTGGAAATGAACCTGCAGTTGGCACAGAGGATGTGTCTGTCAGTAGCACTTCTGATCCTGCGAAGAACATTTCCTTGCATGATGCCTCAGTGAACAATAGCAGACAGGAAGACGGGGAGCCTACAAGTGGCATCAATTTTGTGCCATCTGAAGTATTTCTTCCAGCAGAGTTTAGCACAATGCCTACTTCTCAGGATATCAATGCTCTCAAGAATGATGGTAACGAGAAGACGCCACTTGAAGACATAAGCACCAAGGATATGACTGCATCACTTAGTGAAGATAATGTTGAAGAAAAGAAAGAGACCGAAGGCACTAGTGTGAAGGAGATGAATTCAATACTGAAAGCAGACAATGTTGAAGAAGAGAAGTTGACTGATGACACGAGTGCAGAGAGGAATGCAATGCAGCACATAGATGACGCTGAAAAGAAGCAGGCTGCTGACACTGTTTCGAGGGAAACGAGTGCTCTACAAAACATAGAAGAAAGGGAAAACGTTGAAGGTACTGGTGCTAAGGGAGTGCCAGCAGTAGGGAGCTTGGAAAATGCTGATGCGGAGAATCAGACTGAAGACACCAGTGCAAAGACAGAATGTAAATCAGATAATGCTGACAACAAGAAGCAGAGTTACGACACAAGCACAGAGGAGATGAATGCCAAGAATCAAGCTCAAGATACTTCCTCAAAGGAGATGAACACCATACAAAACACATCTAATGCTGAAGAAAAGAACCAAACTGAAGACCCAGCTGTCCAGGAGGGAAACAAGCAGAAGGAAGGCATCTCTCCCACAGTAGCGAAGCAGAGTTCAGAAAGAGTTCATGTCCCTCTCAAGGTGCTCCTAGCCGAGGCGAGTGTGGAGACGAAAGAAAAGAAAACCACTGCCAAGGAGCGTGTTTTGTCATTCAGGCGCCGAGTATCGAAGGACGACTCATCGTCGGCCAAGTCCGGGTCCCCAAAACCTGGTGCTGATGACAACAAATTCTGGAGCTCCCCAGCAAGATTGCCCGAGAACAATGCTGAGAAGAAATCCAAAGCAAGGAAGCAGCCATGGATGCCGTTCATTTGCTGTCACTCGGTGCACTAA
Protein Sequence
  • >LOC_Os09g32540.1
    MEGEEGRKGKEALSGGHLCHVCGYQYPNANPSAKLRRSHRKNCGKAPAADEREEGEEVDADMERNAGEGLLPVRAGGGESEGNAGSPSLGSARGDADLVEVKEIAERLKKAKSMAAFCSSVPPLERDRKLTWHSEMVLFWGTGVKSFVSFHAFIGNTFNEHASPNVTGVQVITGYCSEAGVINCASHSDEISKEVGRPAEREDSLDEYQDASPFLHQPDSEVGAAVAHKSDFSIEEIKNLDSVSPAASVAANEISVEMDGVSKDQLSGQPNMTNLSGESIVGKEVEPTVMLESSDEFSVNVHSDNTYIVDSKPDKTSEFIGDVNGSTSFISDLTSQSTSPIMVESLMEDSMDALHIISEVSPSLEEKAGSANAESVTENSRIDFVQTEDQLKLTNAVNTLTDCSSQYKCVKDTLDAQLPVENPFLGNSVCSLDGHQSDHVVTNMDSMWGSDDEDICSEGIKAKGSELGFSCEENPQHVELVDKADENPSVEKPNGLSEEVVCSKEIGPEVPIIGQVSASQHVALLMDQVSTKNPFILDDTRSDDLFELPTENYHSEAQNVAESKLQVDFTPLPLDQLIIVDQTSIAEGQQFVISGDRVPAISSTCGNEPAVGTEDVSVSSTSDPAKNISLHDASVNNSRQEDGEPTSGINFVPSEVFLPAEFSTMPTSQDINALKNDGNEKTPLEDISTKDMTASLSEDNVEEKKETEGTSVKEMNSILKADNVEEEKLTDDTSAERNAMQHIDDAEKKQAADTVSRETSALQNIEERENVEGTGAKGVPAVGSLENADAENQTEDTSAKTECKSDNADNKKQSYDTSTEEMNAKNQAQDTSSKEMNTIQNTSNAEEKNQTEDPAVQEGNKQKEGISPTVAKQSSERVHVPLKVLLAEASVETKEKKTTAKERVLSFRRRVSKDDSSSAKSGSPKPGADDNKFWSSPARLPENNAEKKSKARKQPWMPFICCHSVH*