Information report for bc15;OsCTL1
Gene Details
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Functional Descriptions
- Mutation of BC15/OsCTL1 causes reduced cellulose content and mechanical strength without obvious alterations in plant growth.
- Investigation of the global expression profile of wild-type and bc15 plants, using Illumina RNA sequencing, further suggested a possible mechanism by which BC15/OsCTL1 mediates cellulose biosynthesis and cell wall remodeling.
- In this study, we report the isolation of a brittle culm mutant, bc15, and the map-based cloning of the BC15/OsCTL1 (for chitinase-like1) gene affected in the mutant.
Literature and News
Gene Resources
- UniProt: Q0J0L1
- EMBL: AP014965
- AlphaFoldDB: Q0J0L1
- EnsemblPlants: Os09t0494200-01, Os09t0494200-02
- Gramene: Os09t0494200-01, Os09t0494200-02
- KEGG: osa:4347451
- Orthologous matrix: ECSWWSK
- InterPro: IPR000726, IPR016283, IPR023346
- PANTHER: PTHR22595, PTHR22595:SF207
- SUPFAM: SSF53955
- Gene3D: 1.10.530.10, 3.30.20.10
- OrthoDB: Q0J0L1
- SWISS-MODEL: Q0J0L1
- Conserved Domain Database: cd00325
- eggNOG: KOG4742
Sequences
cDNA Sequence
- >LOC_Os09g32080.2
GACACACACAACGGCAACGTCTTACCAGCTCGGAGCTCTCTCGCTTGCTGCCTCTTCTCTTCTTCCTCCCGCCACCGACACCACCTCCACCAGCAGCTTCGCCTTCGCCGCGTCGGCATCTGCAGTTGCCACTTCGCTTTCTTCCACTCCCTCCTCCTCCTCGCTTACCTCACACTCCTCCCCCCCAATTTCATCCCCCACCCACCACCAGATCCCCCACCACCTGCCGCATTCTCCCCCCCAAGATCCAGATCGCCGGTCACCCCCACGAACTCGCTCGAGATCCAGAGAGAGAGAGAGAGGCAGTTTCTTGGTTGATTTTCGAGGATGAAGAGGAAGACTCGGAACAAGATAATCCTGACGACGCTGCTGGTGTCGGCGGCGGCGATCCTGATCGGCGGGACGGTGGCGCTGATCCTGACGGCGGGGACATGGAAGGTGAAGATGAAGGAGTCGCGCGAGAAGATCTGCGACAAGGGGTGGGAGTGCTCGGGTAGCAAGTACTGCTGCAACGACACCATCACCGACTTCTTCAAGGTGTACCAGTTCGAGAACCTCTTCTCCAAGCGCAACAGCCCCGTCGCCCACGCCGTCGGCTTCTGGGACTACCAGTCCTTCATCACCGCCGCCGCCCTCTTCGAGCCCCTCGGCTTCTGCACCACCGGCGGCAAGCAGATGCAGATGATGGAGCTCTGCGCCTTCCTCGGCCATGTCGGCTCCAAGACCTCATGTGGATTTGGTGTGGCGACCGGCGGGCCGACGGCGTGGGGGCTCTGCTACAACCACGAGATGAGCCCTAAGGAGGATTACTGCGACAAGACGAACCTGCAGTATCCCTGCGTCGAGGGCGCCGAGTACTACGGCCGCGGCGCCATCCCCGTCTTCTGGAACTACAACTATGGCGCGGCGGGCGACGGGATACACGAGGACCTGCTCCACCACCCGGAGTACCTGGAGCAGAACGCGACGATGGCGTTCATGGCGGCGATGTGGCGGTGGATGACGCCGATGAAGAAGAAGCAGCCGTCGGCGCACGACGTGTTCGTGGGCAACTGGAAGCCCACCAAGAACGACACGCTCGCCAAGCGCCTCCCCGGGTTCGGCGCCACCATGAACGTGCTCTACGGCGACCAGATCTGCGGCAAGGGCTACATCGACGACATGAACGTCATCATCTCGCACTACCAGTACTACCTCGACCTCATGGGCGTCGGCCGCGAGCACTCCGGCGACAACCGCGACTGCGCCGAGCAGGCCGCCTTCAACCCCTCCTACAAGAAGCCCGACGATCAGCAGCAACAAAGCTAGAACAGATCACCCCCAATTCCCCCCAATTCCACGATTAACGGATTCTTCATCAGTGTGAGGAGCTGTGGTTTGCATTGGTGTATTTCTGAGTAGCGGATTTTGAGGGAAGTGTCAACTGTGTGTGTGATGCCTATGGGATTTGGGAAATTTGTTGTAGCCCTTGTTGTACCATAGTGTACATTTTCATTCCATTTGATTTTTGTCACATATACATGTTTAAAGAGGAGGATTCAGGATAAACATACCATGATTTTGATGAGCTTGCTGTGTATCTGTTATTGAGGTGTGTGTAGCTGTTTAGCATGCATGCAATAGTTTTCATGCATCAGTGCGTGATAATGCTGTGTGTCATAATTTGGGCTGGGTAAAAATACTCAGTCCTCAGTTACTTCTCGCTATTGATCTTTCAGCTTTGATC - >LOC_Os09g32080.1
GACACACACAACGGCAACGTCTTACCAGCTCGGAGCTCTCTCGCTTGCTGCCTCTTCTCTTCTTCCTCCCGCCACCGACACCACCTCCACCAGCAGCTTCGCCTTCGCCGCGTCGGCATCTGCAGTTGCCACTTCGCTTTCTTCCACTCCCTCCTCCTCCTCGCTTACCTCACACTCCTCCCCCCCAATTTCATCCCCCACCCACCACCAGATCCCCCACCACCTGCCGCATTCTCCCCCCCAAGATCCAGATCGCCGGTCACCCCCACGAACTCGCTCGAGATCCAGAGAGAGAGAGAGAGGCAGTTTCTTGGTTGATTTTCGAGGATGAAGAGGAAGACTCGGAACAAGATAATCCTGACGACGCTGCTGGTGTCGGCGGCGGCGATCCTGATCGGCGGGACGGTGGCGCTGATCCTGACGGCGGGGACATGGAAGGTGAAGATGAAGGAGTCGCGCGAGAAGATCTGCGACAAGGGGTGGGAGTGCTCGGGTAGCAAGTACTGCTGCAACGACACCATCACCGACTTCTTCAAGGTGTACCAGTTCGAGAACCTCTTCTCCAAGCGCAACAGCCCCGTCGCCCACGCCGTCGGCTTCTGGGACTACCAGTCCTTCATCACCGCCGCCGCCCTCTTCGAGCCCCTCGGCTTCTGCACCACCGGCGGCAAGCAGATGCAGATGATGGAGCTCTGCGCCTTCCTCGGCCATGTCGGCTCCAAGACCTCATGTGGATTTGGTGTGGCGACCGGCGGGCCGACGGCGTGGGGGCTCTGCTACAACCACGAGATGAGCCCTAAGGAGGATTACTGCGACAAGACGAACCTGCAGTATCCCTGCGTCGAGGGCGCCGAGTACTACGGCCGCGGCGCCATCCCCGTCTTCTGGAACTACAACTATGGCGCGGCGGGCGACGGGATACACGAGGACCTGCTCCACCACCCGGAGTACCTGGAGCAGAACGCGACGATGGCGTTCATGGCGGCGATGTGGCGGTGGATGACGCCGATGAAGAAGAAGCAGCCGTCGGCGCACGACGTGTTCGTGGGCAACTGGAAGCCCACCAAGAACGACACGCTCGCCAAGCGCCTCCCCGGGTTCGGCGCCACCATGAACGTGCTCTACGGCGACCAGATCTGCGGCAAGGGCTACATCGACGACATGAACGTCATCATCTCGCACTACCAGTACTACCTCGACCTCATGGGCGTCGGCCGCGAGCACTCCGGCGACAACCGCGACTGCGCCGAGCAGGCCGCCTTCAACCCCTCCTACAAGAAGCCCGACGATCAGCAGCAACAAAGCTAGAACAGATCACCCCCAATTCCCCCCAATTCCACGATTAACGGATTCTTCATCAGTGTGAGGAGCTGTGGTTTGCATTGGTGTATTTCTGAGTAGCGGATTTTGAGGGAAGTGTCAACTGTGTGTGTGATGCCTATGGGATTTGGGAAATTTGTTGTAGCCCTTGTTGTACCATAGTGTACATTTTCATTCCATTTGATTTTTGTCACATATACATGTTTAAAGAGGAGGATTCAGGATAAACATACCATGATTTTGATGAGCTTGCTGTGTATCTGTTATTGAGGTGTGTGTAGCTGTTTAGCATGCATGCAATAGTTTTCATGCATCAGTGCGTGATAATGCTGTGTGTCATAATTTGGGCTGGGTAAAAATACTCAGTCCTCAGTTACTTCTCGCTATTGATCTTTCAGCTTTGATC
CDS Sequence
- >LOC_Os09g32080.2
