Information report for LGD1
Gene Details
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Functional Descriptions
- The LGD1 mutant showed slow growth, reduced tiller number and plant height, altered panicle architecture and reduced grain yield.
- Our results demonstrated that LGD1 pleiotropically regulated rice vegetative growth and development through both the distinct spatiotemporal expression patterns of its multiple transcripts and RNA binding activity.
- In this study, T-DNA mutant and RNAi transgenic approaches were used to functionally characterize a unique rice gene, LAGGING GROWTH AND DEVELOPMENT 1 (LGD1).
- Rice LGD1 containing RNA binding activity affects growth and development through alternative promoters.
- The fewer unelongated internodes and cells in LGD1 led to respective reductions in tiller number and to semi-dwarfism.
Functional Keywords
- grain-yield , vegetative , growth , grain , architecture , panicle-architecture , height , tiller-number , yield , dwarf , tiller , panicle
Literature and News
Gene Resources
- NCBI ID: NP_001063585.2
Sequences
cDNA Sequence
- >LOC_Os09g32540.1
ATGGAGGGGGAGGAGGGGAGGAAGGGGAAGGAGGCACTGAGCGGGGGGCACCTCTGCCACGTGTGCGGGTACCAGTACCCCAACGCGAACCCTAGCGCGAAGCTCCGCCGCTCCCACCGGAAGAACTGCGGGAAGGCGCCGGCCGCGGACGAGCGGGAGGAGGGGGAGGAGGTGGACGCCGACATGGAGCGCAATGCGGGGGAGGGGCTCCTGCCAGTTAGAGCAGGAGGAGGTGAGTCGGAGGGGAATGCAGGCTCTCCATCGCTCGGATCTGCGAGAGGAGATGCTGATTTGGTGGAGGTGAAGGAGATTGCAGAGAGGCTGAAAAAGGCAAAAAGTATGGCTGCCTTTTGCTCATCAGTCCCCCCCTTGGAGAGGGACAGGAAACTCACATGGCATAGTGAGATGGTACTGTTCTGGGGTACTGGAGTAAAGTCTTTTGTATCCTTCCATGCTTTTATTGGAAACACCTTTAATGAACATGCTTCTCCAAACGTTACCGGAGTTCAAGTCATCACTGGTTACTGCAGTGAAGCTGGTGTGATTAATTGCGCAAGTCATTCTGATGAAATTTCAAAAGAAGTTGGACGTCCGGCTGAACGAGAAGATAGTCTTGATGAGTACCAGGACGCGTCTCCTTTTCTTCATCAACCAGATTCTGAAGTTGGTGCAGCAGTAGCACATAAGTCAGATTTTTCTATTGAAGAAATTAAGAATTTGGATAGTGTTTCACCAGCAGCAAGTGTAGCAGCAAATGAAATTTCTGTGGAAATGGATGGAGTATCGAAAGATCAGTTATCAGGACAACCCAATATGACTAATTTATCTGGTGAATCCATAGTTGGAAAAGAAGTTGAGCCTACTGTGATGCTTGAGAGTTCAGATGAATTCTCAGTTAATGTTCACAGTGATAATACATATATTGTTGACAGCAAACCTGATAAGACATCTGAGTTTATTGGTGATGTGAATGGTTCAACTTCATTTATTTCTGACCTAACATCCCAATCTACAAGTCCCATAATGGTTGAAAGCTTGATGGAAGATAGCATGGATGCTCTGCACATCATATCTGAAGTATCACCAAGTTTGGAAGAAAAAGCAGGATCAGCCAATGCTGAATCTGTAACAGAAAATTCCAGAATTGACTTTGTGCAAACTGAAGATCAACTGAAGCTCACCAATGCTGTAAATACCTTGACAGATTGCTCTTCACAGTACAAGTGTGTTAAAGATACTTTAGATGCCCAGCTGCCTGTTGAGAATCCGTTCCTGGGTAATTCAGTATGTTCTTTAGATGGTCATCAGAGTGACCATGTTGTTACTAATATGGATAGCATGTGGGGTTCTGATGATGAAGATATTTGTAGTGAAGGCATCAAAGCGAAGGGCAGTGAGTTGGGTTTTTCTTGTGAGGAGAACCCACAACATGTCGAGTTGGTTGATAAAGCAGATGAAAATCCTTCTGTAGAGAAGCCTAATGGATTATCAGAAGAGGTGGTCTGCAGCAAAGAGATTGGCCCTGAGGTTCCTATTATAGGCCAGGTCTCTGCAAGTCAGCATGTTGCCTTACTAATGGATCAAGTGTCCACAAAGAATCCGTTCATTCTAGATGATACCAGGAGCGACGACTTATTTGAGCTTCCAACTGAGAATTACCATTCGGAAGCACAAAATGTTGCTGAATCAAAGCTGCAAGTTGACTTTACACCTCTGCCATTGGATCAGCTGATAATTGTGGACCAAACTAGCATTGCTGAAGGCCAGCAATTTGTCATCTCAGGTGATCGTGTACCAGCTATCTCAAGTACCTGTGGAAATGAACCTGCAGTTGGCACAGAGGATGTGTCTGTCAGTAGCACTTCTGATCCTGCGAAGAACATTTCCTTGCATGATGCCTCAGTGAACAATAGCAGACAGGAAGACGGGGAGCCTACAAGTGGCATCAATTTTGTGCCATCTGAAGTATTTCTTCCAGCAGAGTTTAGCACAATGCCTACTTCTCAGGATATCAATGCTCTCAAGAATGATGGTAACGAGAAGACGCCACTTGAAGACATAAGCACCAAGGATATGACTGCATCACTTAGTGAAGATAATGTTGAAGAAAAGAAAGAGACCGAAGGCACTAGTGTGAAGGAGATGAATTCAATACTGAAAGCAGACAATGTTGAAGAAGAGAAGTTGACTGATGACACGAGTGCAGAGAGGAATGCAATGCAGCACATAGATGACGCTGAAAAGAAGCAGGCTGCTGACACTGTTTCGAGGGAAACGAGTGCTCTACAAAACATAGAAGAAAGGGAAAACGTTGAAGGTACTGGTGCTAAGGGAGTGCCAGCAGTAGGGAGCTTGGAAAATGCTGATGCGGAGAATCAGACTGAAGACACCAGTGCAAAGACAGAATGTAAATCAGATAATGCTGACAACAAGAAGCAGAGTTACGACACAAGCACAGAGGAGATGAATGCCAAGAATCAAGCTCAAGATACTTCCTCAAAGGAGATGAACACCATACAAAACACATCTAATGCTGAAGAAAAGAACCAAACTGAAGACCCAGCTGTCCAGGAGGGAAACAAGCAGAAGGAAGGCATCTCTCCCACAGTAGCGAAGCAGAGTTCAGAAAGAGTTCATGTCCCTCTCAAGGTGCTCCTAGCCGAGGCGAGTGTGGAGACGAAAGAAAAGAAAACCACTGCCAAGGAGCGTGTTTTGTCATTCAGGCGCCGAGTATCGAAGGACGACTCATCGTCGGCCAAGTCCGGGTCCCCAAAACCTGGTGCTGATGACAACAAATTCTGGAGCTCCCCAGCAAGATTGCCCGAGAACAATGCTGAGAAGAAATCCAAAGCAAGGAAGCAGCCATGGATGCCGTTCATTTGCTGTCACTCGGTGCACTAAGCCTGCCATCCATCTTCAGCAGCACAAAGCTTCTCCAAGCTGCTGCTATACACCATGTGCATGTTGCATCTTGAGTTATTATTGATAGCACTAGTAGTAGTAACAGTAGTAAAGGGCTTGGCTATGCTACGATGCTCTTTCTAGTATTTGCATTGGTCTACATTTGCCGCTGTAACTAAAGCTCCCCACATCTTTTGTGTAGATAGTCCATGCAAGTAAGATTGTTTGGTAATGTCGAGCTGATACTTGCTGATCTGCATTGATGTTCAGACTTTGTGAATCATGTGCGATTTTGATGTTCATAGTAAACTTGCTCGTGAATGG