ATGAAGAGGAAGACTCGGAACAAGATAATCCTGACGACGCTGCTGGTGTCGGCGGCGGCGATCCTGATCGGCGGGACGGTGGCGCTGATCCTGACGGCGGGGACATGGAAGGTGAAGATGAAGGAGTCGCGCGAGAAGATCTGCGACAAGGGGTGGGAGTGCTCGGGTAGCAAGTACTGCTGCAACGACACCATCACCGACTTCTTCAAGGTGTACCAGTTCGAGAACCTCTTCTCCAAGCGCAACAGCCCCGTCGCCCACGCCGTCGGCTTCTGGGACTACCAGTCCTTCATCACCGCCGCCGCCCTCTTCGAGCCCCTCGGCTTCTGCACCACCGGCGGCAAGCAGATGCAGATGATGGAGCTCTGCGCCTTCCTCGGCCATGTCGGCTCCAAGACCTCATGTGGATTTGGTGTGGCGACCGGCGGGCCGACGGCGTGGGGGCTCTGCTACAACCACGAGATGAGCCCTAAGGAGGATTACTGCGACAAGACGAACCTGCAGTATCCCTGCGTCGAGGGCGCCGAGTACTACGGCCGCGGCGCCATCCCCGTCTTCTGGAACTACAACTATGGCGCGGCGGGCGACGGGATACACGAGGACCTGCTCCACCACCCGGAGTACCTGGAGCAGAACGCGACGATGGCGTTCATGGCGGCGATGTGGCGGTGGATGACGCCGATGAAGAAGAAGCAGCCGTCGGCGCACGACGTGTTCGTGGGCAACTGGAAGCCCACCAAGAACGACACGCTCGCCAAGCGCCTCCCCGGGTTCGGCGCCACCATGAACGTGCTCTACGGCGACCAGATCTGCGGCAAGGGCTACATCGACGACATGAACGTCATCATCTCGCACTACCAGTACTACCTCGACCTCATGGGCGTCGGCCGCGAGCACTCCGGCGACAACCGCGACTGCGCCGAGCAGGCCGCCTTCAACCCCTCCTACAAGAAGCCCGACGATCAGCAGCAACAAAGCTAG - >LOC_Os09g32080.1
ATGAAGAGGAAGACTCGGAACAAGATAATCCTGACGACGCTGCTGGTGTCGGCGGCGGCGATCCTGATCGGCGGGACGGTGGCGCTGATCCTGACGGCGGGGACATGGAAGGTGAAGATGAAGGAGTCGCGCGAGAAGATCTGCGACAAGGGGTGGGAGTGCTCGGGTAGCAAGTACTGCTGCAACGACACCATCACCGACTTCTTCAAGGTGTACCAGTTCGAGAACCTCTTCTCCAAGCGCAACAGCCCCGTCGCCCACGCCGTCGGCTTCTGGGACTACCAGTCCTTCATCACCGCCGCCGCCCTCTTCGAGCCCCTCGGCTTCTGCACCACCGGCGGCAAGCAGATGCAGATGATGGAGCTCTGCGCCTTCCTCGGCCATGTCGGCTCCAAGACCTCATGTGGATTTGGTGTGGCGACCGGCGGGCCGACGGCGTGGGGGCTCTGCTACAACCACGAGATGAGCCCTAAGGAGGATTACTGCGACAAGACGAACCTGCAGTATCCCTGCGTCGAGGGCGCCGAGTACTACGGCCGCGGCGCCATCCCCGTCTTCTGGAACTACAACTATGGCGCGGCGGGCGACGGGATACACGAGGACCTGCTCCACCACCCGGAGTACCTGGAGCAGAACGCGACGATGGCGTTCATGGCGGCGATGTGGCGGTGGATGACGCCGATGAAGAAGAAGCAGCCGTCGGCGCACGACGTGTTCGTGGGCAACTGGAAGCCCACCAAGAACGACACGCTCGCCAAGCGCCTCCCCGGGTTCGGCGCCACCATGAACGTGCTCTACGGCGACCAGATCTGCGGCAAGGGCTACATCGACGACATGAACGTCATCATCTCGCACTACCAGTACTACCTCGACCTCATGGGCGTCGGCCGCGAGCACTCCGGCGACAACCGCGACTGCGCCGAGCAGGCCGCCTTCAACCCCTCCTACAAGAAGCCCGACGATCAGCAGCAACAAAGCTAG
Protein Sequence
- >LOC_Os09g32080.2
MKRKTRNKIILTTLLVSAAAILIGGTVALILTAGTWKVKMKESREKICDKGWECSGSKYCCNDTITDFFKVYQFENLFSKRNSPVAHAVGFWDYQSFITAAALFEPLGFCTTGGKQMQMMELCAFLGHVGSKTSCGFGVATGGPTAWGLCYNHEMSPKEDYCDKTNLQYPCVEGAEYYGRGAIPVFWNYNYGAAGDGIHEDLLHHPEYLEQNATMAFMAAMWRWMTPMKKKQPSAHDVFVGNWKPTKNDTLAKRLPGFGATMNVLYGDQICGKGYIDDMNVIISHYQYYLDLMGVGREHSGDNRDCAEQAAFNPSYKKPDDQQQQS* - >LOC_Os09g32080.1
MKRKTRNKIILTTLLVSAAAILIGGTVALILTAGTWKVKMKESREKICDKGWECSGSKYCCNDTITDFFKVYQFENLFSKRNSPVAHAVGFWDYQSFITAAALFEPLGFCTTGGKQMQMMELCAFLGHVGSKTSCGFGVATGGPTAWGLCYNHEMSPKEDYCDKTNLQYPCVEGAEYYGRGAIPVFWNYNYGAAGDGIHEDLLHHPEYLEQNATMAFMAAMWRWMTPMKKKQPSAHDVFVGNWKPTKNDTLAKRLPGFGATMNVLYGDQICGKGYIDDMNVIISHYQYYLDLMGVGREHSGDNRDCAEQAAFNPSYKKPDDQQQQS*