CDS Sequence
- >LOC_Os09g32540.1
ATGGAGGGGGAGGAGGGGAGGAAGGGGAAGGAGGCACTGAGCGGGGGGCACCTCTGCCACGTGTGCGGGTACCAGTACCCCAACGCGAACCCTAGCGCGAAGCTCCGCCGCTCCCACCGGAAGAACTGCGGGAAGGCGCCGGCCGCGGACGAGCGGGAGGAGGGGGAGGAGGTGGACGCCGACATGGAGCGCAATGCGGGGGAGGGGCTCCTGCCAGTTAGAGCAGGAGGAGGTGAGTCGGAGGGGAATGCAGGCTCTCCATCGCTCGGATCTGCGAGAGGAGATGCTGATTTGGTGGAGGTGAAGGAGATTGCAGAGAGGCTGAAAAAGGCAAAAAGTATGGCTGCCTTTTGCTCATCAGTCCCCCCCTTGGAGAGGGACAGGAAACTCACATGGCATAGTGAGATGGTACTGTTCTGGGGTACTGGAGTAAAGTCTTTTGTATCCTTCCATGCTTTTATTGGAAACACCTTTAATGAACATGCTTCTCCAAACGTTACCGGAGTTCAAGTCATCACTGGTTACTGCAGTGAAGCTGGTGTGATTAATTGCGCAAGTCATTCTGATGAAATTTCAAAAGAAGTTGGACGTCCGGCTGAACGAGAAGATAGTCTTGATGAGTACCAGGACGCGTCTCCTTTTCTTCATCAACCAGATTCTGAAGTTGGTGCAGCAGTAGCACATAAGTCAGATTTTTCTATTGAAGAAATTAAGAATTTGGATAGTGTTTCACCAGCAGCAAGTGTAGCAGCAAATGAAATTTCTGTGGAAATGGATGGAGTATCGAAAGATCAGTTATCAGGACAACCCAATATGACTAATTTATCTGGTGAATCCATAGTTGGAAAAGAAGTTGAGCCTACTGTGATGCTTGAGAGTTCAGATGAATTCTCAGTTAATGTTCACAGTGATAATACATATATTGTTGACAGCAAACCTGATAAGACATCTGAGTTTATTGGTGATGTGAATGGTTCAACTTCATTTATTTCTGACCTAACATCCCAATCTACAAGTCCCATAATGGTTGAAAGCTTGATGGAAGATAGCATGGATGCTCTGCACATCATATCTGAAGTATCACCAAGTTTGGAAGAAAAAGCAGGATCAGCCAATGCTGAATCTGTAACAGAAAATTCCAGAATTGACTTTGTGCAAACTGAAGATCAACTGAAGCTCACCAATGCTGTAAATACCTTGACAGATTGCTCTTCACAGTACAAGTGTGTTAAAGATACTTTAGATGCCCAGCTGCCTGTTGAGAATCCGTTCCTGGGTAATTCAGTATGTTCTTTAGATGGTCATCAGAGTGACCATGTTGTTACTAATATGGATAGCATGTGGGGTTCTGATGATGAAGATATTTGTAGTGAAGGCATCAAAGCGAAGGGCAGTGAGTTGGGTTTTTCTTGTGAGGAGAACCCACAACATGTCGAGTTGGTTGATAAAGCAGATGAAAATCCTTCTGTAGAGAAGCCTAATGGATTATCAGAAGAGGTGGTCTGCAGCAAAGAGATTGGCCCTGAGGTTCCTATTATAGGCCAGGTCTCTGCAAGTCAGCATGTTGCCTTACTAATGGATCAAGTGTCCACAAAGAATCCGTTCATTCTAGATGATACCAGGAGCGACGACTTATTTGAGCTTCCAACTGAGAATTACCATTCGGAAGCACAAAATGTTGCTGAATCAAAGCTGCAAGTTGACTTTACACCTCTGCCATTGGATCAGCTGATAATTGTGGACCAAACTAGCATTGCTGAAGGCCAGCAATTTGTCATCTCAGGTGATCGTGTACCAGCTATCTCAAGTACCTGTGGAAATGAACCTGCAGTTGGCACAGAGGATGTGTCTGTCAGTAGCACTTCTGATCCTGCGAAGAACATTTCCTTGCATGATGCCTCAGTGAACAATAGCAGACAGGAAGACGGGGAGCCTACAAGTGGCATCAATTTTGTGCCATCTGAAGTATTTCTTCCAGCAGAGTTTAGCACAATGCCTACTTCTCAGGATATCAATGCTCTCAAGAATGATGGTAACGAGAAGACGCCACTTGAAGACATAAGCACCAAGGATATGACTGCATCACTTAGTGAAGATAATGTTGAAGAAAAGAAAGAGACCGAAGGCACTAGTGTGAAGGAGATGAATTCAATACTGAAAGCAGACAATGTTGAAGAAGAGAAGTTGACTGATGACACGAGTGCAGAGAGGAATGCAATGCAGCACATAGATGACGCTGAAAAGAAGCAGGCTGCTGACACTGTTTCGAGGGAAACGAGTGCTCTACAAAACATAGAAGAAAGGGAAAACGTTGAAGGTACTGGTGCTAAGGGAGTGCCAGCAGTAGGGAGCTTGGAAAATGCTGATGCGGAGAATCAGACTGAAGACACCAGTGCAAAGACAGAATGTAAATCAGATAATGCTGACAACAAGAAGCAGAGTTACGACACAAGCACAGAGGAGATGAATGCCAAGAATCAAGCTCAAGATACTTCCTCAAAGGAGATGAACACCATACAAAACACATCTAATGCTGAAGAAAAGAACCAAACTGAAGACCCAGCTGTCCAGGAGGGAAACAAGCAGAAGGAAGGCATCTCTCCCACAGTAGCGAAGCAGAGTTCAGAAAGAGTTCATGTCCCTCTCAAGGTGCTCCTAGCCGAGGCGAGTGTGGAGACGAAAGAAAAGAAAACCACTGCCAAGGAGCGTGTTTTGTCATTCAGGCGCCGAGTATCGAAGGACGACTCATCGTCGGCCAAGTCCGGGTCCCCAAAACCTGGTGCTGATGACAACAAATTCTGGAGCTCCCCAGCAAGATTGCCCGAGAACAATGCTGAGAAGAAATCCAAAGCAAGGAAGCAGCCATGGATGCCGTTCATTTGCTGTCACTCGGTGCACTAA
Protein Sequence
- >LOC_Os09g32540.1
MEGEEGRKGKEALSGGHLCHVCGYQYPNANPSAKLRRSHRKNCGKAPAADEREEGEEVDADMERNAGEGLLPVRAGGGESEGNAGSPSLGSARGDADLVEVKEIAERLKKAKSMAAFCSSVPPLERDRKLTWHSEMVLFWGTGVKSFVSFHAFIGNTFNEHASPNVTGVQVITGYCSEAGVINCASHSDEISKEVGRPAEREDSLDEYQDASPFLHQPDSEVGAAVAHKSDFSIEEIKNLDSVSPAASVAANEISVEMDGVSKDQLSGQPNMTNLSGESIVGKEVEPTVMLESSDEFSVNVHSDNTYIVDSKPDKTSEFIGDVNGSTSFISDLTSQSTSPIMVESLMEDSMDALHIISEVSPSLEEKAGSANAESVTENSRIDFVQTEDQLKLTNAVNTLTDCSSQYKCVKDTLDAQLPVENPFLGNSVCSLDGHQSDHVVTNMDSMWGSDDEDICSEGIKAKGSELGFSCEENPQHVELVDKADENPSVEKPNGLSEEVVCSKEIGPEVPIIGQVSASQHVALLMDQVSTKNPFILDDTRSDDLFELPTENYHSEAQNVAESKLQVDFTPLPLDQLIIVDQTSIAEGQQFVISGDRVPAISSTCGNEPAVGTEDVSVSSTSDPAKNISLHDASVNNSRQEDGEPTSGINFVPSEVFLPAEFSTMPTSQDINALKNDGNEKTPLEDISTKDMTASLSEDNVEEKKETEGTSVKEMNSILKADNVEEEKLTDDTSAERNAMQHIDDAEKKQAADTVSRETSALQNIEERENVEGTGAKGVPAVGSLENADAENQTEDTSAKTECKSDNADNKKQSYDTSTEEMNAKNQAQDTSSKEMNTIQNTSNAEEKNQTEDPAVQEGNKQKEGISPTVAKQSSERVHVPLKVLLAEASVETKEKKTTAKERVLSFRRRVSKDDSSSAKSGSPKPGADDNKFWSSPARLPENNAEKKSKARKQPWMPFICCHSVH*